Pre_GI: BLASTP Hits

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Query: NC_012917:833721:837635 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 837635, End: 838179, Length: 545

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012917:3684840:368921536892153689756542Pectobacterium carotovorum subsp. carotovorum PC1, complete genome5e-68256
NC_014500:2019113:204330220433022044042741Dickeya dadantii 3937 chromosome, complete genomeputative prophage protein7e-24110
NC_014306:4901390:493954549395454940084540Erwinia billingiae Eb661, complete genomePutative prophage CI repressor1e-1789.4
NC_013008:306953:323638323638324195558Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeregulator encoded in prophage CP-933I8e-1786.7
NC_002695:301939:318446318446319003558Escherichia coli O157:H7 str. Sakai, complete genomeputative CI repressor8e-1786.7
NC_002655:301940:318447318447319004558Escherichia coli O157:H7 EDL933, complete genomeputative regulator encoded in prophage CP-933I8e-1786.7
NC_013941:338121:359420359420359977558Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeCI repressor9e-1786.3
NC_013592:2703327:270576327057632706277515Dickeya dadantii Ech586, complete genomehypothetical protein5e-1684
NC_004088:3382148:339650633965063397048543Yersinia pestis KIM, complete genomehypothetical protein5e-1580.9
NC_008150:650899:654513654513655055543Yersinia pestis Antiqua, complete genomeputative prophage protein5e-1580.9
NC_003143:1233128:123777712377771238319543Yersinia pestis CO92, complete genomeputative prophage protein5e-1580.9
NC_008149:3251196:326555532655553266097543Yersinia pestis Nepal516, complete genomeprophage protein5e-1580.9
NC_005810:1130251:114461011446101145152543Yersinia pestis biovar Microtus str. 91001, complete genomeputative prophage protein5e-1580.9
NC_009381:2939782:295414029541402954682543Yersinia pestis Pestoides F chromosome, complete genomeprophage protein5e-1580.9
NC_017168:4155143:415979341597934160335543Yersinia pestis A1122 chromosome, complete genomeputative prophage protein5e-1580.9
NC_017265:1136000:113910711391071139649543Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,putative prophage protein5e-1580.9
NC_014500:443874:459613459613460152540Dickeya dadantii 3937 chromosome, complete genomeputative prophage protein5e-1580.5
NC_016810:2871689:289680228968022897353552Salmonella enterica subsp. enterica serovar Typhimurium strbacteriophage protein1e-1479.3
NC_014306:4376012:441031944103194410858540Erwinia billingiae Eb661, complete genomePhage CI repressor3e-1477.8
NC_012912:4194821:419766041976604198199540Dickeya zeae Ech1591, complete genomeprophage protein1e-1375.9
NC_012880:4117376:411990341199034120442540Dickeya dadantii Ech703, complete genomeprophage protein1e-1375.9
NC_013592:4295449:430045943004594300995537Dickeya dadantii Ech586, complete genomePhage P4, Ash protein-like protein2e-1375.1
NC_011147:4460726:446244444624444462815372Salmonella enterica subsp. enterica serovar Paratyphi A strphage immunity repressor protein5e-1063.9
NC_006511:4465495:446721444672144467585372Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCphage immunity repressor protein5e-1063.9
NC_009436:3367194:338105733810573381608552Enterobacter sp. 638, complete genomeCI repressor4e-0960.8
NC_011750:5045927:506195250619525062788837Escherichia coli IAI39 chromosome, complete genomeImmunity region from phage5e-0960.8
NC_011353:305820:322551322551322883333Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeprotein ash2e-0858.9
NC_007712:2897000:290163729016372902236600Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein3e-0858.2
NC_014121:677799:691835691835692167333Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeprotein ash (Protein cI)4e-0857.8
NC_016857:2871689:289697028969702897353384Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74phage immunity repressor protein2e-0755.5
NC_003198:4676536:469127346912734691656384Salmonella enterica subsp. enterica serovar Typhi str. CT18,phage immunity repressor protein2e-0755.5
NC_004631:4661000:467416246741624674545384Salmonella enterica subsp. enterica serovar Typhi Ty2, completephage immunity repressor protein2e-0755.5
NC_014121:1101093:111258111125811112976396Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completephage immunity repressor protein2e-0755.1
CP002797:2472908:247622824762282476623396Escherichia coli NA114, complete genomeputative phage protein5e-0753.9
NC_011083:2542876:255977325597732560168396Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,phage immunity repressor protein8e-0753.1