Pre_GI: BLASTP Hits

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Query: NC_010001:1488000:1497514 Clostridium phytofermentans ISDg, complete genome

Start: 1497514, End: 1497816, Length: 303

Host Lineage: Lachnoclostridium phytofermentans; Lachnoclostridium; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolated from forest soil near the Quabbin Reservoir in Massachusetts, USA. This organism plays an important industrial and ecological role in the anaerobic fermentation of cellulose and produces economically significant levels of acetate and ethanol. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007946:4875997:487599748759974876281285Escherichia coli UTI89, complete genomehypothetical protein3e-1167
NC_007946:4875997:487629948762994876577279Escherichia coli UTI89, complete genomehypothetical protein7e-1165.9
NC_014633:442755:457236457236457805570Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequencemicrocompartments protein1e-1065.1
NC_015589:2100175:210169421016942101993300Desulfotomaculum ruminis DSM 2154 chromosome, complete genomemicrocompartments protein2e-0961.2
NC_016584:5625975:564441856444185644708291Desulfosporosinus orientis DSM 765 chromosome, complete genomecarbon dioxide concentrating mechanism/carboxysome shell protein2e-0961.2
NC_009495:2244774:225992722599272260223297Clostridium botulinum A str. ATCC 3502 chromosome, complete genomemicrocompartments family protein5e-0856.6
NC_009697:2173000:218856921885692188865297Clostridium botulinum A str. ATCC 19397 chromosome, completemicrocompartments family protein5e-0856.6
NC_009698:2171151:218878821887882189084297Clostridium botulinum A str. Hall chromosome, complete genomemicrocompartments family protein5e-0856.6
NC_009699:2287893:230914623091462309442297Clostridium botulinum F str. Langeland chromosome, complete genomemicrocompartments family protein4e-0856.6
NC_012658:2295536:231729723172972317593297Clostridium botulinum Ba4 str. 657 chromosome, complete genomemicrocompartments family protein4e-0856.6
NC_017297:2288000:230926223092622309558297Clostridium botulinum F str. 230613 chromosome, complete genomebacterial microcompartments family protein4e-0856.6
NC_016584:5625975:564473956447395645038300Desulfosporosinus orientis DSM 765 chromosome, complete genomecarbon dioxide concentrating mechanism/carboxysome shell protein4e-0856.6
NC_009922:2556033:257735025773502577652303Alkaliphilus oremlandii OhILAs, complete genomemicrocompartments protein4e-0856.6
NC_009438:212476:231372231372231674303Shewanella putrefaciens CN-32 chromosome, complete genomemicrocompartments protein7e-0855.8
NC_009922:411434:421122421122421499378Alkaliphilus oremlandii OhILAs, complete genomemicrocompartments protein1e-0755.5
NC_008750:450233:468932468932469234303Shewanella sp. W3-18-1, complete genomemicrocompartment protein1e-0755.5
NC_015589:2100175:210202421020242102323300Desulfotomaculum ruminis DSM 2154 chromosome, complete genomemicrocompartments protein1e-0755.1
NC_004557:2289135:229392922939292294486558Clostridium tetani E88, complete genomeputative ethanolamine utilization protein5e-0753.1
NC_012563:2384500:239304423930442393841798Clostridium botulinum A2 str. Kyoto, complete genomebacterial microcompartments family protein9e-0752.4
NC_009495:2244774:224964022496402250437798Clostridium botulinum A str. ATCC 3502 chromosome, complete genomepropanediol/ethanolamine utilization protein9e-0752.4
NC_009697:2173000:217828221782822179079798Clostridium botulinum A str. ATCC 19397 chromosome, completemicrocompartments family protein9e-0752.4
NC_009698:2171151:217850121785012179298798Clostridium botulinum A str. Hall chromosome, complete genomemicrocompartments family protein9e-0752.4
NC_012658:2295536:230715823071582307961804Clostridium botulinum Ba4 str. 657 chromosome, complete genomemicrocompartments family protein9e-0752.4
NC_009699:2287893:229877522987752299659885Clostridium botulinum F str. Langeland chromosome, complete genomecarbon dioxide concentrating mechanism protein CcmK-like protein8e-0752.4
NC_017297:2288000:229888722988872299771885Clostridium botulinum F str. 230613 chromosome, complete genomebacterial microcompartments family protein8e-0752.4
NC_014019:3543389:355019435501943550607414Bacillus megaterium QM B1551 chromosome, complete genomeethanolamine utilization protein8e-0752.4
NC_010723:1465097:147156114715611471866306Clostridium botulinum E3 str. Alaska E43, complete genomepropanediol utilization protein PduA1e-0651.6
NC_010674:1496500:150134815013481501653306Clostridium botulinum B str. Eklund 17B, complete genomepropanediol utilization protein PduA2e-0651.2
NC_012488:1159463:116989211698921170329438Listeria monocytogenes Clip81459, complete genomePduK protein3e-0650.4
NC_018664:3009166:304535030453503045625276Clostridium acidurici 9a chromosome, complete genomemicrocompartment protein3e-0650.4
NC_014633:442755:457828457828458106279Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequencemicrocompartments protein3e-0650.4
NC_014328:4316008:433563543356354335931297Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative microcompartment shellprotein3e-0650.4
NC_003366:1091766:110310211031021103887786Clostridium perfringens str. 13, complete genomepropanediol utilization protein3e-0650.4
NC_008261:1048515:105986010598601060624765Clostridium perfringens ATCC 13124, complete genomeethanolamine utilization protein3e-0650.4
NC_010296:4384000:439597043959704396281312Microcystis aeruginosa NIES-843, complete genomecarbon dioxide concentrating mechanism protein4e-0650.1
NC_011726:1665315:167237316723731672708336Cyanothece sp. PCC 8801, complete genomemicrocompartments protein4e-0650.1
NC_009633:3933941:395239939523993952701303Alkaliphilus metalliredigens QYMF chromosome, complete genomemicrocompartments protein4e-0650.1
NC_008319:1727686:174459617445961745027432Synechococcus sp. CC9311, complete genomepossible carbon dioxide concentrating mechanism protein CcmK4e-0650.1
NC_014501:3210323:321974232197423220080339Cyanothece sp. PCC 7822 chromosome, complete genomemicrocompartments protein4e-0650.1
NC_004557:1553000:155794115579411558630690Clostridium tetani E88, complete genomecarbon dioxide concentrating mechanism protein ccmK homolog4e-0650.1
NC_011729:1496848:150861315086131508951339Cyanothece sp. PCC 7424 chromosome, complete genomemicrocompartments protein4e-0650.1
NC_011726:1665315:167198016719801672291312Cyanothece sp. PCC 8801, complete genomemicrocompartments protein4e-0650.1
NC_005072:508827:518725518725519021297Prochlorococcus marinus subsp. pastoris str. CCMP1986, completecarboxysome shell protein CsoS16e-0649.7
NC_015581:1791658:180071418007141801022309Thioalkalimicrobium cyclicum ALM1 chromosome, complete genomemicrocompartments protein5e-0649.7
NC_013766:1202713:121184412118441212281438Listeria monocytogenes 08-5578 chromosome, complete genomehypothetical protein5e-0649.7
NC_014501:3210323:321896932189693219280312Cyanothece sp. PCC 7822 chromosome, complete genomemicrocompartments protein7e-0649.3
NC_008817:539349:549224549224549535312Prochlorococcus marinus str. MIT 9515, complete genomecarboxysome shell protein CsoS17e-0649.3
NC_016584:5625975:562987456298745630164291Desulfosporosinus orientis DSM 765 chromosome, complete genomecarbon dioxide concentrating mechanism/carboxysome shell protein8e-0649.3
NC_014654:1113116:111742211174221117691270Halanaerobium sp. 'sapolanicus' chromosome, complete genomemicrocompartments protein8e-0649.3
NC_007520:903799:923593923593923901309Thiomicrospira crunogena XCL-2, complete genomemicrocompartments protein8e-0649.3
NC_007520:903799:922956922956923246291Thiomicrospira crunogena XCL-2, complete genomemicrocompartments protein8e-0649.3
NC_011729:1496848:150941815094181509729312Cyanothece sp. PCC 7424 chromosome, complete genomemicrocompartments protein7e-0649.3
NC_008816:518895:528795528795529106312Prochlorococcus marinus str. AS9601, complete genomecarboxysome shell protein CsoS17e-0649.3
NC_008819:541000:548895548895549206312Prochlorococcus marinus str. NATL1A, complete genomecarboxysome shell protein CsoS16e-0649.3
NC_007335:1820332:182903218290321829343312Prochlorococcus marinus str. NATL2A, complete genomecarboxysome shell protein CsoS16e-0649.3
NC_005042:513931:524074524074524385312Prochlorococcus marinus subsp. marinus str. CCMP1375, completeCarboxysome shell peptide, CsoS16e-0649.3
NC_009091:493302:503223503223503534312Prochlorococcus marinus str. MIT 9301, complete genomecarboxysome shell protein CsoS17e-0649.3
NC_009840:544816:554730554730555041312Prochlorococcus marinus str. MIT 9215, complete genomecarboxysome shell protein CsoS17e-0649.3
NC_007577:503440:513352513352513663312Prochlorococcus marinus str. MIT 9312, complete genomecarboxysome shell protein CsoS17e-0649.3
NC_014328:4316008:433529343352934335595303Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative microcompartment shellprotein9e-0648.9
NC_007520:903799:923273923273923566294Thiomicrospira crunogena XCL-2, complete genomemicrocompartments protein9e-0648.9
NC_009922:411434:420510420510420776267Alkaliphilus oremlandii OhILAs, complete genomemicrocompartments protein9e-0648.9
NC_014614:284005:296676296676297182507Clostridium sticklandii, complete genomehypothetical protein1e-0548.9