Pre_GI Gene

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Host: NC_009708 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_009708:2347350 Yersinia pseudotuberculosis IP 31758 chromosome, complete genome

Host Lineage: Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is serotype 1b and was isolated in 1966 from the stools of a patient presenting with scarlet-like fever in the Primorski region of the former USSR. Environmental bacterium that causes gastrointestinal disease. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This organism was first isolated in 1883 by Malassez and Vignal and is termed pseudotuberculosis since it causes lesions in the lung that are similar to those observed during tuberculosis infection. It is ubiquitous in the environment and is a food and waterborne pathogen that affects animals as well as humans by causing gastroenteritis like Yersinia enterocolitica.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
23473502348114765copper homeostasis protein CutCQuickGO ontologyBLASTP
23483462348921576hypothetical proteinBLASTP
23489422349070129hypothetical proteinBLASTP
234948623512161731arginyl-tRNA synthetaseQuickGO ontologyBLASTP
235136623562134848adhesinhemagglutininQuickGO ontologyBLASTP
235625523577961542ShlBFhaCHecB family hemolysin secretionactivation proteinQuickGO ontologyBLASTP
235828923598241536integral membrane protein MviNQuickGO ontologyBLASTP
23600912361020930oxidoreductaseQuickGO ontologyBLASTP
23610132361714702hypothetical proteinBLASTP
23617222362306585ribosomal-protein-S5-alanine N-acetyltransferaseQuickGO ontologyBLASTP
236260023638051206multidrug resistance protein MdtHQuickGO ontologyBLASTP
23642222364785564hypothetical proteinBLASTP
23652392365799561TorD family cytoplasmic chaperoneQuickGO ontologyBLASTP
23658362366573738hydrolaseQuickGO ontologyBLASTP