Pre_GI Gene

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Host: NC_004347 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_004347:103967 Shewanella oneidensis MR-1, complete genome

Host Lineage: Shewanella oneidensis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from Oneida lake in New York, USA. Potential bioremediation organism. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. This organism is a facultative anaerobe that is capable of using a wide variety of terminal electron acceptors during anaerobic respiration which may make it valuable for bioremediation. Since the bacteria can reduce chromium and uranium from the liquid phase to form insoluble compounds, they may be used to eliminate these two environmental pollutants from water.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
103967104674708histidine utilization repressorQuickGO ontologyBLASTP
1048011064711671urocanate hydrataseQuickGO ontologyBLASTP
1065361080771542histidine ammonia-lyaseQuickGO ontologyBLASTP
108703109284582formate dehydrogenase-N nitrate-inducible alpha subunitQuickGO ontologyBLASTP
111720112634915formate dehydrogenase nitrate-inducible iron-sulfur subunitQuickGO ontologyBLASTP
112631113272642formate dehydrogenase nitrate-inducible cytochrome b556 subunitQuickGO ontologyBLASTP
113272114180909fdhE proteinQuickGO ontologyBLASTP
1142381156591422selenocysteine synthaseQuickGO ontologyBLASTP
1156561176772022selenocysteine-specific translation elongation factorQuickGO ontologyBLASTP
117785118621837formate dehydrogenase accessory protein FdhDQuickGO ontologyBLASTP
1187471199611215hypothetical transporter componentQuickGO ontologyBLASTP
119961120194234hypothetical proteinBLASTP
1202871216301344hypothetical proteaseQuickGO ontologyBLASTP
121746122360615hypothetical protein
122642123265624hypothetical proteinBLASTP
123266124222957hypothetical proteinBLASTP
124394125005612hypothetical protein
125325126302978hypothetical proteinBLASTP