Pre_GI: BLASTP Hits

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Query: NC_014624:2569604:2580185 Eubacterium limosum KIST612 chromosome, complete genome

Start: 2580185, End: 2580961, Length: 777

Host Lineage: Eubacterium limosum; Eubacterium; Eubacteriaceae; Clostridiales; Firmicutes; Bacteria

General Information: Eubacterium limosum KIST612 is an acetogenic bacterium isolated from an anaerobic digester and has a high growth rate on synthesis gas (CO; carbon monoxide) using it as a sole energy source. This organism produces acetate as well as butyrate and ethanol as fermentation products from syngas. Therefore, E. limosum KIST612 has been considered for a model strain for bioenergy production from syngas (obtained from biomass).




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016584:2244966:227049422704942271303810Desulfosporosinus orientis DSM 765 chromosome, complete genometranscriptional regulator2e-62239
NC_017179:4023139:405294840529484053760813Clostridium difficile BI1, complete genomeMerR family transcriptional regulator4e-39161
NC_013315:4015119:404492840449284045740813Clostridium difficile CD196 chromosome, complete genomeMerR family transcriptional regulator4e-39161
NC_013316:4095905:412571441257144126526813Clostridium difficile R20291, complete genomeMerR-family transcriptional regulator4e-39161
NC_011898:3159411:317709831770983177919822Clostridium cellulolyticum H10, complete genometranscriptional regulator, MerR family1e-27123
NC_009077:5286275:528973352897335290563831Mycobacterium sp. JLS, complete genomeputative transcriptional regulator, MerR family4e-21102
NC_016048:797762:800661800661801476816Oscillibacter valericigenes Sjm18-20, complete genomeputative MerR family transcriptional regulator2e-1892.8
NC_016048:4163225:419321241932124194036825Oscillibacter valericigenes Sjm18-20, complete genomeputative MerR family transcriptional regulator5e-1891.7
NC_013757:2630000:263326726332672634079813Geodermatophilus obscurus DSM 43160, complete genometranscriptional regulator, MerR family1e-1686.7
NC_010723:1465097:146844114684411469277837Clostridium botulinum E3 str. Alaska E43, complete genometranscriptional regulatory protein4e-1685.1
NC_014221:792363:806617806617807441825Truepera radiovictrix DSM 17093 chromosome, complete genometranscriptional regulator, MerR family3e-1582.4
NC_010674:1496500:149822114982211499057837Clostridium botulinum B str. Eklund 17B, complete genometranscriptional regulatory protein4e-1582
NC_009338:955195:975815975815976687873Mycobacterium gilvum PYR-GCK chromosome, complete genomeMerR family transcriptional regulator3e-1479.3
NC_016584:4325964:432874343287434329555813Desulfosporosinus orientis DSM 765 chromosome, complete genometranscriptional regulator8e-1477.4
NC_013595:196493:218127218127218915789Streptosporangium roseum DSM 43021, complete genomeputative transcriptional regulator, MerR family7e-1374.3
NC_016582:4934854:494056949405694941468900Streptomyces bingchenggensis BCW-1 chromosome, complete genomeputative transcriptional regulator, MerR family protein5e-1271.6
UCMB5137:3660165:367585036758503676662813Bacillus atrophaeus UCMB-5137putative transcriptional regulator of efflux transporter8e-1270.9
NC_013169:2104597:210911721091172109950834Kytococcus sedentarius DSM 20547, complete genomepredicted transcriptional regulator5e-1168.2
NC_016633:14000:202342023420998765Sphaerochaeta pleomorpha str. Grapes chromosome, complete genomeputative transcriptional regulator5e-1065.1
NC_010001:1745089:175040017504001751233834Clostridium phytofermentans ISDg, complete genometranscriptional regulator, MerR family7e-1064.3
NC_009698:2171151:219123921912392192069831Clostridium botulinum A str. Hall chromosome, complete genomeMerR family transcriptional regulator2e-0963.2
NC_009697:2173000:219102021910202191850831Clostridium botulinum A str. ATCC 19397 chromosome, completeMerR family transcriptional regulator2e-0963.2
NC_009495:2244774:226237822623782263208831Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeMerR family transcriptional regulator2e-0963.2
NC_010723:1379256:138162413816241382097474Clostridium botulinum E3 str. Alaska E43, complete genomeMerR-family transcriptional regulator1e-0860.5
NC_013406:3672857:371383337138333714651819Paenibacillus sp. Y412MC10 chromosome, complete genomeMerR family transcriptional regulator1e-0860.5
NC_004557:1553000:156846115684611569303843Clostridium tetani E88, complete genometranscriptional regulatory protein2e-0860.1
NC_011312:3060371:307927830792783079697420Aliivibrio salmonicida LFI1238 chromosome chromosome 1, completetranscriptional regulator3e-0858.9
NC_009699:1122000:114293611429361143757822Clostridium botulinum F str. Langeland chromosome, complete genomeMerR family transcriptional regulator9e-0857.4
NC_014910:242845:259708259708260163456Alicycliphilus denitrificans BC chromosome, complete genomecd(ii)/pb(ii)-responsive transcriptional regulator1e-0757.4
NC_015146:144565:162656162656163048393Arthrobacter phenanthrenivorans Sphe3 plasmid pASPHE301, completetranscriptional regulator2e-0756.6
NC_009434:695582:762792762792763244453Pseudomonas stutzeri A1501, complete genometranscriptional regulator CadR2e-0756.6
NC_016627:3158353:317921431792143180050837Clostridium clariflavum DSM 19732 chromosome, complete genomeputative transcriptional regulator2e-0756.2
NC_015690:1818333:189300718930071893480474Paenibacillus mucilaginosus KNP414 chromosome, complete genomeMerR family transcriptional regulator3e-0755.8
NC_016935:2347691:242275624227562423229474Paenibacillus mucilaginosus 3016 chromosome, complete genomeMerR family transcriptional regulator3e-0755.8
NC_009089:4177117:418251841825184183375858Clostridium difficile 630, complete genomeMerR-family transcriptional regulator3e-0755.8
NC_016627:2593242:259685025968502597614765Clostridium clariflavum DSM 19732 chromosome, complete genomeputative transcriptional regulator3e-0755.8
NC_013315:3978495:398005339800533980910858Clostridium difficile CD196 chromosome, complete genomeMerR family transcriptional regulator3e-0755.8
NC_017179:3984000:398807339880733988930858Clostridium difficile BI1, complete genomeMerR family transcriptional regulator3e-0755.8
NC_013552:1240073:125037812503781250806429Dehalococcoides sp. VS, complete genometranscriptional regulator MerR family CueR domain protein4e-0755.5
NC_015957:2781740:2788861278886127899131053Streptomyces violaceusniger Tu 4113 chromosome, complete genomeMerR family transcriptional regulator4e-0755.5
NC_008261:381297:395023395023395772750Clostridium perfringens ATCC 13124, complete genomeputative transcriptional activator tipA5e-0755.1
NC_016641:3058571:307297930729793073785807Paenibacillus terrae HPL-003 chromosome, complete genomeMerR family transcriptional regulator5e-0755.1
NC_011662:2374955:238002023800202380475456Thauera sp. MZ1T, complete genometranscriptional regulator, MerR family4e-0755.1
NC_008529:887008:914122914122914553432Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completePredicted transcriptional regulator7e-0754.7
NC_008529:906576:914122914122914553432Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completePredicted transcriptional regulator7e-0754.7
NC_008529:887008:944865944865945296432Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completePredicted transcriptional regulator7e-0754.7
NC_008529:906576:944865944865945296432Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completePredicted transcriptional regulator7e-0754.7
NC_015216:2422758:242457824245782425042465Methanobacterium sp. AL-21 chromosome, complete genometranscriptional activator ligand binding domain-containing protein6e-0754.7
NC_020418:14965:164191641917276858Morganella morganii subsp. morganii KT, complete genomeTranscriptional regulator, MerR family7e-0754.3
NC_014328:3823902:3823902382390238253171416Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative transcriptional regulator8e-0754.3
NC_008027:5533311:555116655511665551609444Pseudomonas entomophila L48, complete genometranscriptional regulator CadR8e-0754.3
NC_013159:3858425:387858238785823879541960Saccharomonospora viridis DSM 43017, complete genomepredicted transcriptional regulator1e-0653.9
NC_013446:2820000:284846928484692848915447Comamonas testosteroni CNB-2, complete genometranscriptional regulator, MerR family1e-0653.9
NC_013446:2820000:282079828207982821217420Comamonas testosteroni CNB-2, complete genometranscriptional regulator, MerR family1e-0653.9
UCMB5137:3660165:366414436641443664878735Bacillus atrophaeus UCMB-5137hypothetical protein1e-0653.9
NC_008228:2450700:246720024672002467589390Pseudoalteromonas atlantica T6c, complete genometranscriptional regulator, MerR family2e-0653.5
NC_019896:17873:404364043641140705Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completetranscriptional regulator2e-0653.1
NC_011753:3088952:310870531087053109169465Vibrio splendidus LGP32 chromosome 1, complete genometranscriptional regulator2e-0652.8
NC_009668:529175:531374531374531790417Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequenceMerR family transcriptional regulator2e-0652.8
UCMB5137:2054735:207424220742422075075834Bacillus atrophaeus UCMB-5137BmrR protein3e-0652.8
NC_016616:1091606:109800110980011098429429Dechlorosoma suillum PS chromosome, complete genomeCu(I)-responsive transcriptional regulator3e-0652.4
NC_014391:621062:628594628594629046453Micromonospora aurantiaca ATCC 27029 chromosome, complete genomeregulatory protein MerR4e-0652
NC_015660:3518931:355621435562143556987774Geobacillus thermoglucosidasius C56-YS93 chromosome, completeMerR family transcriptional regulator5e-0651.6
NC_011830:2177187:217718721771872178038852Desulfitobacterium hafniense DCB-2, complete genometranscriptional regulator, MerR family5e-0651.6
NC_011830:3025437:303125230312523032007756Desulfitobacterium hafniense DCB-2, complete genometranscriptional regulator, MerR family5e-0651.6
NC_007907:1940000:194411719441171944872756Desulfitobacterium hafniense Y51, complete genomehypothetical protein5e-0651.6
NC_009656:44500:105066105066105476411Pseudomonas aeruginosa PA7 chromosome, complete genomeHg(II)-responsive transcriptional regulator6e-0651.6
NC_014121:1589389:1611582161158216126401059Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completetranscriptional regulator, MerR family/albicidin resistance protein8e-0651.2
NC_015977:2920500:293618029361802936914735Roseburia hominis A2-183 chromosome, complete genomehypothetical protein8e-0651.2
NC_018866:1706000:170750017075001708387888Dehalobacter sp. DCA chromosome, complete genomeputative transcriptional regulator9e-0650.8