Pre_GI: BLASTP Hits

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Query: NC_011205:1186097:1199160 Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853

Start: 1199160, End: 1199852, Length: 693

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a bovine-adapted serovar that is genetically related to S. Enteritidis that lives in the bovine intestinal tract and can causes disease in humans. While rare in incidence, S. dublin infection classically produces a syndrome of sustained bacteremia with fever, resulting in high morbidity and mortality. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017046:1164176:117724611772461177938693Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein3e-132470
NC_011080:1209935:122300612230061223698693Salmonella enterica subsp. enterica serovar Newport str. SL254,oligogalacturonate-specific porin3e-132470
NC_011083:1216500:122538212253821226074693Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,oligogalacturonate-specific porin3e-132470
NC_006905:1186895:119996511999651200657693Salmonella enterica subsp. enterica serovar Choleraesuis strputative outer membrane protein3e-132470
NC_003197:1207597:122066612206661221358693Salmonella typhimurium LT2, complete genomeputative outer membrane protein3e-132470
NC_006511:1770000:177696617769661777658693Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative secreted protein3e-132470
NC_011147:1763681:177214917721491772841693Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein3e-132470
NC_011274:1094379:110744311074431108135693Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein3e-132470
NC_016810:1163919:117698911769891177681693Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein3e-132470
NC_016856:1165941:117901111790111179703693Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative outer membrane protein3e-132470
NC_016857:1163919:117698911769891177681693Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative outer membrane protein3e-132470
NC_016860:1205282:121835212183521219044693Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein3e-132470
NC_016863:1165232:117830211783021178994693Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative outer membrane protein3e-132470
NC_016831:1905289:191693819169381917630693Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein7e-132469
NC_011294:1085447:109853010985301099222693Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein8e-132469
NC_010102:1979742:198669119866911987383693Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein1e-131468
NC_011094:1166271:117934111793411180033693Salmonella enterica subsp. enterica serovar Schwarzengrund stroligogalacturonate-specific porin3e-130463
NC_016832:1838220:184621718462171846909693Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Oligogalacturonate-specific porin1e-129462
NC_004631:1842050:184936718493671850059693Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative secreted protein1e-129462
NC_003198:1117687:113075411307541131446693Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative secreted protein1e-129462
NC_010067:1782998:179103217910321791724693Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-127454
NC_020418:1397112:141511014151101415799690Morganella morganii subsp. morganii KT, complete genomeN-acetylneuraminic acid outer membrane channel protein NanC2e-84311
NC_020260:440000:460209460209460889681Cronobacter sakazakii Sp291, complete genomeoligogalacturonate-specific porin1e-40166
NC_012880:2399205:241863924186392419352714Dickeya dadantii Ech703, complete genomeOligogalacturonate-specific porin8e-30130
NC_015556:4118304:413354641335464134280735Pseudomonas fulva 12-X chromosome, complete genomeOligogalacturonate-specific porin6e-27120
NC_009436:522649:548020548020548721702Enterobacter sp. 638, complete genomeoligogalacturonate-specific porin5e-26117
NC_012779:996879:998704998704998883180Edwardsiella ictaluri 93-146, complete genomeoligogalacturonate-specific porin KdgM7e-2097.4
NC_014618:1593360:160421716042171604921705Enterobacter cloacae SCF1 chromosome, complete genomeOligogalacturonate-specific porin1e-1583.6
NC_014618:3482053:348572534857253486426702Enterobacter cloacae SCF1 chromosome, complete genomeOligogalacturonate-specific porin4e-1581.6
NC_013421:2720500:2721209272120927222671059Pectobacterium wasabiae WPP163, complete genomeOligogalacturonate-specific porin1e-1479.7
NC_007613:4403070:441257144125714413296726Shigella boydii Sb227, complete genomehypothetical protein2e-1169.7
NC_011750:4978000:498624049862404986956717Escherichia coli IAI39 chromosome, complete genomeN-acetylnuraminic acid outer membrane channel protein2e-1169.3
NC_007946:4875997:490351849035184904243726Escherichia coli UTI89, complete genomehypothetical protein2e-1169.3
NC_011751:5070597:507814450781445078860717Escherichia coli UMN026 chromosome, complete genomeN-acetylnuraminic acid outer membrane channel protein2e-1169.3
NC_009800:4529504:454378845437884544504717Escherichia coli HS, complete genomeoligogalacturonate-specific porin protein (KdgM)2e-1169.3
AC_000091:4534935:454346545434654544181717Escherichia coli W3110 DNA, complete genomeN-acetylnuraminic acid outer membrane channel protein2e-1169.3
NC_000913:4528278:453680845368084537524717Escherichia coli K12, complete genomeN-acetylnuraminic acid outer membrane channel protein2e-1169.3
NC_002695:5381576:539369353936935394409717Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein2e-1169.3
NC_008563:4905186:491974749197474920472726Escherichia coli APEC O1, complete genomehypothetical protein2e-1169.3
NC_008258:4345400:435638343563834357099717Shigella flexneri 5 str. 8401, complete genomehypothetical protein2e-1169.3
AP010958:5272863:529366252936625294378717Escherichia coli O103:H2 str. 12009 DNA, complete genomeN-acetylnuraminic acid outer membrane channel protein2e-1169.3
NC_008253:4817864:484401648440164844732717Escherichia coli 536, complete genomehypothetical protein YjhA precursor2e-1169.3
CP002185:4791811:480122848012284801944717Escherichia coli W, complete genomeN-acetylnuraminic acid outer membrane channel protein2e-1169.3
CU928160:4570498:459942945994294600145717Escherichia coli IAI1 chromosome, complete genomeN-acetylnuraminic acid outer membrane channel protein2e-1169.3
NC_010473:4630361:463861646386164639332717Escherichia coli str. K-12 substr. DH10B, complete genomeN-acetylnuraminic acid outer membrane channel protein2e-1169.3
CP002516:4199133:421092642109264211642717Escherichia coli KO11, complete genomeOligogalacturonate-specific porin2e-1169.3
NC_010498:4930649:494341049434104944126717Escherichia coli SMS-3-5, complete genomeN-acetylneuraminic acid porin NanC2e-1169.3
NC_011601:4856717:487740948774094878125717Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeN-acetylnuraminic acid outer membrane channel protein2e-1169.3
NC_013361:5580741:558730155873015588017717Escherichia coli O26:H11 str. 11368 chromosome, complete genomeN-acetylnuraminic acid outer membrane channel protein2e-1169.3
NC_004431:5123325:513350851335085134233726Escherichia coli CFT073, complete genomeHypothetical protein yjhA precursor2e-1169.3
NC_017328:4417000:442815144281514428876726Shigella flexneri 2002017 chromosome, complete genomeputative N-acetylneuraminic acid outer membrane channel protein nanC precursor2e-1169.3
NC_013941:5219841:523195852319585232683726Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein2e-1169.3
NC_016902:4199133:421092642109264211642717Escherichia coli KO11FL chromosome, complete genomeOligogalacturonate-specific porin2e-1169.3
NC_016822:4889656:490050649005064901222717Shigella sonnei 53G, complete genomeOligogalacturonate-specific porin2e-1169.3
NC_013364:5255700:526893352689335269649717Escherichia coli O111:H- str. 11128, complete genomeN-acetylnuraminic acid outer membrane channel protein2e-1169.3
NC_013353:5272863:529366252936625294378717Escherichia coli O103:H2 str. 12009, complete genomeN-acetylnuraminic acid outer membrane channel protein2e-1169.3
NC_013008:5411285:542340254234025424118717Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeN-acetylnuraminic acid outer membrane channel protein2e-1169.3
NC_012967:4510393:451892345189234519639717Escherichia coli B str. REL606 chromosome, complete genomeN-acetylnuraminic acid outer membrane channel protein2e-1169.3
NC_012947:3883484:389446938944693895185717Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeoligogalacturonate-specific porin2e-1169.3
NC_012759:4467288:447554344755434476259717Escherichia coli BW2952 chromosome, complete genomeN-acetylnuraminic acid outer membrane channel protein2e-1169.3
NC_011745:5114500:512505351250535125769717Escherichia coli ED1a chromosome, complete genomeN-acetylnuraminic acid outer membrane channel protein2e-1169.3
NC_011742:4873351:488160648816064882322717Escherichia coli S88 chromosome, complete genomeN-acetylnuraminic acid outer membrane channel protein2e-1169.3
NC_011741:4570498:459942945994294600145717Escherichia coli IAI1 chromosome, complete genomeN-acetylnuraminic acid outer membrane channel protein2e-1169.3
NC_009801:4882684:490101449010144901730717Escherichia coli E24377A, complete genomeoligogalacturonate-specific porin protein (KdgM)6e-1064.7
NC_013421:2720500:272238727223872723151765Pectobacterium wasabiae WPP163, complete genomeOligogalacturonate-specific porin2e-0962.8
NC_009792:1345500:135474313547431355540798Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein1e-0860.1
NC_011745:4862218:487319248731924873932741Escherichia coli ED1a chromosome, complete genomeputative N-acetylneuraminic acid outer membrane channel protein nanC2e-0859.7
NC_004431:3409389:347458534745853475325741Escherichia coli CFT073, complete genomeHypothetical protein yjhA precursor2e-0859.7
NC_011751:3453683:349769234976923498432741Escherichia coli UMN026 chromosome, complete genomeputative N-acetylneuraminic acid outer membrane channel protein nanC2e-0859.7
NC_020063:4653422:467165046716504672348699Enterobacteriaceae bacterium strain FGI 57, complete genomeouter membrane protein (porin)2e-0652.8
NC_015761:2982000:300626230062623007170909Salmonella bongori NCTC 12419, complete genomemembrane permease8e-0650.8