Pre_GI: BLASTP Hits

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Query: NC_011205:609464:635672 Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853

Start: 635672, End: 636142, Length: 471

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a bovine-adapted serovar that is genetically related to S. Enteritidis that lives in the bovine intestinal tract and can causes disease in humans. While rare in incidence, S. dublin infection classically produces a syndrome of sustained bacteremia with fever, resulting in high morbidity and mortality. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012125:1330066:135341813534181353885468Salmonella enterica subsp. enterica serovar Paratyphi C straingp151e-62238
NC_011147:2496808:250358625035862504053468Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein2e-60230
NC_006511:2501500:250805025080502508499450Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein1e-56218
NC_011751:643976:663770663770664249480Escherichia coli UMN026 chromosome, complete genomeEndopeptidase from phage origin3e-55213
NC_011740:2072173:210037421003742100853480Escherichia fergusonii ATCC 35469, complete genomeEndopeptidase from phage origin (Lysis protein Rz)4e-53206
NC_020063:2565605:257162125716212572103483Enterobacteriaceae bacterium strain FGI 57, complete genomeBacteriophage lysis protein1e-49194
NC_017046:2756000:275602427560242756497474Salmonella enterica subsp. enterica serovar Typhimurium str. 798bacteriophage protein4e-46183
NC_011283:2836000:289710628971062897570465Klebsiella pneumoniae 342 chromosome, complete genomebacteriophage lysis protein9e-46182
NC_011205:1345511:137223813722381372738501Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853bacteriophage lysis protein8e-39159
NC_010067:2304313:232553223255322326428897Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein1e-38158
NC_016831:1734292:174088017408801741359480Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative phage lysozyme2e-34144
NC_011294:1220526:123638912363891236868480Salmonella enterica subsp. enterica serovar Enteritidis strphage lysozyme2e-34144
NC_011740:2769961:277523827752382775711474Escherichia fergusonii ATCC 35469, complete genomeputative murein endopeptidase; DLP12 prophage1e-28125
NC_007384:2933625:293316429331642933628465Shigella sonnei Ss046, complete genomeendopeptidase-like protein9e-29125
NC_011415:1472500:149739714973971497861465Escherichia coli SE11 chromosome, complete genomeputative phage endopeptidase9e-28122
NC_012947:2366000:237736123773612377825465Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completelysis protein1e-27122
NC_008563:1475500:148489514848951485371477Escherichia coli APEC O1, complete genomehypothetical protein4e-27120
NC_013941:699286:716243716243716716474Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeRz endopeptidase from lambdoid prophage DLP129e-27119
NC_012947:3015985:301598530159853016446462Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completelysis protein7e-27119
NC_007946:1239278:125891012589101259383474Escherichia coli UTI89, complete genomeputative Rz endopeptidase from lambdoid prophage DLP126e-27119
NC_008563:1175035:119629711962971196770474Escherichia coli APEC O1, complete genomeputative Rz endopeptidase from lambdoid prophage6e-27119
NC_011742:1177946:119983111998311200292462Escherichia coli S88 chromosome, complete genomemurein endopeptidase; DLP12 prophage6e-27119
CU928145:1773642:178211417821141782578465Escherichia coli 55989 chromosome, complete genomeputative murein endopeptidase; DLP12 prophage6e-27119
NC_011748:1773642:178211417821141782578465Escherichia coli 55989, complete genomeputative murein endopeptidase; DLP12 prophage6e-27119
NC_013361:3112023:311748531174853117946462Escherichia coli O26:H11 str. 11368 chromosome, complete genomeendopeptidase1e-26118
NC_000913:558920:577330577330577791462Escherichia coli K12, complete genomeDLP12 prophage; predicted murein endopeptidase3e-26117
NC_010473:498252:516662516662517123462Escherichia coli str. K-12 substr. DH10B, complete genomeDLP12 prophage; predicted murein endopeptidase3e-26117
NC_010473:623810:629922629922630383462Escherichia coli str. K-12 substr. DH10B, complete genomeDLP12 prophage; predicted murein endopeptidase3e-26117
AC_000091:558920:577330577330577791462Escherichia coli W3110 DNA, complete genomepredicted murein endopeptidase3e-26117
NC_012759:461680:480090480090480551462Escherichia coli BW2952 chromosome, complete genomeDLP12 prophage; putative murein endopeptidase3e-26117
NC_012967:531000:549576549576550037462Escherichia coli B str. REL606 chromosome, complete genomeputative murein endopeptidase1e-25115
NC_012947:3231893:323564232356423236103462Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completelysis protein1e-25115
NC_013364:3312379:333608333360833336550468Escherichia coli O111:H- str. 11128, complete genomeputative endopeptidase1e-24112
NC_011353:2957962:295885129588512959318468Escherichia coli O157:H7 str. EC4115 chromosome, complete genomebacteriophage lysis protein1e-24112
NC_011748:1408280:142983614298361430309474Escherichia coli 55989, complete genomeEndopeptidase (Lysis protein Rz)4e-24110
CU928145:1408280:142983614298361430309474Escherichia coli 55989 chromosome, complete genomeEndopeptidase (Lysis protein Rz)4e-24110
NC_013008:2910567:291361829136182914085468Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeendopeptidase of prophage CP-933U1e-23108
NC_002695:1929215:194614119461411946608468Escherichia coli O157:H7 str. Sakai, complete genomeputative endopeptidase1e-23108
NC_014121:3627588:365891236589123659370459Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completebacteriophage lysis protein9e-23105
NC_011083:374000:393885393885394322438Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,bacteriophage lysis protein2e-22104
NC_010067:2529750:257967425796742580111438Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein3e-22104
NC_006905:368942:392143392143392580438Salmonella enterica subsp. enterica serovar Choleraesuis strRz lysis protein4e-22103
CU928145:824367:838985838985839434450Escherichia coli 55989 chromosome, complete genomebacteriophage lysis protein1e-21102
NC_011748:824367:838985838985839434450Escherichia coli 55989, complete genomebacteriophage lysis protein1e-21102
NC_017328:303987:326072326072326509438Shigella flexneri 2002017 chromosome, complete genomeRz protein1e-21101
NC_009436:2776410:281037328103732810834462Enterobacter sp. 638, complete genomebacteriophage lysis protein3e-21100
NC_013364:2898964:290746329074632907900438Escherichia coli O111:H- str. 11128, complete genomeputative endopeptidase5e-21100
NC_009800:289000:309952309952310389438Escherichia coli HS, complete genomebacteriophage lysis protein6e-2199.8
NC_014562:1772842:177839417783941778870477Pantoea vagans C9-1 chromosome, complete genomeputative endopeptidase2e-1994.4
NC_016816:1970189:199332319933231993823501Pantoea ananatis LMG 5342, complete genomeputative phage endopeptidase3e-1787.4
NC_013892:2005480:200921120092112009678468Xenorhabdus bovienii SS-2004 chromosome, complete genomeendopeptidase (Protein gp15)5e-1580.1
NC_012967:1403733:141822514182251418524300Escherichia coli B str. REL606 chromosome, complete genomeputative defective peptidase1e-1479
AC_000091:1407693:142505914250591425358300Escherichia coli W3110 DNA, complete genomepredicted defective peptidase1e-1479
NC_000913:1404000:142136914213691421668300Escherichia coli K12, complete genomeRac prophage; predicted defective peptidase1e-1479
NC_010473:1493983:151076515107651511064300Escherichia coli str. K-12 substr. DH10B, complete genomeRac prophage; predicted defective peptidase1e-1479
NC_013892:671000:689248689248689727480Xenorhabdus bovienii SS-2004 chromosome, complete genomeRac prophage; prophage lambda endopeptidase1e-1375.9
NC_013282:1804909:182556518255651826029465Cronobacter turicensis, complete genomeEndopeptidase2e-0858.2