Pre_GI: BLASTP Hits

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Query: NC_013941:3182576:3190162 Escherichia coli O55:H7 str. CB9615 chromosome, complete genome

Start: 3190162, End: 3190836, Length: 675

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The E. coli O55:H7 strain CB9615 was isolated from an infant with diarrhea in Germany in 2003 and confirmed to belong to the same sequence type (ST11) as the O157:H7 clone by multilocus sequence typing. The O55:H7 and O157:H7 E. coli clones have been shown to be closely related. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_021066:2226826:224423422442342244866633Raoultella ornithinolytica B6, complete genomehypothetical protein3e-70264
NC_016809:389561:394152394152394811660Haemophilus influenzae 10810, complete genomehypothetical protein4e-51201
NC_009348:1663870:166905016690501669733684Aeromonas salmonicida subsp. salmonicida A449, complete genomephage repressor2e-45182
NC_014640:4293430:433149743314974332201705Achromobacter xylosoxidans A8 chromosome, complete genomerepressor protein C2 domain-containing protein1e-37156
NC_015424:2726223:275560227556022756036435Aeromonas veronii B565 chromosome, complete genomephage repressor2e-35149
NC_013446:3034486:304282630428263043365540Comamonas testosteroni CNB-2, complete genomeputative prophage repressor1e-30133
NC_009524:1627414:163576016357601636419660Psychrobacter sp. PRwf-1 chromosome, complete genomeputative prophage repressor8e-31133
NC_008258:269806:287337287337287969633Shigella flexneri 5 str. 8401, complete genomeputative prophage repressor CI1e-29129
NC_016809:1778000:177820117782011778866666Haemophilus influenzae 10810, complete genomehypothetical protein6e-27120
NC_012731:2083650:209731020973102098035726Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeputative repressor protein of prophage2e-25115
NC_010554:2646806:265134526513452651992648Proteus mirabilis HI4320, complete genomephage repressor2e-22105
NC_014562:1844268:185137318513731852005633Pantoea vagans C9-1 chromosome, complete genomeLexA repressor6e-22104
NC_009800:289000:301440301440302090651Escherichia coli HS, complete genomeP22 repressor protein c24e-22104
NC_012947:3015985:302163430216343022284651Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeXRE family transcriptional regulator4e-22104
NC_013361:3112023:312984531298453130495651Escherichia coli O26:H11 str. 11368 chromosome, complete genomephage repressor protein CI4e-22104
NC_013941:3300000:330265133026513303301651Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeP22 repressor protein c24e-22104
NC_007946:2625461:262998526299852630635651Escherichia coli UTI89, complete genomerepressor protein2e-21102
NC_009053:553298:567934567934568200267Actinobacillus pleuropneumoniae L20, complete genomehypothetical protein5e-21100
NC_011083:374000:385883385883386533651Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,P22 repressor protein c21e-20100
NC_017047:1906000:190737719073771908024648Rahnella aquatilis HX2 chromosome, complete genomeputative repressor protein of prophage1e-2099.8
NC_015968:3301958:331235333123533313006654Enterobacter asburiae LF7a chromosome, complete genomephage repressor like XRE family transcriptional regulator5e-2097.8
NC_011415:2153243:216098621609862161642657Escherichia coli SE11 chromosome, complete genomeputative phage repressor1e-1996.7
NC_020418:2910593:291496229149622915621660Morganella morganii subsp. morganii KT, complete genomeSOS-response transcriptional repressors (RecA-mediated autopeptidases)2e-1995.9
NC_004431:3040953:305923330592333059859627Escherichia coli CFT073, complete genomePutative repressor protein of prophage1e-1789.7
NC_020181:5217000:523474952347495234973225Enterobacter aerogenes EA1509E, complete genomephage repressor2e-1582.4
NC_006138:2288261:230836023083602309070711Desulfotalea psychrophila LSv54, complete genomesimilar to repressor protein2e-1582.4
NC_012660:3116500:312771631277163128423708Pseudomonas fluorescens SBW25 chromosome, complete genomee14 prophage; putative phage repressor7e-1580.9
NC_013861:3341955:335452733545273355216690Legionella longbeachae NSW150, complete genomephage repressor1e-1480.1
NC_009708:2537557:255467625546762555386711Yersinia pseudotuberculosis IP 31758 chromosome, complete genomerepressor protein C21e-1480.1
NC_015379:4691868:469213346921334692831699Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Putative phage regulatory protein1e-1480.1
NC_007712:2028500:206857220685722069294723Sodalis glossinidius str. 'morsitans', complete genomephage repressor1e-1479.7
NC_009778:2993218:301640330164033017065663Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein6e-1477.8
NC_006905:368942:383603383603383818216Salmonella enterica subsp. enterica serovar Choleraesuis strregulatory protein cro (Antirepressor)5e-1477.8
NC_011094:593100:610406610406610621216Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein5e-1477.8
NC_012125:1330066:134546413454641345679216Salmonella enterica subsp. enterica serovar Paratyphi C strainregulatory protein cro (Antirepressor)5e-1477.8
NC_009783:1956000:195674419567441957409666Vibrio harveyi ATCC BAA-1116 chromosome I, complete sequencehypothetical protein5e-1477.8
NC_012759:4132527:414282841428284143541714Escherichia coli BW2952 chromosome, complete genomeRepressor protein CI5e-1374.3
NC_009778:1556222:156473615647361565341606Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein8e-1373.9
NC_009800:320115:326165326165326806642Escherichia coli HS, complete genomehelix-turn-helix/peptidase S24-like domain protein7e-1373.9
NC_011601:2614691:261961826196182620331714Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomerepressor protein2e-1272.4
NC_013850:1887556:189996518999651900627663Klebsiella variicola At-22 chromosome, complete genometranscriptional regulator, XRE family3e-1272
NC_002695:301939:301939301939302652714Escherichia coli O157:H7 str. Sakai, complete genomecI4e-1271.6
NC_002655:301940:301940301940302653714Escherichia coli O157:H7 EDL933, complete genomeputative cI repressor protein for prophage CP-933H4e-1271.6
NC_011353:305820:305820305820306533714Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeprophage repressor4e-1271.6
NC_016830:5031819:504224950422495042896648Pseudomonas fluorescens F113 chromosome, complete genomepeptidase s24-like domain protein8e-1270.5
NC_014306:3524980:356790335679033568601699Erwinia billingiae Eb661, complete genomeRepressor protein cI1e-1169.7
NC_021066:2226826:224391422439142244135222Raoultella ornithinolytica B6, complete genomeregulatory protein cro (Antirepressor)2e-1169.7
NC_015873:1193843:121736912173691217983615Megasphaera elsdenii DSM 20460, complete genomelexA repressor family protein3e-1168.9
NC_010002:2110953:212346721234672124114648Delftia acidovorans SPH-1, complete genomepeptidase S24 and S26 domain protein3e-1168.9
NC_008563:1175035:118767011876701188365696Escherichia coli APEC O1, complete genomeputative CI repressor of bacteriophage3e-1168.9
NC_017328:303987:317642317642318337696Shigella flexneri 2002017 chromosome, complete genomeCI protein2e-1168.9
NC_007946:1239278:125028212502821250935654Escherichia coli UTI89, complete genomeputative CI repressor of bacteriophage3e-1168.6
NC_011601:1039500:105177110517711052424654Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomerepressor protein3e-1168.6
NC_013941:975353:989229989229989882654Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeCI protein3e-1168.6
NC_011742:1177946:119125811912581191959702Escherichia coli S88 chromosome, complete genomeRepressor protein CI from phage origin3e-1168.6
NC_020418:3133831:313802131380213138731711Morganella morganii subsp. morganii KT, complete genomerepressor protein CI4e-1168.2
NC_013364:2645438:265235726523572652980624Escherichia coli O111:H- str. 11128, complete genomeputative phage repressor protein CI1e-1066.6
NC_014228:3282500:331939033193903320001612Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein1e-1066.2
NC_015663:4522109:453774545377454538440696Enterobacter aerogenes KCTC 2190 chromosome, complete genomeputative phage repressor protein CI3e-1065.5
NC_013171:896802:898431898431899051621Anaerococcus prevotii DSM 20548, complete genometranscriptional regulator, XRE family3e-1065.5
NC_007645:605500:605820605820606407588Hahella chejuensis KCTC 2396, complete genomeSOS-response transcriptional repressors (RecA-mediated autopeptidase)4e-1064.7
NC_015663:4767443:478544147854414786193753Enterobacter aerogenes KCTC 2190 chromosome, complete genomeP22 repressor protein c21e-0963.2
NC_011283:4212000:422109942210994221815717Klebsiella pneumoniae 342 chromosome, complete genomephage repressor protein2e-0963.2
NC_015389:905165:918044918044918676633Coriobacterium glomerans PW2 chromosome, complete genometranscriptional regulator, XRE family2e-0962.4
NC_002936:797110:810595810595811248654Dehalococcoides ethenogenes 195, complete genometranscriptional repressor LexA, putative4e-0961.6
NC_002936:253760:263667263667264320654Dehalococcoides ethenogenes 195, complete genometranscriptional repressor LexA, putative4e-0961.6
NC_004578:3849835:385799038579903858721732Pseudomonas syringae pv. tomato str. DC3000, complete genomerepressor protein c25e-0961.2
NC_009567:904922:904922904922905692771Haemophilus influenzae PittGG chromosome, complete genomehypothetical protein1e-0859.7
NC_009665:3869904:389559738955973896322726Shewanella baltica OS185 chromosome, complete genomeputative phage repressor2e-0859.3
NC_011748:824367:827354827354828109756Escherichia coli 55989, complete genomeRegulatory protein CI from bacteriophage origin2e-0859.3
NC_011751:643976:651596651596652351756Escherichia coli UMN026 chromosome, complete genomeregulatory protein CI from bacteriophage origin2e-0859.3
CU928145:824367:827354827354828109756Escherichia coli 55989 chromosome, complete genomeRegulatory protein CI from bacteriophage origin2e-0859.3
NC_014727:95875:103009103009103629621Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,peptidase s24-like protein2e-0859.3
NC_014922:825396:848309848309849277969Haemophilus influenzae F3047 chromosome, complete genomehypothetical protein2e-0858.9
NC_012779:2184927:220196422019642202635672Edwardsiella ictaluri 93-146, complete genomerepressor protein CI3e-0858.5
NC_004431:1401681:141242714124271412849423Escherichia coli CFT073, complete genomeRepressor protein4e-0858.5
NC_007146:1405459:142911714291171430085969Haemophilus influenzae 86-028NP, complete genomehypothetical protein4e-0858.5
NC_014837:2354241:235780423578042358529726Pantoea sp. At-9b chromosome, complete genomeXRE family transcriptional regulator1e-0756.6
NC_007622:1842000:188430918843091884977669Staphylococcus aureus RF122, complete genomeprobable transcriptional repressor5e-0754.7
NC_009778:959982:977343977343978032690Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein5e-0754.7
NC_011750:5045927:505908250590825059756675Escherichia coli IAI39 chromosome, complete genomerepressor protein phage e14; e14 prophage6e-0754.3
NC_007954:3887488:389894838989483899637690Shewanella denitrificans OS217, complete genometransciptional regulator6e-0754.3
AC_000091:1191353:120383612038361204510675Escherichia coli W3110 DNA, complete genomerepressor protein phage e149e-0753.9
NC_007946:2931364:293500329350032935677675Escherichia coli UTI89, complete genomeputative phage repressor9e-0753.9
NC_008563:2946391:295003029500302950704675Escherichia coli APEC O1, complete genomeputative phage repressor9e-0753.9
NC_000913:1188999:120148212014821202156675Escherichia coli K12, complete genomee14 prophage; repressor protein phage e149e-0753.9
NC_011742:2863316:286734128673412868015675Escherichia coli S88 chromosome, complete genomerepressor protein phage e14; e14 prophage9e-0753.9
NC_009455:53000:939229392294554633Dehalococcoides sp. BAV1 chromosome, complete genomeXRE family transcriptional regulator1e-0653.5
NC_014910:1708045:172518017251801725950771Alicycliphilus denitrificans BC chromosome, complete genomepeptidase s24/s26a/s26b, conserved region protein1e-0653.1
NC_020260:1615135:162344316234431623850408Cronobacter sakazakii Sp291, complete genometranscriptional repressor DicA1e-0653.1
NC_009801:2193000:221593622159362216331396Escherichia coli E24377A, complete genomeputative transcriptional regulator DicA2e-0653.1
NC_013361:3287671:329508932950893295796708Escherichia coli O26:H11 str. 11368 chromosome, complete genomephage repressor protein CI2e-0652.4
NC_009455:53000:812988129881921624Dehalococcoides sp. BAV1 chromosome, complete genomephage repressor like transcriptional regulator2e-0652.4
NC_011601:1269500:127378112737811274188408Escherichia coli O127:H6 str. E2348/69 chromosome, complete genometranscriptional repressor DicA7e-0650.8