Pre_GI: BLASTP Hits

Some Help

Query: NC_015957:7348269:7395818 Streptomyces violaceusniger Tu 4113 chromosome, complete genome

Start: 7395818, End: 7396717, Length: 900

Host Lineage: Streptomyces violaceusniger; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Environment: Soil, Terrestrial; Temp: Mesophile. Streptomyces violaceusniger 16S rRNA gene clade form a gray aerial spore mass and a grayish-yellow substrate mycelium on oatmeal agar, and produce aerial hyphae that differentiate into spiral chains of rugose ornamented spores. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009664:63230:832028320284113912Kineococcus radiotolerans SRS30216, complete genometranscriptional regulator, LysR family4e-60231
NC_011365:1865687:189835118983511899322972Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeLysR family transcriptional regulator1e-41170
NC_020211:103371:126887126887127789903Serratia marcescens WW4, complete genomeLysR family transcriptional regulator3e-38159
NC_010338:588000:591892591892592821930Caulobacter sp. K31, complete genometranscriptional regulator, LysR family6e-38157
NC_020181:1317647:131764713176471318570924Enterobacter aerogenes EA1509E, complete genomeTranscriptional regulator, LysR family2e-35149
NC_015138:272500:274941274941275930990Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeLysR family transcriptional regulator3e-32139
NC_011365:1865687:188826518882651889218954Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeLysR family transcriptional regulator2e-31136
NC_010125:1011430:101697210169721017925954Gluconacetobacter diazotrophicus PAl 5, complete genomeputative transcriptional regulator, LysR family3e-31135
NC_016027:2512297:2523752252375225248161065Gluconacetobacter xylinus NBRC 3288, complete genomeLysR family transcriptional regulator2e-30132
NC_011283:785973:800657800657801586930Klebsiella pneumoniae 342 chromosome, complete genomeLysR family transcriptional regulator4e-28125
NC_018691:4619245:462260946226094623520912Alcanivorax dieselolei B5 chromosome, complete genomeTranscriptional regulator, LysR family4e-26118
NC_008752:166877:1820701820701833681299Acidovorax avenae subsp. citrulli AAC00-1, complete genometranscriptional regulator, LysR family4e-24112
NC_015138:201323:211862211862212773912Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeLysR family transcriptional regulator4e-23108
NC_013592:2338403:235105423510542351965912Dickeya dadantii Ech586, complete genometranscriptional regulator, LysR family5e-22105
NC_007511:3512100:352254135225413523473933Burkholderia sp. 383 chromosome 2, complete sequencetranscriptional regulator, LysR family8e-22104
NC_015709:1459838:148508714850871486001915Zymomonas mobilis subsp. pomaceae ATCC 29192 chromosome, completeLysR family transcriptional regulator6e-22104
NC_011000:2732330:279787027978702798769900Burkholderia cenocepacia J2315 chromosome 1, complete sequenceLysR family regulatory protein2e-21103
NC_017986:5833819:583514258351425836062921Pseudomonas putida ND6 chromosome, complete genomeNahR4e-21102
NC_011365:502620:505292505292506218927Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeLysR family transcriptional regulator7e-21101
NC_010125:2295500:229847122984712299397927Gluconacetobacter diazotrophicus PAl 5, complete genomeputative transcriptional Regulator, LysR family7e-21101
NC_008781:2611702:262742326274232628379957Polaromonas naphthalenivorans CJ2, complete genometranscriptional regulator, LysR family8e-2097.8
NC_010505:5035668:504944150494415050385945Methylobacterium radiotolerans JCM 2831, complete genometranscriptional regulator, LysR family1e-1997.4
NC_010943:1332243:133936213393621340264903Stenotrophomonas maltophilia K279a, complete genomeputative LysR family transcriptional regulator3e-1996.3
NC_010505:2530476:2551319255131925523201002Methylobacterium radiotolerans JCM 2831, complete genometranscriptional regulator, LysR family4e-1995.5
NC_009436:3807420:381830238183023819228927Enterobacter sp. 638, complete genomeLysR family transcriptional regulator6e-1994.7
NC_008782:3252092:325901532590153259920906Acidovorax sp. JS42, complete genometranscriptional regulator, LysR family1e-1894
NC_012988:5516872:553280755328075533766960Methylobacterium extorquens DM4, complete genomeLysR family transcriptional regulator1e-1894
NC_010172:5036385:504634750463475047306960Methylobacterium extorquens PA1, complete genomeLysR substrate-binding2e-1893.6
NC_011000:3362382:337903133790313379969939Burkholderia cenocepacia J2315 chromosome 1, complete sequenceLysR family regulatory protein2e-1893.6
NC_010557:679656:712468712468713370903Burkholderia ambifaria MC40-6 chromosome 3, complete sequencetranscriptional regulator, LysR family3e-1892.8
NC_008392:1029134:104404010440401044942903Burkholderia cepacia AMMD chromosome 3, complete sequencetranscriptional regulator, LysR family3e-1892.8
NC_014641:20103:410434104341975933Achromobacter xylosoxidans A8 plasmid pA81, complete sequenceHTH-type transcriptional activator NahR 37e-1891.3
NC_021066:4177217:418936241893624190264903Raoultella ornithinolytica B6, complete genomeputative transcriptional regulator2e-1789.7
NC_003296:262118:276258276258277172915Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePROBABLE TRANSCRIPTION REGULATOR PROTEIN2e-1687
NC_015381:1705383:170681117068111707734924Burkholderia gladioli BSR3 chromosome 1, complete sequence2e-1686.3
NC_009937:311242:314202314202315176975Azorhizobium caulinodans ORS 571, complete genomeputative transcriptional regulator9e-1684.3
NC_007712:3629358:364621536462153646823609Sodalis glossinidius str. 'morsitans', complete genomeputative transcriptional regulator1e-1584
NC_015663:3466471:348000034800003480920921Enterobacter aerogenes KCTC 2190 chromosome, complete genomeLysR family transcriptional regulator2e-1583.2
NC_015727:1357095:137833313783331379250918Cupriavidus necator N-1 plasmid BB1p, complete sequenceLysR family transcriptional regulator5e-1582
NC_015711:3546500:356156035615603562501942Myxococcus fulvus HW-1 chromosome, complete genomeLysR family transcripitonal regulator7e-1581.3
NC_014641:20103:310553105531963909Achromobacter xylosoxidans A8 plasmid pA81, complete sequencebacterial regulatory helix-turn-helix protein, LysR family protein 2038e-1581.3
NC_013446:2130021:214234221423422143295954Comamonas testosteroni CNB-2, complete genometranscriptional regulator, LysR family1e-1480.5
NC_009524:861500:878447878447879355909Psychrobacter sp. PRwf-1 chromosome, complete genomeLysR family transcriptional regulator2e-1479.7
NC_008786:5128363:513497951349795135926948Verminephrobacter eiseniae EF01-2, complete genometranscriptional regulator, LysR family2e-1479.7
NC_006569:370846:381777381777382751975Silicibacter pomeroyi DSS-3 megaplasmid, complete sequencetranscriptional regulator, LysR family3e-1479.3
NC_015424:2316228:231775323177532318688936Aeromonas veronii B565 chromosome, complete genomeLysR family transcriptional regulator4e-1479
NC_013446:2919005:293064129306412931594954Comamonas testosteroni CNB-2, complete genometranscriptional regulator, LysR family4e-1479
NC_008392:1029134:106160010616001062565966Burkholderia cepacia AMMD chromosome 3, complete sequencetranscriptional regulator, LysR family1e-1377.4
NC_009439:3535152:354860435486043549542939Pseudomonas mendocina ymp, complete genomeLysR family transcriptional regulator1e-1377
NC_014012:1421979:142218014221801423097918Shewanella violacea DSS12, complete genometranscriptional regulator, LysR family2e-1377
NC_006371:1411335:144096814409681441873906Photobacterium profundum SS9 chromosome 2, complete sequencehypothetical transcriptional regulator, LysR family2e-1376.6
NC_017986:5467279:547918954791895480121933Pseudomonas putida ND6 chromosome, complete genomeLysR family transcriptional regulator3e-1376.3
NC_015379:4249238:426468542646854265602918Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative Transcription factor, LysR family4e-1375.5
NC_014013:112008:129080129080130036957Sphingobium japonicum UT26S chromosome 2, complete genomeLysR-family transcriptional regulator4e-1375.5
NC_007645:3756654:375780337578033758747945Hahella chejuensis KCTC 2396, complete genomeTranscriptional regulator5e-1375.1
NC_010524:4402478:442545844254584426423966Leptothrix cholodnii SP-6, complete genometranscriptional regulator, LysR family6e-1375.1
NC_004129:3452885:348876534887653489682918Pseudomonas fluorescens Pf-5, complete genometranscriptional regulator, LysR family7e-1374.7
NC_009512:3068495:307157930715793072511933Pseudomonas putida F1, complete genometranscriptional regulator, LysR family8e-1374.7
NC_015376:903939:913862913862914785924Burkholderia gladioli BSR3 chromosome chromosome 2, completetranscriptional regulator, LysR family1e-1273.9
NC_016830:2642881:264642726464272647344918Pseudomonas fluorescens F113 chromosome, complete genomeLysR family transcriptional regulator3e-1272.8
NC_009656:4079319:408279240827924083724933Pseudomonas aeruginosa PA7 chromosome, complete genomeLysR family transcriptional regulator4e-1272.4
NC_014217:4550544:458732945873294588243915Starkeya novella DSM 506 chromosome, complete genometranscriptional regulator, LysR family6e-1271.6
NC_007952:3196085:322589732258973226814918Burkholderia xenovorans LB400 chromosome 2, complete sequenceTranscriptional regulator, LysR family2e-1170.1
NC_010625:1602191:162819216281921629166975Burkholderia phymatum STM815 plasmid pBPHY01, complete sequencetranscriptional regulator, LysR family2e-1170.1
NC_014623:1883259:189844618984461899354909Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeLysR family transcriptional regulator2e-1169.7
NC_010623:1961685:196825519682551969184930Burkholderia phymatum STM815 chromosome 2, complete sequencetranscriptional regulator, LysR family3e-1169.3
NC_020209:1986503:200880320088032009744942Pseudomonas poae RE*1-1-14, complete genomeLysR family transcription regulator protein5e-1168.6
NC_012912:4167429:417109541710954172015921Dickeya zeae Ech1591, complete genometranscriptional regulator, LysR family5e-1168.6
NC_004603:1464000:146748614674861468466981Vibrio parahaemolyticus RIMD 2210633 chromosome I, completetranscriptional regulator, LysR family2e-1067
NC_011184:597496:615775615775616707933Vibrio fischeri MJ11 chromosome I, complete sequencetranscriptional regulator, LysR family2e-1066.6
NC_009439:2427120:243460724346072435509903Pseudomonas mendocina ymp, complete genomeLysR family transcriptional regulator2e-1066.6
NC_007511:3512100:353444735344473535373927Burkholderia sp. 383 chromosome 2, complete sequencetranscriptional regulator, LysR family2e-1066.6
NC_015733:2720183:273520827352082736122915Pseudomonas putida S16 chromosome, complete genomeLysR family transcriptional regulator3e-1065.9
NC_008061:2368517:239821323982132399139927Burkholderia cenocepacia AU 1054 chromosome 2, complete sequencetranscriptional regulator, LysR family4e-1065.9
NC_012796:3374911:338169533816953382615921Desulfovibrio magneticus RS-1, complete genomehypothetical protein4e-1065.5
NC_015138:3160764:316968131696813170574894Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeLysR family transcriptional regulator9e-1064.7
NC_018678:87064:107354107354108277924Alteromonas macleodii str. 'English Channel 673' chromosome,LysR family transcriptional regulator1e-0964.3
NC_009648:4497749:451456145145614515520960Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeDNA-binding transcriptional regulator YidZ1e-0963.9
NC_010581:2999002:299900229990022999895894Beijerinckia indica subsp. indica ATCC 9039, complete genometranscriptional regulator, LysR family1e-0963.9
NC_015379:3736500:373842937384293739343915Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative Transcription factor, LysR family2e-0963.5
NC_016830:1645879:166625916662591667191933Pseudomonas fluorescens F113 chromosome, complete genomeLysR family transcriptional regulator2e-0963.2
NC_016830:3230939:325379932537993254713915Pseudomonas fluorescens F113 chromosome, complete genomeprotein MexT3e-0962.8
NC_014121:2090630:210224621022462103172927Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completebacterial regulatory protein, LysR3e-0962.8
NC_002947:4167500:417027541702754171180906Pseudomonas putida KT2440, complete genometranscriptional regulator, LysR family5e-0962
NC_002655:4747926:475045547504554751414960Escherichia coli O157:H7 EDL933, complete genomeputative transcriptional regulator LYSR-type7e-0961.6
NC_013941:4567820:456897045689704569929960Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeDNA-binding transcriptional regulator YidZ8e-0961.2
NC_013008:4738083:474061247406124741571960Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeDNA-binding transcriptional regulator YidZ8e-0961.2
NC_011353:4782040:478456947845694785528960Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeDNA-binding transcriptional regulator YidZ8e-0961.2
NC_002695:4678945:468147446814744682433960Escherichia coli O157:H7 str. Sakai, complete genomeputative transcriptional regulator LYSR-type8e-0961.2
NC_013446:2961647:296904529690452969968924Comamonas testosteroni CNB-2, complete genometranscriptional regulator, LysR family1e-0860.8
NC_015968:2195645:222627322262732227205933Enterobacter asburiae LF7a chromosome, complete genomeLysR family transcriptional regulator1e-0860.8
NC_015376:2241000:225434222543422255334993Burkholderia gladioli BSR3 chromosome chromosome 2, completetranscriptional regulator MexT2e-0860.1
NC_018531:1900619:193350719335071934448942Arthrobacter sp. Rue61a chromosome, complete genomeLysR family transcriptional regulator4e-0858.9
NC_009512:3251545:327571832757183276020303Pseudomonas putida F1, complete genometranscriptional regulator, LysR family4e-0858.9
NC_007953:938346:945917945917946852936Burkholderia xenovorans LB400 chromosome 3, complete sequenceTranscriptional regulator, LysR family4e-0858.9
NC_019973:5989816:599273559927355993718984Mesorhizobium australicum WSM2073, complete genometranscriptional regulator6e-0858.5
NC_014923:6060859:606377860637786064761984Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completeLysR substrate-binding protein6e-0858.5
NC_015675:6615245:661844666184466619429984Mesorhizobium opportunistum WSM2075 chromosome, complete genomeLysR family transcriptional regulator6e-0858.5
NC_010511:4258000:427139842713984272324927Methylobacterium sp. 4-46 chromosome, complete genomeLysR family transcriptional regulator6e-0858.2
NC_014966:328056:347027347027347971945Vibrio vulnificus MO6-24/O chromosome II, complete sequencelysR-family transcriptional regulator7e-0858.2
NC_005140:340000:359000359000359944945Vibrio vulnificus YJ016 chromosome II, complete sequencetranscriptional regulator7e-0858.2
NC_011750:4490573:449310344931034494062960Escherichia coli IAI39 chromosome, complete genomeDNA-binding transcriptional regulator YidZ8e-0858.2
NC_010498:4166903:416943341694334170392960Escherichia coli SMS-3-5, complete genomeLysR family transcriptional regulator8e-0858.2
NC_004460:1618892:163372816337281634660933Vibrio vulnificus CMCP6 chromosome II, complete sequenceTranscriptional regulator, LysR family1e-0757.8
NC_011751:4373961:437649143764914377450960Escherichia coli UMN026 chromosome, complete genomeDNA-binding transcriptional regulator YidZ8e-0857.8
NC_004463:2158116:218239221823922183336945Bradyrhizobium japonicum USDA 110, complete genometranscriptional regulatory protein2e-0756.6
NC_016514:1183356:119434011943401195299960Enterobacter cloacae EcWSU1 chromosome, complete genomePCP degradation transcriptional activation protein3e-0756.2
CP002185:1493280:149328014932801494188909Escherichia coli W, complete genomepredicted DNA-binding transcriptional regulator3e-0756.2
NC_017249:7993713:809553280955328096425894Bradyrhizobium japonicum USDA 6, complete genometranscriptional regulator7e-0755.1
NC_008314:2611873:262641726264172627310894Ralstonia eutropha H16 chromosome 2, complete sequencetranscriptional regulator, LysR-family7e-0754.7
NC_009997:2069894:208252920825292083422894Shewanella baltica OS195, complete genometranscriptional regulator, LysR family3e-0653.1
NC_016901:2070121:208311620831162084009894Shewanella baltica OS678 chromosome, complete genomeLysR family transcriptional regulator3e-0653.1
NC_013739:2057781:2076477207647720775081032Conexibacter woesei DSM 14684, complete genometranscriptional regulator, LysR family2e-0653.1
NC_015514:3351052:335105233510523351984933Cellulomonas fimi ATCC 484 chromosome, complete genomeLysR family transcriptional regulator3e-0652.8
NC_009439:1297851:130384013038401304802963Pseudomonas mendocina ymp, complete genomeLysR family transcriptional regulator3e-0652.8
NC_016830:1645879:166486316648631665786924Pseudomonas fluorescens F113 chromosome, complete genomeLysR family transcriptional regulator5e-0652
NC_009831:2045811:205374920537492054660912Shewanella sediminis HAW-EB3, complete genometranscriptional regulator, LysR family5e-0652
NC_016613:2759908:276659327665932767510918Vibrio sp. EJY3 chromosome 1, complete sequenceLysR family transcriptional regulator6e-0652
NC_014311:3348102:336671533667153367680966Ralstonia solanacearum PSI07 chromosome, complete genomeHTH-type transcriptional regulator syrM 17e-0651.6