Pre_GI: BLASTP Hits

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Query: NC_011959:815601:831268 Thermomicrobium roseum DSM 5159, complete genome

Start: 831268, End: 832887, Length: 1620

Host Lineage: Thermomicrobium roseum; Thermomicrobium; Thermomicrobiaceae; Thermomicrobiales; Chloroflexi; Bacteria

General Information: Thermomicrobium roseum DSM 5159 was isolated from Yellowstone National Park, USA. Obligate thermophile with unusual cell wall structure. Thermomicrobium roseum is a red-pigmented, rod-shaped, Gram-negative extreme thermophile that possesses both an atypical cell wall composition and an unusual cell membrane that is composed entirely of long-chain 1,2-diols. Analyses of environmental sequences from hot spring environments show that T.roseum displays a low quantity but ubiquitous presence in top layers of microbial mats. Few standard housekeeping genes are found on the megaplasmid, however, it does encode a complete system for chemotaxis including both chemosensory components and an entire flagellar apparatus. T. roseum oxidizes CO aerobically, making it the first thermophile known to do so. In addition, is is propose that glycosylation of its carotenoids plays a crucial role in the adaptation of the cell membrane to this bacterium's thermophilic lifestyle. Because T. roseum is a deep-branching member of this phylum, eventhough this species is not photosynthetic, analysis of the genome provides some insight into the origins of photosynthesis in the Chloroflexi.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013525:766848:7668487668487683921545Thermobaculum terrenum ATCC BAA-798 chromosome 1, complete genomeintegral membrane protein MviN5e-39162
NC_014532:349384:3661023661023677271626Halomonas elongata DSM 2581, complete genomeK03980 virulence factor8e-32138
NC_015573:2063925:2064976206497620665651590Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeintegral membrane protein MviN7e-30132
NC_010718:2492895:2506780250678025083241545Natranaerobius thermophilus JW/NM-WN-LF, complete genomeintegral membrane protein MviN2e-29130
NC_007645:6049340:6071246607124660728141569Hahella chejuensis KCTC 2396, complete genomeintegral membrane protein MviN3e-29130
NC_008702:2378890:2396768239676823983061539Azoarcus sp. BH72, complete genomeprobable virulence factor2e-26120
NC_009708:2347350:2358289235828923598241536Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeintegral membrane protein MviN2e-26120
NC_010465:2383219:2395386239538623970141629Yersinia pseudotuberculosis YPIII, complete genomeintegral membrane protein MviN2e-26120
NC_008800:2592500:2602499260249926040341536Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,hypothetical protein2e-26120
NC_008149:1718000:1723042172304217245771536Yersinia pestis Nepal516, complete genomemembrane protein1e-25118
NC_010159:2546590:2558924255892425604591536Yersinia pestis Angola, complete genomeintegral membrane protein MviN1e-25118
NC_005810:2091930:2096856209685620983911536Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein1e-25118
NC_003143:2309500:2314426231442623159611536Yersinia pestis CO92, complete genomehypothetical protein1e-25118
NC_004088:2491303:2503559250355925050941536Yersinia pestis KIM, complete genomevirulence factor1e-25118
NC_008150:1593500:1598714159871416002491536Yersinia pestis Antiqua, complete genomehypothetical protein1e-25118
NC_009381:1205900:1218072121807212196071536Yersinia pestis Pestoides F chromosome, complete genomemembrane protein1e-25118
NC_017265:2213500:2225222222522222267571536Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,putative inner membrane protein1e-25118
NC_017168:3433804:3446012344601234475471536Yersinia pestis A1122 chromosome, complete genomevirulence factor MviN1e-25118
NC_017160:2212806:2225046222504622265811536Yersinia pestis D182038 chromosome, complete genomehypothetical protein1e-25118
NC_017154:2306421:2311347231134723128821536Yersinia pestis D106004 chromosome, complete genomehypothetical protein1e-25118
NC_014029:2285323:2297547229754722990821536Yersinia pestis Z176003 chromosome, complete genomehypothetical protein1e-25118
NC_010634:2297000:2301404230140423029391536Yersinia pseudotuberculosis PB1/+, complete genomeintegral membrane protein MviN2e-25117
NC_006155:2378526:2383495238349523850301536Yersinia pseudotuberculosis IP 32953, complete genomevirulence factor mviN, possible MOP Superfamliy efflux pump2e-25117
NC_007484:3429140:3433639343363934351771539Nitrosococcus oceani ATCC 19707, complete genomeVirulence factor MVIN-like1e-24115
NC_014410:2511753:2519518251951825210741557Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,integral membrane protein MviN8e-25115
NC_006677:2042387:2057316205731620588721557Gluconobacter oxydans 621H, complete genomeVirulence factor MviN8e-25115
NC_014315:3278386:3279917327991732814551539Nitrosococcus watsoni C-113 chromosome, complete genomeintegral membrane protein MviN7e-25115
NC_009659:2849000:2851336285133628528861551Janthinobacterium sp. Marseille chromosome, complete genomevirulence factor MviN6e-25115
NC_005955:1259393:1272665127266512742361572Bartonella quintana str. Toulouse, complete genomeVirulence factor mviN homolog3e-23110
NC_010161:1811000:1826661182666118282321572Bartonella tribocorum CIP 105476, complete genomeMviN protein9e-23108
NC_016148:1877711:1903176190317619046991524Thermovirga lienii DSM 17291 chromosome, complete genomeintegral membrane protein MviN2e-22107
NC_012846:1679184:1696368169636816979391572Bartonella grahamii as4aup, complete genomevirulence factor MviN5e-22106
NC_010995:3821327:3844192384419238457961605Cellvibrio japonicus Ueda107, complete genomeintegral membrane protein MviN7e-22105
NC_008593:980731:9972499972499987961548Clostridium novyi NT, complete genomeintegral membrane protein MviN1e-21105
NC_015577:862659:8798868798868814781593Treponema azotonutricium ZAS-9 chromosome, complete genomeintegral membrane protein MviN1e-21105
NC_010943:1332243:1368167136816713697861620Stenotrophomonas maltophilia K279a, complete genomeputative transmembrane virulence factor MmviN2e-21104
NC_008463:5364428:5383305538330553848431539Pseudomonas aeruginosa UCBPP-PA14, complete genomeputative virulence factor, membrane protein3e-21103
NC_018080:5192264:5212249521224952137871539Pseudomonas aeruginosa DK2 chromosome, complete genomevirulence factor, membrane protein3e-21103
NC_015714:542679:5538705538705554501581Treponema paraluiscuniculi Cuniculi A chromosome, complete genomeintegral membrane protein MviN7e-21102
NC_000919:545141:5563275563275579071581Treponema pallidum subsp. pallidum str. Nichols, complete genomevirulence factor (mviN)1e-20101
NC_010741:546573:5577595577595593391581Treponema pallidum subsp. pallidum SS14, complete genomevirulence factor1e-20101
NC_016842:546661:5578475578475594271581Treponema pallidum subsp. pertenue str. SamoaD chromosome, completeintegral membrane protein MviN1e-20101
NC_016843:547149:5583355583355599151581Treponema pallidum subsp. pertenue str. Gauthier chromosome,integral membrane protein MviN1e-20101
NC_016844:547069:5582555582555598351581Treponema pallidum subsp. pallidum DAL-1 chromosome, completeintegral membrane protein MviN1e-20101
NC_016848:547115:5583015583015598811581Treponema pallidum subsp. pertenue str. CDC2 chromosome, completeintegral membrane protein MviN1e-20101
NC_017268:546376:5575625575625591421581Treponema pallidum subsp. pallidum str. Chicago chromosome,integral membrane protein MviN1e-20101
NC_021508:546592:5577785577785593581581Treponema pallidum subsp. pallidum SS14, complete genomeintegral membrane protein MviN1e-20101
NC_020301:1449616:1467232146723214688031572Bartonella vinsonii subsp. berkhoffii str. Winnie, complete genomevirulence factor3e-20100
NC_015677:2939301:2964735296473529663001566Ramlibacter tataouinensis TTB310 chromosome, complete genomevirulence factor4e-2099.8
NC_014210:5752651:5752651575265157545161866Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,integral membrane protein MviN1e-1998.2
NC_017059:967309:9800579800579816791623Rhodospirillum photometricum DSM 122, complete genomeVirulence factor MVIN-like4e-1996.7
NC_009092:1263964:1264478126447812660371560Shewanella loihica PV-4, complete genomeintegral membrane protein MviN5e-1996.3
NC_014831:786011:7860117860117876121602Thermaerobacter marianensis DSM 12885 chromosome, complete genomeintegral membrane protein MviN3e-1893.6
NC_011894:6001144:6016648601664860181771530Methylobacterium nodulans ORS 2060, complete genomeintegral membrane protein MviN5e-1893.2
NC_007333:3626510:3628986362898636308691884Thermobifida fusca YX, complete genomevirulence factor MVIN-like3e-1790.5
NC_013171:1364464:1368087136808713696071521Anaerococcus prevotii DSM 20548, complete genomeintegral membrane protein MviN5e-1583.2
NC_011420:2692857:2697251269725126987921542Rhodospirillum centenum SW, complete genomeintegral membrane protein MviN7e-1479.3
NC_014774:239865:2575752575752591341560Candidatus Liberibacter solanacearum CLso-ZC1 chromosome, completeintegral membrane protein MviN5e-1376.3
NC_015633:2565753:2566760256676025683401581Vibrio anguillarum 775 chromosome chromosome I, complete sequenceMviN6e-1376.3
NC_009052:1211989:1211989121198912135481560Shewanella baltica OS155, complete genomeintegral membrane protein MviN6e-1376.3
NC_016901:1367443:1367443136744313690021560Shewanella baltica OS678 chromosome, complete genomeintegral membrane protein MviN8e-1375.9
NC_004347:3670145:3689664368966436912231560Shewanella oneidensis MR-1, complete genomeMviN protein3e-1273.9
NC_013171:1364464:1366438136643813679611524Anaerococcus prevotii DSM 20548, complete genomeintegral membrane protein MviN6e-1272.8
NC_013410:1591500:1623308162330816249001593Fibrobacter succinogenes subsp. succinogenes S85 chromosome,virulence factor MVIN family protein2e-1171.2
NC_015424:3890293:3910355391035539118751521Aeromonas veronii B565 chromosome, complete genomeintegral membrane protein MviN3e-1170.5
NC_008322:3585601:3605321360532136068801560Shewanella sp. MR-7, complete genomeintegral membrane protein MviN5e-1169.7
NC_013939:1417750:1437371143737114388521482Deferribacter desulfuricans SSM1, complete genomevirulence factor MviN1e-1068.9
NC_015873:924392:9357779357779372941518Megasphaera elsdenii DSM 20460, complete genomeintegral membrane protein MviN1e-0965.5
NC_014355:2635500:2651422265142226528011380Candidatus Nitrospira defluvii, complete genomevirulence factor mviN-like protein3e-0860.5
NC_012985:465354:4653544653544669101557Candidatus Liberibacter asiaticus str. psy62, complete genomeintegral membrane protein MviN4e-0860.1
NC_009617:1165539:1181367118136711828931527Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeintegral membrane protein MviN8e-0858.9
NC_009925:4864367:4868100486810048694851386Acaryochloris marina MBIC11017, complete genomevirulence factor MviN, putative5e-0756.6
NC_015635:5154730:5202418520241852040191602Microlunatus phosphovorus NM-1, complete genomehypothetical protein7e-0652.8
NC_018720:2138180:2138180213818021424034224Bifidobacterium asteroides PRL2011 chromosome, complete genomevirulence factor MVIN family protein7e-0652.8