Pre_GI: BLASTP Hits

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Query: NC_012917:3198000:3202948 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 3202948, End: 3203868, Length: 921

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015968:3277217:328402732840273284956930Enterobacter asburiae LF7a chromosome, complete genomeformate/nitrite transporter3e-118424
NC_016831:531404:544195544195545136942Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein5e-117421
NC_011294:2492168:249887024988702499811942Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein5e-117421
NC_011205:2621415:262597226259722626913942Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein5e-117421
NC_011083:2542876:254957725495772550518942Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,inner membrane protein YfdC1e-116419
NC_011274:2483038:248974124897412490682942Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein3e-116418
NC_012125:1360593:137446613744661375407942Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein3e-116418
NC_006511:529424:542166542166543107942Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein5e-116417
NC_011147:529458:542200542200543141942Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein5e-116417
NC_004631:531254:543995543995544936942Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein4e-116417
NC_003198:2453074:245977624597762460717942Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein4e-116417
NC_016832:531208:543949543949544890942Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Inner membrane protein yfdC4e-116417
NC_013716:2898434:2902857290285729039991143Citrobacter rodentium ICC168, complete genomehypothetical protein1e-114412
NC_009436:3117661:312438731243873125328942Enterobacter sp. 638, complete genometransport3e-111401
NC_002655:3260500:326185632618563262788933Escherichia coli O157:H7 EDL933, complete genomeputative transport1e-110399
CP002185:2608000:261704826170482617980933Escherichia coli W, complete genomepredicted inner membrane protein1e-110399
CU928145:2655989:266427426642742665206933Escherichia coli 55989 chromosome, complete genomeconserved hypothetical protein; putative inner membrane protein1e-110399
NC_011742:2489000:249211124921112493043933Escherichia coli S88 chromosome, complete genomehypothetical protein2e-110399
NC_007946:2593500:259628925962892597221933Escherichia coli UTI89, complete genomeputative transport2e-110399
NC_008563:2565876:256897925689792569911933Escherichia coli APEC O1, complete genomeputative transport protein2e-110399
NC_002695:3189425:319190031919003192832933Escherichia coli O157:H7 str. Sakai, complete genomeputative transport1e-110399
NC_011750:2585015:258749025874902588422933Escherichia coli IAI39 chromosome, complete genomehypothetical protein1e-110399
CP002516:1475521:148787714878771488809933Escherichia coli KO11, complete genomeformate/nitrite transporter1e-110399
NC_011748:2655989:266427426642742665206933Escherichia coli 55989, complete genomeconserved hypothetical protein; putative inner membrane protein1e-110399
NC_011415:2732000:274042327404232741355933Escherichia coli SE11 chromosome, complete genomeputative transport protein1e-110399
NC_013361:3254000:326312132631213264053933Escherichia coli O26:H11 str. 11368 chromosome, complete genomehypothetical protein1e-110399
NC_013941:2928000:293296629329662933898933Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein1e-110399
NC_016902:1475521:148787714878771488809933Escherichia coli KO11FL chromosome, complete genomeformate/nitrite transporter1e-110399
NC_015663:5253242:525990952599095260820912Enterobacter aerogenes KCTC 2190 chromosome, complete genomeformate/nitrite transporter1e-110399
NC_009800:2505872:250692125069212507853933Escherichia coli HS, complete genomehypothetical protein2e-110398
NC_012967:2409500:240974324097432410675933Escherichia coli B str. REL606 chromosome, complete genomeputative inner membrane protein2e-110398
NC_007613:2376974:237918723791872380119933Shigella boydii Sb227, complete genomeputative transport7e-110397
NC_012759:2342986:234912823491282350060933Escherichia coli BW2952 chromosome, complete genomeputative inner membrane protein2e-109395
AC_000091:2462461:247074724707472471679933Escherichia coli W3110 DNA, complete genomepredicted inner membrane protein2e-109395
NC_010473:2548946:255508825550882556020933Escherichia coli str. K-12 substr. DH10B, complete genomepredicted inner membrane protein2e-109395
NC_000913:2455037:246332324633232464255933Escherichia coli K12, complete genomepredicted inner membrane protein2e-109395
NC_010658:2529033:253125525312552532187933Shigella boydii CDC 3083-94, complete genomehypothetical protein2e-109395
NC_014839:253961:295463295463296368906Pantoea sp. At-9b plasmid pPAT9B02, complete sequenceformate/nitrite transporter2e-107389
NC_014306:3524980:352996835299683530885918Erwinia billingiae Eb661, complete genomePutative transport protein5e-105380
NC_016818:1291665:130562513056251306542918Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeformate/nitrite transporter family protein5e-104377
NC_015224:3291736:330078233007823301693912Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,putative inner membrane protein7e-103373
NC_015061:1251905:127252312725231273440918Rahnella sp. Y9602 chromosome, complete genomeformate/nitrite transporter2e-101368
NC_020209:4312892:434655043465504347440891Pseudomonas poae RE*1-1-14, complete genomehypothetical protein9e-75280
NC_010501:1286971:129339112933911294287897Pseudomonas putida W619, complete genometransporter, formate/nitrite family6e-71267
NC_015873:2197412:221363522136352214492858Megasphaera elsdenii DSM 20460, complete genomeformate/nitrate transporter1e-41170
NC_014299:82584:132177132177133133957Halalkalicoccus jeotgali B3 plasmid 2, complete sequenceformate/nitrite transporter6e-22105
NC_011773:3547507:356876635687663569581816Bacillus cereus AH820 chromosome, complete genomeputative formate transporter2e-0859.7
NC_003909:3483244:350449935044993505314816Bacillus cereus ATCC 10987, complete genomeformate transporter, putative3e-0859.7
NC_005773:5310339:532528553252855326100816Pseudomonas syringae pv. phaseolicola 1448A, complete genomeFormate transporter1e-0757.8
NC_007005:5500196:552150555215055522320816Pseudomonas syringae pv. syringae B728a, complete genomeFormate/nitrite transporter1e-0757.8
NC_013169:612456:616884616884617681798Kytococcus sedentarius DSM 20547, complete genomeformate/nitrite transporter family protein2e-0756.6
NC_014376:1217000:123655712365571237465909Clostridium saccharolyticum WM1 chromosome, complete genomeformate/nitrite transporter6e-0755.1
NC_014976:759129:787843787843788643801Bacillus subtilis BSn5 chromosome, complete genomeputative formate/nitrite transporter3e-0652.8