Pre_GI: BLASTP Hits

Some Help

Query: NC_012660:3689223:3703019 Pseudomonas fluorescens SBW25 chromosome, complete genome

Start: 3703019, End: 3703990, Length: 972

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Isolated in 1989 from the leaf surface of a sugar beet plant grown at the University Farm, Wytham, Oxford, UK. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017986:4885979:4888798488879848898621065Pseudomonas putida ND6 chromosome, complete genomeintegrase8e-119426
NC_011770:2690501:2690501269050126915261026Pseudomonas aeruginosa LESB58, complete genomesite-specific recombinase, phage integrase family6e-104377
NC_002947:4484824:449569044956904496649960Pseudomonas putida KT2440, complete genomesite-specific recombinase, phage integrase family2e-101369
NC_017986:4931104:4946514494651449475211008Pseudomonas putida ND6 chromosome, complete genomephage integrase2e-100365
NC_008027:2331617:2337757233775723388061050Pseudomonas entomophila L48, complete genomesite-specific recombinase, integrase family6e-99360
NC_011770:860944:8639658639658650141050Pseudomonas aeruginosa LESB58, complete genomeIntegrase5e-92337
NC_017033:1052000:1053148105314810541671020Frateuria aurantia DSM 6220 chromosome, complete genomesite-specific recombinase XerC2e-54213
NC_007005:3414579:3419554341955434205881035Pseudomonas syringae pv. syringae B728a, complete genomePhage integrase:Phage integrase, N-terminal SAM-like3e-53209
NC_012724:359444:3687393687393697581020Burkholderia glumae BGR1 chromosome 1, complete genomePhage-related integrase2e-48192
NC_015942:403296:4159944159944170011008Acidithiobacillus ferrivorans SS3 chromosome, complete genomeintegrase family protein4e-36152
NC_010645:369408:4026334026334036671035Bordetella avium 197N, complete genomeintegrase1e-32140
NC_013446:4045000:4052312405231240533461035Comamonas testosteroni CNB-2, complete genomehypothetical protein1e-30133
NC_009053:553298:5572235572235582631041Actinobacillus pleuropneumoniae L20, complete genomepredicted phage integrase family protein2e-30132
NC_012724:359444:3783543783543793821029Burkholderia glumae BGR1 chromosome 1, complete genomePhage integrase:Phage integrase, N-terminal SAM-like protein2e-29129
NC_010508:451184:461527461527462063537Burkholderia cenocepacia MC0-3 chromosome 1, complete sequence1e-25117
NC_007005:1738500:174509817450981745496399Pseudomonas syringae pv. syringae B728a, complete genome2e-25116
NC_009656:2663387:266807926680792668627549Pseudomonas aeruginosa PA7 chromosome, complete genomephage integrase family protein4e-25115
NC_013446:2761000:277649127764912777219729Comamonas testosteroni CNB-2, complete genomehypothetical protein2e-21103
NC_016816:2953530:2977372297737229783941023Pantoea ananatis LMG 5342, complete genomesite-specific recombinase, phage integrase family2e-20100
NC_007712:1954808:1974024197402419750401017Sodalis glossinidius str. 'morsitans', complete genomephage integrase3e-2099.4
NC_009708:2537557:2555953255595325569691017Yersinia pseudotuberculosis IP 31758 chromosome, complete genomephage integrase family site specific recombinase2e-1996.7
NC_020181:2097066:2117522211752221185741053Enterobacter aerogenes EA1509E, complete genomePutative integrase5e-1788.6
NC_012721:1052883:105740610574061057858453Burkholderia glumae BGR1 chromosome 2, complete genomePhage integrase family protein4e-1685.5
NC_006155:2116834:2128303212830321293251023Yersinia pseudotuberculosis IP 32953, complete genomeputative integrase1e-1584.3
NC_012779:2127542:2148941214894121499511011Edwardsiella ictaluri 93-146, complete genomesite-specific recombinase, phage integrase family4e-1582.4
NC_007712:2028500:2057823205782320588451023Sodalis glossinidius str. 'morsitans', complete genomeputative phage integrase3e-1479.3
NC_009656:2663387:266862426686242669106483Pseudomonas aeruginosa PA7 chromosome, complete genomephage integrase family protein5e-1479
NC_011294:2053991:205795920579592058948990Salmonella enterica subsp. enterica serovar Enteritidis strphage integrase4e-1479
NC_011205:2180598:218594621859462186935990Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853integrase protein4e-1479
CP002797:4812799:4826760482676048278061047Escherichia coli NA114, complete genomePutative integrase9e-1477.8
NC_013132:7954000:7968218796821879694891272Chitinophaga pinensis DSM 2588, complete genomeintegrase family protein2e-1377
NC_007712:1926500:193080019308001931645846Sodalis glossinidius str. 'morsitans', complete genomeputative phage integrase2e-1377
NC_005810:1663672:167309716730971673675579Yersinia pestis biovar Microtus str. 91001, complete genomeintegrase3e-1376.3
NC_008149:2517538:253577225357722536329558Yersinia pestis Nepal516, complete genomehypothetical protein4e-1375.9
NC_007712:1712667:171266717126671713602936Sodalis glossinidius str. 'morsitans', complete genomeputative phage integrase9e-1374.7
NC_009381:1414985:142000214200021420559558Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein1e-1274.3
NC_008150:1384102:139870513987051399262558Yersinia pestis Antiqua, complete genomehypothetical protein1e-1273.9
NC_013364:2898964:2916736291673629178061071Escherichia coli O111:H- str. 11128, complete genomeputative integrase2e-1273.6
NC_017265:2306500:232086923208692321384516Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,Integrase3e-1272.8
NC_017168:3535786:354487235448723545387516Yersinia pestis A1122 chromosome, complete genomehypothetical protein3e-1272.8
NC_003143:2101902:211562621156262116141516Yersinia pestis CO92, complete genomehypothetical protein3e-1272.8
NC_011770:1431740:1433854143385414349571104Pseudomonas aeruginosa LESB58, complete genomephage integrase, putative1e-1170.5
NC_016609:4233701:4271948427194842730391092Niastella koreensis GR20-10 chromosome, complete genomeintegrase family protein3e-1169.7
NC_011770:2499432:2540392254039225415041113Pseudomonas aeruginosa LESB58, complete genomephage integrase, putative7e-1168.6
NC_011601:1039500:1043517104351710445901074Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeintegrase1e-0964.3
NC_011353:1716037:172511817251181725858741Escherichia coli O157:H7 str. EC4115 chromosome, complete genome1e-0964.3
NC_013941:1613595:162264716226471623387741Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeintegrase1e-0964.3
NC_011601:1466496:147555814755581476250693Escherichia coli O127:H6 str. E2348/69 chromosome, complete genome1e-0963.9
NC_002655:2264773:228294922829492283650702Escherichia coli O157:H7 EDL933, complete genomeputative integrase fragment2e-0963.9
NC_013361:1754346:176509417650941765786693Escherichia coli O26:H11 str. 11368 chromosome, complete genome2e-0963.9
NC_013008:1715831:172409317240931724785693Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeintegrase2e-0963.9
NC_002695:1794635:180352718035271804219693Escherichia coli O157:H7 str. Sakai, complete genomeintegrase2e-0963.9
NC_014355:288000:2962442962442972841041Candidatus Nitrospira defluvii, complete genomeputative phage integrase6e-0962
NC_012967:786534:7879527879527890221071Escherichia coli B str. REL606 chromosome, complete genomeintegrase1e-0861.2
NC_013941:975353:9807899807899818591071Escherichia coli O55:H7 str. CB9615 chromosome, complete genomephage integrase family1e-0861.2
NC_011601:717072:7208917208917219611071Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeintegrase9e-0961.2
NC_014722:846084:8501788501788513681191Burkholderia rhizoxinica HKI 454, complete genomehypothetical protein1e-0757.4
NC_008687:302450:3053223053223065031182Paracoccus denitrificans PD1222 chromosome 2, complete sequencephage integrase family protein1e-0757.4
NC_015580:141379:1621711621711633671197Novosphingobium sp. PP1Y, complete genomephage integrase3e-0756.2
NC_008702:2039462:2046178204617820472541077Azoarcus sp. BH72, complete genomesite-specific recombinase, phage integrase family4e-0755.8
NC_014355:1223243:1233478123347812345481071Candidatus Nitrospira defluvii, complete genomeputative integrase4e-0755.8
NC_012988:4633930:4641261464126146422741014Methylobacterium extorquens DM4, complete genomeintegrase8e-0754.7
NC_015458:2338437:2340983234098323420711089Pusillimonas sp. T7-7 chromosome, complete genomesite-specific recombinase, phage integrase family1e-0654.3
NC_011757:5693584:5696052569605256971161065Methylobacterium chloromethanicum CM4, complete genomeintegrase family protein2e-0653.5
NC_010172:4185904:4194558419455841955621005Methylobacterium extorquens PA1, complete genomeintegrase family protein2e-0653.5
NC_015379:6226661:6232535623253562336681134Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative phage integrase2e-0653.5
NC_015381:429940:4389684389684400111044Burkholderia gladioli BSR3 chromosome 1, complete sequencephage integrase2e-0653.1
NC_014355:243543:2579012579012590221122Candidatus Nitrospira defluvii, complete genomephage integrase4e-0652.8
NC_010682:3313944:3349996334999633510511056Ralstonia pickettii 12J chromosome 1, complete sequenceintegrase family protein5e-0652
NC_012947:3015985:302838230283823029305924Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completelambda integrase7e-0651.6