Pre_GI Gene

Some Help

Host: NC_013315 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013315:3978495 Clostridium difficile CD196 chromosome, complete genome

Host Lineage: Peptoclostridium difficile; Peptoclostridium; Peptostreptococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolated from a single patient with pseudomembranous colitis in a Paris hospital in 1985. Clostridium difficile, a Gram-positive, spore-forming anaerobic bacterium, is the leading cause of infectious diarrhea among patients in hospitals worldwide, causing C. difficile infection (CDI). An important nosocomial pathogen, it is frequently associated with antibiotic treatment and causes diseases ranging from antibiotic-associated diarrhea to life-threatening pseudomembraneous colitis.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
39784953979367873hypothetical proteinBLASTP
39793673980032666pseudouridylate synthaseQuickGO ontologyBLASTP
39800533980910858MerR family transcriptional regulatorQuickGO ontologyBLASTP
398106639836122547ABC transporter permeaseQuickGO ontologyBLASTP
39836123984298687ABC transporter ATP-binding proteinQuickGO ontologyBLASTP
39843813985370990two-component sensor histidine kinaseQuickGO ontologyBLASTP
39853573986043687two-component response regulatorQuickGO ontologyBLASTP
398654339897493207carbamoyl phosphate synthase large subunitQuickGO ontologyBLASTP
398994239910361095carbamoyl phosphate synthase small subunitQuickGO ontologyBLASTP
399124939944553207carbamoyl phosphate synthase large subunitQuickGO ontologyBLASTP
399450839955511044carbamoyl phosphate synthase small subunitQuickGO ontologyBLASTP
39955773996293717orotidine 5-phosphate decarboxylaseQuickGO ontologyBLASTP
39966693997304636hypothetical proteinBLASTP
39973283998242915hypothetical proteinBLASTP