Pre_GI: BLASTP Hits

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Query: NC_010552:1212000:1212056 Burkholderia ambifaria MC40-6 chromosome 2, complete sequence

Start: 1212056, End: 1212973, Length: 918

Host Lineage: Burkholderia ambifaria; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This strain was isolated from a cystic fibrosis patient. These bacteria present great versatility to adapt to diverse environments, and are capable of degrading pollutants in water and soil, and fixing atmospheric nitrogen. This species include strains isolated from cystic fibrosis patients as well as strains with potential use in biocontrol.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007510:1959883:200160520016052002543939Burkholderia sp. 383 chromosome 1, complete sequencetranscriptional regulator, LysR family1e-54213
NC_012968:435532:436407436407437333927Methylotenera mobilis JLW8, complete genometranscriptional regulator, LysR family2e-49196
NC_014931:1044313:106457210645721065540969Variovorax paradoxus EPS chromosome, complete genometranscriptional regulator, LysR family4e-47188
NC_009654:3980289:398826739882673989187921Marinomonas sp. MWYL1, complete genomeLysR family transcriptional regulator9e-45180
NC_010995:4297361:431468343146834315576894Cellvibrio japonicus Ueda107, complete genometranscriptional regulator, LysR family1e-44180
NC_009792:714953:743736743736744710975Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein2e-44179
NC_008782:2062962:208606520860652087003939Acidovorax sp. JS42, complete genometranscriptional regulator, LysR family1e-42173
NC_008544:55451:672516725168213963Burkholderia cenocepacia HI2424 chromosome 3, complete sequencetranscriptional regulator, LysR family2e-42172
NC_008062:81338:894328943290394963Burkholderia cenocepacia AU 1054 chromosome 3, complete sequencetranscriptional regulator, LysR family2e-42172
NC_014618:1752434:179011517901151791032918Enterobacter cloacae SCF1 chromosome, complete genomeLysR family transcriptional regulator4e-42172
NC_013364:2645438:266562426656242666553930Escherichia coli O111:H- str. 11128, complete genomeputative DNA-binding transcriptional regulator4e-42171
NC_021066:460292:516210516210517100891Raoultella ornithinolytica B6, complete genomeLysR family transcriptional regulator3e-37155
NC_015663:4950000:496489549648954965776882Enterobacter aerogenes KCTC 2190 chromosome, complete genomeputative DNA-binding transcriptional regulator1e-32140
NC_013282:2026083:207551620755162076427912Cronobacter turicensis, complete genomeUncharacterized HTH-type transcriptional regulator ydhB2e-30133
NC_012559:1228280:127348512734851274396912Laribacter hongkongensis HLHK9, complete genomeTranscriptional regulator5e-30131
NC_010067:1507823:150884515088451509777933Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein3e-29129
NC_011094:1435347:147090514709051471837933Salmonella enterica subsp. enterica serovar Schwarzengrund strDNA-binding transcriptional regulator1e-28127
NC_003197:1471349:150699115069911507923933Salmonella typhimurium LT2, complete genomeputative transcriptional regulator7e-29127
NC_011080:1470794:150643115064311507363933Salmonella enterica subsp. enterica serovar Newport str. SL254,transcriptional regulator, LysR family7e-29127
NC_016856:1481325:151696715169671517899933Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative DNA-binding transcriptional regulator7e-29127
NC_016860:1469066:150467815046781505610933Salmonella enterica subsp. enterica serovar Typhimurium strputative DNA-binding transcriptional regulator7e-29127
NC_016863:1429516:146515814651581466090933Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative DNA-binding transcriptional regulator7e-29127
NC_012667:839318:845379845379846266888Vibrio cholerae MJ-1236 chromosome 2, complete genomeLysR family transcriptional regulator4e-28125
NC_012583:683887:689570689570690457888Vibrio cholerae O395 chromosome chromosome II, complete sequencetranscriptional regulator, LysR family4e-28125
NC_009456:557962:573485573485574372888Vibrio cholerae O395 chromosome 1, complete sequenceLysR family transcriptional regulator4e-28125
NC_014618:57707:688806888069809930Enterobacter cloacae SCF1 chromosome, complete genomeLysR family transcriptional regulator1e-26120
NC_004431:364000:423994423994424926933Escherichia coli CFT073, complete genomeHypothetical transcriptional regulator yahB1e-26120
NC_008563:318993:361062361062361994933Escherichia coli APEC O1, complete genomeputative DNA-bindng transcriptional regulator1e-26120
NC_007946:289425:359470359470360402933Escherichia coli UTI89, complete genomehypothetical transcriptional regulator YahB1e-26120
NC_020260:3457597:347862534786253479524900Cronobacter sakazakii Sp291, complete genomeLysR family transcriptional regulator1e-26120
NC_011415:351810:373570373570374502933Escherichia coli SE11 chromosome, complete genomeputative transcriptional regulator3e-26119
NC_005810:4306716:432485643248564325749894Yersinia pestis biovar Microtus str. 91001, complete genomeLysR family transcriptional regulator4e-26118
NC_017047:4379989:438281543828154383720906Rahnella aquatilis HX2 chromosome, complete genomeLysR family transcriptional regulator2e-25116
NC_015061:4286000:428892942889294289834906Rahnella sp. Y9602 chromosome, complete genomeLysR family transcriptional regulator2e-25116
NC_009901:2272206:228642722864272287326900Shewanella pealeana ATCC 700345, complete genometranscriptional regulator, LysR family1e-1894.4
NC_009512:1518113:152138515213851522308924Pseudomonas putida F1, complete genometranscriptional regulator, LysR family3e-1375.9
NC_007802:1991211:202428720242872025186900Jannaschia sp. CCS1, complete genometranscriptional regulator, LysR family4e-1375.9
NC_007509:1043602:105766410576641058587924Burkholderia sp. 383 chromosome 3, complete sequencetranscriptional regulator, LysR family8e-1374.7
NC_020126:9938287:994239099423909943310921Myxococcus stipitatus DSM 14675, complete genomeLysR family transcriptional regulator1e-1273.6
NC_015856:2488297:248829724882972489223927Collimonas fungivorans Ter331 chromosome, complete genomeputative transcriptional regulator3e-1169.7
NC_014532:3479674:350292735029273503820894Halomonas elongata DSM 2581, complete genometranscriptional regulator, LysR family2e-1169.7
NC_007520:2391675:240941324094132410312900Thiomicrospira crunogena XCL-2, complete genometranscriptional regulator, LysR family2e-1169.7
NC_011901:625712:652517652517653437921Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completeLysR family transcriptional regulator7e-1168.2
NC_009512:1518113:155322815532281554121894Pseudomonas putida F1, complete genometranscriptional regulator, LysR family9e-1064.3
NC_009512:2108686:213137721313772132363987Pseudomonas putida F1, complete genometranscriptional regulator, LysR family1e-0964.3
NC_011901:342777:345910345910346800891Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completeMetR family transcriptional regulator1e-0963.9
NC_015942:63440:847938479385725933Acidithiobacillus ferrivorans SS3 chromosome, complete genomeLysR family transcriptional regulator1e-0963.9
NC_016027:1357659:136676913667691367731963Gluconacetobacter xylinus NBRC 3288, complete genomeLysR family transcriptional regulator1e-0963.9
NC_014640:2693060:270094827009482701838891Achromobacter xylosoxidans A8 chromosome, complete genometranscriptional regulator2e-0963.5
NC_015379:2505233:254090225409022541798897Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative transcription factor, LysR family2e-0963.2
NC_014323:3195178:319868231986823199647966Herbaspirillum seropedicae SmR1 chromosome, complete genomeLysR family transcription regulator protein2e-0963.2
NC_003063:1128370:115103311510331151920888Agrobacterium tumefaciens str. C58 chromosome linear, completehypothetical protein4e-0962.4
NC_003305:922357:922836922836923723888Agrobacterium tumefaciens str. C58 chromosome linear, completetranscriptional regulator, LysR family4e-0962.4
NC_014323:5219154:522239252223925223279888Herbaspirillum seropedicae SmR1 chromosome, complete genomeMetE/MetH family transcription regulator protein5e-0962
NC_017256:30192:301923019231103912Buchnera aphidicola str. Ak (Acyrthosiphon kondoi) chromosome,transcriptional dual regulator6e-0961.6
NC_009092:1305355:132354813235481324423876Shewanella loihica PV-4, complete genometranscriptional regulator, LysR family7e-0961.6
NC_008554:2308500:232728923272892328215927Syntrophobacter fumaroxidans MPOB, complete genometranscriptional regulator, LysR family8e-0961.2
NC_009439:442890:484747484747485631885Pseudomonas mendocina ymp, complete genomeLysR family transcriptional regulator2e-0860.1
NC_012912:4428111:445503544550354455973939Dickeya zeae Ech1591, complete genometranscriptional regulator, LysR family2e-0859.7
NC_014394:942015:958206958206959108903Gallionella capsiferriformans ES-2 chromosome, complete genometranscriptional regulator, LysR family3e-0859.3
NC_013757:1343396:136046913604691361407939Geodermatophilus obscurus DSM 43160, complete genometranscriptional regulator, LysR family4e-0858.9
NC_012660:3320330:334954233495423350447906Pseudomonas fluorescens SBW25 chromosome, complete genomeputative LysR family transcriptional regulator6e-0858.5
NC_009659:543000:559636559636560520885Janthinobacterium sp. Marseille chromosome, complete genomeLysR family transcriptional regulator6e-0858.5
NC_015376:2010009:201488020148802015788909Burkholderia gladioli BSR3 chromosome chromosome 2, completeLysR family transcriptional regulator8e-0858.2
NC_010501:2609567:264371826437182644620903Pseudomonas putida W619, complete genometranscriptional regulator, LysR family8e-0858.2
NC_011149:2040396:204687320468732047751879Salmonella enterica subsp. enterica serovar Agona str. SL483,transcriptional regulator, LysR family1e-0757.4
NC_011094:2061000:206856020685602069438879Salmonella enterica subsp. enterica serovar Schwarzengrund strtranscriptional regulator, LysR family protein1e-0757.4
NC_010501:3448389:346304234630423463947906Pseudomonas putida W619, complete genometranscriptional regulator, LysR family1e-0757.4
NC_008095:2450500:246221424622142463125912Myxococcus xanthus DK 1622, complete genometranscriptional activator, LysR family1e-0757.4
NC_007509:971500:979048979048979938891Burkholderia sp. 383 chromosome 3, complete sequencetranscriptional regulator, LysR family1e-0757.4
NC_004129:1741816:176837617683761769269894Pseudomonas fluorescens Pf-5, complete genometranscriptional regulator, LysR family2e-0757
NC_003197:2720726:272072627207262721652927Salmonella typhimurium LT2, complete genomeputative transcriptional regulator2e-0757
NC_016860:2716152:271615227161522717078927Salmonella enterica subsp. enterica serovar Typhimurium strputative transcriptional regulator2e-0757
NC_017046:2717810:271781027178102718736927Salmonella enterica subsp. enterica serovar Typhimurium str. 798transcriptional regulator2e-0757
NC_004578:4708220:471062747106274711544918Pseudomonas syringae pv. tomato str. DC3000, complete genometranscriptional activator MetR2e-0757
NC_020410:2509057:252344325234432524342900Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeputative transcriptional regulator (LysR family)2e-0756.6
NC_015726:2177783:219436621943662195274909Cupriavidus necator N-1 chromosome 1, complete sequenceLysR family transcriptional regulator2e-0756.6
NC_006677:2402282:242201324220132422906894Gluconobacter oxydans 621H, complete genomeTranscriptional activator2e-0756.6
NC_009436:1679265:167926516792651680176912Enterobacter sp. 638, complete genomeLysR family transcriptional regulator2e-0756.6
NC_015224:279037:300333300333301286954Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,LysR family transcriptional regulator3e-0756.2
NC_009648:2465613:249552524955252496424900Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeLysR family transcriptional regulator4e-0755.8
NC_012731:3193880:321793232179323218831900Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeLysR family transcriptional regulator4e-0755.8
NC_016845:3238507:326673232667323267631900Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,LysR family transcriptional regulator4e-0755.8
NC_009831:4539952:455655145565514557429879Shewanella sediminis HAW-EB3, complete genomeconserved hypothetical transcriptional regulator4e-0755.5
NC_010519:1764261:176500017650001765926927Haemophilus somnus 2336 chromosome, complete genomeLysR family transcriptional regulator6e-0755.1
NC_008309:1155218:116023611602361161162927Haemophilus somnus 129PT, complete genometranscriptional regulator6e-0755.1
NC_018080:2732962:275278127527812753704924Pseudomonas aeruginosa DK2 chromosome, complete genometranscriptional regulator6e-0755.1
NC_009656:2801885:284269028426902843613924Pseudomonas aeruginosa PA7 chromosome, complete genometranscriptional regulator6e-0755.1
NC_013740:1178370:120693412069341207851918Acidaminococcus fermentans DSM 20731, complete genometranscriptional regulator, LysR family6e-0755.1
NC_016745:2028424:206469420646942065572879Oceanimonas sp. GK1 chromosome, complete genomeLysR family transcriptional regulator9e-0754.3
NC_007347:1215358:122528012252801226188909Ralstonia eutropha JMP134 chromosome 1, complete sequenceregulatory protein, LysR:LysR, substrate-binding1e-0654.3
NC_010170:4463000:447458844745884475481894Bordetella petrii, complete genometranscriptional regulator, LysR family1e-0653.9
NC_016830:1719407:174279817427981743691894Pseudomonas fluorescens F113 chromosome, complete genomeLysR family transcriptional regulator1e-0653.9
NC_020911:1859210:187856918785691879453885Octadecabacter antarcticus 307, complete genomeLysR family transcriptional regulator1e-0653.9
NC_016514:1183356:118534511853451186274930Enterobacter cloacae EcWSU1 chromosome, complete genomemau operon transcriptional activator1e-0653.9
NC_011283:2836000:287450628745062875426921Klebsiella pneumoniae 342 chromosome, complete genomeLysR family transcriptional regulator2e-0653.5
NC_009778:1717458:175198417519841752856873Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein2e-0653.1
NC_013406:3975512:398048739804873981392906Paenibacillus sp. Y412MC10 chromosome, complete genomeLysR family transcriptional regulator3e-0652.8
NC_014532:2268078:229234622923462293248903Halomonas elongata DSM 2581, complete genometranscriptional regulator, LysR family4e-0652.4
NC_007974:1007834:102467010246701025593924Ralstonia metallidurans CH34 chromosome 2, complete sequencetranscriptional regulator, LysR family4e-0652.4
NC_013850:2846069:286444228644422865362921Klebsiella variicola At-22 chromosome, complete genometranscriptional regulator, LysR family6e-0652
NC_013851:3142182:316147431614743162442969Allochromatium vinosum DSM 180 chromosome, complete genometranscriptional regulator, LysR family5e-0652
NC_013446:2961647:298750229875022988374873Comamonas testosteroni CNB-2, complete genometranscriptional regulator, LysR family6e-0651.6
NC_013850:3303500:332702833270283327918891Klebsiella variicola At-22 chromosome, complete genometranscriptional regulator, LysR family8e-0651.6
NC_006841:1264555:128656712865671287454888Vibrio fischeri ES114 chromosome II, complete sequencetranscriptional regulators, LysR family9e-0651.2
NC_010682:1482365:149783114978311498769939Ralstonia pickettii 12J chromosome 1, complete sequencetranscriptional regulator, LysR family9e-0651.2
NC_013592:1465015:148628514862851487232948Dickeya dadantii Ech586, complete genometranscriptional regulator, LysR family9e-0651.2