Pre_GI: BLASTP Hits

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Query: NC_012848:320883:330895 Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132501,

Start: 330895, End: 331581, Length: 687

Host Lineage: Rhizobium leguminosarum; Rhizobium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host, Root nodule. This biovar is a symbiont of clover plants and is important commercially as it is used in the agricultural industry. Strain WSM1325 is compatible with many perennial clovers of Mediterranean origin used in farming, such as T. pratense, and is therefore one of the most important clover inoculants but is incompatible with American and African perennial clovers, such as those nodulated by the dissimilar strain WSM2304. This organism, like other Rhizobia, establishes a symbiotic relationship with a legume plant, providing nitrogen in exchange for a protected environment. The legume roots secrete flavonoids and isoflavonoids which the bacteria recognize and use to turn on genes involved in root nodulation. Many of the root nodulation genes are involved in synthesis and secretion of a nodule inducing signal, a lipochito-oligosaccharide molecule, which the plant recognizes, triggering nodule formation. The bacterium is endocytosed and exists inside a membrane bound organelle, the symbiosome, and fixes nitrogen for the plant cell while the host cell provides carbon compounds for the bacterium to grow on. The nitrogen fixation is important as it obviates the need for expensive and environmentally damaging fertilizer use.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017265:2213500:223523622352362236066831Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,glycerophosphoryl diester phosphodiesterase5e-1064.7
NC_017168:3433804:345586534558653456695831Yersinia pestis A1122 chromosome, complete genomeglycerophosphoryl diester phosphodiesterase5e-1064.7
NC_014029:2285323:230755723075572308387831Yersinia pestis Z176003 chromosome, complete genomehypothetical protein5e-1064.7
NC_009381:1205900:122808212280821228912831Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein5e-1064.7
NC_004088:2491303:251356925135692514399831Yersinia pestis KIM, complete genomephosphodiesterase5e-1064.7
NC_003454:370418:373599373599374384786Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completeGlycerophosphoryl diester phosphodiesterase7e-0960.8
NC_014655:379937:391937391937392800864Leadbetterella byssophila DSM 17132 chromosome, complete genomeglycerophosphoryl diester phosphodiesterase9e-0960.5
NC_002976:707827:707827707827708753927Staphylococcus epidermidis RP62A, complete genomeglycerophosphoryl diester phosphodiesterase, putative1e-0860.1
NC_004461:813748:813748813748814674927Staphylococcus epidermidis ATCC 12228, complete genomeglycerophosphoryl diester phosphodiesterase1e-0860.1
NC_015634:2991669:299612529961252996922798Bacillus coagulans 2-6 chromosome, complete genomeglycerophosphoryl diester phosphodiesterase1e-0860.1
NC_014100:533322:534683534683535609927Caulobacter segnis ATCC 21756 chromosome, complete genomeglycerophosphoryl diester phosphodiesterase6e-0857.8
NC_013410:1203937:121014812101481211041894Fibrobacter succinogenes subsp. succinogenes S85 chromosome,glycerophosphoryl diester phosphodiesterase1e-0757
NC_014171:4039120:405321840532184053946729Bacillus thuringiensis BMB171 chromosome, complete genomeglycerophosphoryl diester phosphodiesterase2e-0756.2
NC_010184:4021688:403806740380674038795729Bacillus weihenstephanensis KBAB4, complete genomeGlycerophosphodiester phosphodiesterase2e-0756.2
NC_016593:2447938:245263324526332453361729Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completeglycerophosphoryl diester phosphodiesterase2e-0756.2
NC_011725:4159000:417265041726504173378729Bacillus cereus B4264 chromosome, complete genomeglycerophosphoryl diester phosphodiesterase2e-0756.2
NC_011772:4125996:414089141408914141619729Bacillus cereus G9842, complete genomeglycerophosphoryl diester phosphodiesterase family protein2e-0756.2
NC_004722:4117459:413049341304934131221729Bacillus cereus ATCC 14579, complete genomeGlycerophosphoryl diester phosphodiesterase2e-0756.2
NC_017208:4166008:417904341790434179771729Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeglycerophosphoryl diester phosphodiesterase2e-0756.2
NC_009698:3275839:329208132920813292836756Clostridium botulinum A str. Hall chromosome, complete genomeglycerophosphoryl diester phosphodiesterase2e-0755.8
NC_009380:2310000:2322850232285023243251476Salinispora tropica CNB-440 chromosome, complete genomeglycerophosphoryl diester phosphodiesterase2e-0755.8
NC_003909:3941282:395484839548483955576729Bacillus cereus ATCC 10987, complete genomeglycerophosphoryl diester phosphodiesterase family protein2e-0755.8
NC_010516:3466000:348730034873003488049750Clostridium botulinum B1 str. Okra, complete genomeglycerophosphoryl diester phosphodiesterase3e-0755.5
NC_006274:4031246:404427740442774045005729Bacillus cereus E33L, complete genomeglycerophosphoryl diester phosphodiesterase, glycerophosphodiester phosphodiesterase4e-0755.1
NC_005945:3992600:400653340065334007261729Bacillus anthracis str. Sterne, complete genomeglycerophosphoryl diester phosphodiesterase family protein7e-0754.3
NC_003997:3993223:400603440060344006762729Bacillus anthracis str. Ames, complete genomeglycerophosphoryl diester phosphodiesterase family protein7e-0754.3
NC_007530:3992228:400616140061614006889729Bacillus anthracis str. 'Ames Ancestor', complete genomeglycerophosphoryl diester phosphodiesterase family protein7e-0754.3
NC_012659:3992684:400606140060614006789729Bacillus anthracis str. A0248, complete genomeglycerophosphoryl diester phosphodiesterase family protein7e-0754.3
NC_014335:3902155:391555639155563916284729Bacillus cereus biovar anthracis str. CI chromosome, completeglycerophosphoryl diester phosphodiesterase7e-0754.3
NC_011773:3982008:399838439983843999112729Bacillus cereus AH820 chromosome, complete genomeglycerophosphoryl diester phosphodiesterase7e-0754.3
NC_016779:3913627:392756439275643928292729Bacillus cereus F837/76 chromosome, complete genomeglycerophosphoryl diester phosphodiesterase7e-0754.3
NC_008600:3976045:399243339924333993167735Bacillus thuringiensis str. Al Hakam, complete genomeglycerophosphoryl diester phosphodiesterase7e-0754.3
NC_011969:3879412:389600938960093896737729Bacillus cereus Q1 chromosome, complete genomeglycerophosphoryl diester phosphodiesterase family protein7e-0754.3
NC_005957:3975192:399263939926393993367729Bacillus thuringiensis serovar konkukian str. 97-27, completeglycerophosphoryl diester phosphodiesterase, glycerophosphodiester phosphodiesterase6e-0754.3
UCMB5137:140766:152503152503152841339Bacillus atrophaeus UCMB-5137glycerophosphoryl diester phosphodiesterase1e-0653.5
NC_014014:117925:121968121968122702735Mycoplasma crocodyli MP145 chromosome, complete genomeglycerophosphodiester phosphodiesterase2e-0652.8
NC_006624:1208464:122067912206791221425747Thermococcus kodakarensis KOD1, complete genomeglycerophosphoryl diester phosphodiesterase3e-0652.4
NC_003413:1847935:185211118521111852872762Pyrococcus furiosus DSM 3638, complete genomeglycerophosphodiester phosphodiesterase2e-0652.4
NC_003888:4377000:437827143782714379098828Streptomyces coelicolor A3(2), complete genomephosphodiesterase3e-0652
NC_014829:722000:733738733738734487750Bacillus cellulosilyticus DSM 2522 chromosome, complete genomeglycerophosphoryl diester phosphodiesterase5e-0651.2
NC_014639:3850000:385186938518693852756888Bacillus atrophaeus 1942 chromosome, complete genomeglycerophosphoryl diester phosphodiesterase8e-0650.8
CP002207:3850000:385186938518693852756888Bacillus atrophaeus 1942, complete genomeglycerophosphoryl diester phosphodiesterase8e-0650.8
NC_014334:2696000:271265227126522713350699Lactobacillus casei str. Zhang chromosome, complete genomeglycerophosphoryl diester phosphodiesterase8e-0650.8