Pre_GI: BLASTP Hits

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Query: NC_009654:4716417:4733100 Marinomonas sp. MWYL1, complete genome

Start: 4733100, End: 4734053, Length: 954

Host Lineage: Marinomonas; Marinomonas; Oceanospirillaceae; Oceanospirillales; Proteobacteria; Bacteria

General Information: Marinomonas MWYL1 was isolated from the root surface of the salt marsh grass Spartina anglica, growing near the North Norfolk, England village of Stiffkey. The genus Marinomonas comprises a widespread group of g -proteobacteria that exist in coastal waters, and which had been earlier been included in the genus Alteromonas. The interest in Marinomonas MWYL 1 was that it could grow on the betaine molecule Dimethylsulphoniopropionate (DMSP) as sole carbon source and, when it did do, it released large amounts of the gas dimethyl sulphide. DMSP is a compatible solute that is used by many marine phytoplankton and seaweed macroalgae as an osmoticum and an anti-stress compound. In addition, a few known land angiosperms make DMSP and these include certain species of Spartina - hence the choice of these plants as a source for DMSP-degrading bacteria. Indeed, others had shown previously that the DMSP-catabolising bacteria isolated from Spartina root surfaces included Marinomonas strains.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012724:2443500:2454964245496424559741011Burkholderia glumae BGR1 chromosome 1, complete genomePutative carbohydrate ABC transporter, periplasmic sugar-binding protein5e-96351
NC_008800:2806827:280840028084002809392993Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,ABC transporter substrate-binding protein2e-57223
NC_007644:626992:637402637402638382981Moorella thermoacetica ATCC 39073, complete genomePeriplasmic binding protein/LacI transcriptional regulator7e-2098.2
NC_015732:140087:147960147960148913954Spirochaeta caldaria DSM 7334 chromosome, complete genomeperiplasmic binding protein/LacI transcriptional regulator6e-1685.1
NC_015145:1107500:1120857112085711220141158Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genomemonosaccharide ABC transporter substrate-binding protein, CUT2 family1e-1480.9
NC_005125:839000:860764860764861717954Gloeobacter violaceus PCC 7421, complete genomeperiplasmic sugar binding protein of ABC transport system2e-1377
NC_015732:140087:149047149047149997951Spirochaeta caldaria DSM 7334 chromosome, complete genomeperiplasmic binding protein/LacI transcriptional regulator4e-1375.9
NC_012785:638000:649402649402650280879Kosmotoga olearia TBF 19.5.1, complete genomeperiplasmic binding protein/LacI transcriptional regulator7e-1374.7
NC_015589:1468774:149197714919771492936960Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeperiplasmic binding protein/LacI transcriptional regulator8e-1374.7
NC_013205:2332174:233878923387892339754966Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,periplasmic binding protein/LacI transcriptional regulator5e-1272
NC_009655:195500:207716207716208648933Actinobacillus succinogenes 130Z chromosome, complete genomeperiplasmic binding protein/LacI transcriptional regulator8e-1271.6
NC_015968:1165829:116906511690651170006942Enterobacter asburiae LF7a chromosome, complete genomeperiplasmic binding protein/LacI transcriptional regulator1e-1170.9
NC_015566:2039431:206700920670092067938930Serratia sp. AS12 chromosome, complete genomeperiplasmic binding protein/LacI transcriptional regulator1e-1170.9
NC_016835:405482:4067864067864078531068Rahnella aquatilis CIP 78.65 = ATCC 33071 plasmid pRahaq201,sugar ABC transporter periplasmic protein1e-1170.5
NC_013929:6526745:653297265329726533718747Streptomyces scabiei 87.22 chromosome, complete genomecarbohydrate-binding protein2e-1170.1
NC_014039:15236:203392033921280942Propionibacterium acnes SK137 chromosome, complete genomeribose ABC transport system, permease protein RbsC/ribose ABC transport system, periplasmic ribose-binding protein RbsB3e-1169.3
NC_016113:11500:2570925709276581950Streptomyces cattleya NRRL 8057 plasmid pSCAT, complete sequenceD-ribose ABC transporter permease3e-1169.3
NC_020211:3535622:355672535567253557642918Serratia marcescens WW4, complete genomeribose ABC superfamily ATP binding cassette transporter, binding protein4e-1168.9
NC_016633:2655811:266334826633482664292945Sphaerochaeta pleomorpha str. Grapes chromosome, complete genomesugar ABC transporter periplasmic protein6e-1168.6
NC_007348:752692:775547775547776515969Ralstonia eutropha JMP134 chromosome 2, complete sequencePeriplasmic binding protein/LacI transcriptional regulator7e-1168.2
NC_019897:2696587:270632827063282707290963Thermobacillus composti KWC4 chromosome, complete genomesugar ABC transporter substrate-binding protein1e-1067.4
NC_008541:2037793:204289820428982043854957Arthrobacter sp. FB24 chromosome 1, complete sequenceperiplasmic binding protein/LacI transcriptional regulator2e-1067
NC_014837:2709813:271725127172512718174924Pantoea sp. At-9b chromosome, complete genomeperiplasmic-binding protein/LacI transcriptional regulator2e-1066.6
NC_016512:15102:202062020621147942Propionibacterium acnes TypeIA2 P.acn17 chromosome, completeperiplasmic sugar-binding protein3e-1066.2
NC_016511:15100:202042020421145942Propionibacterium acnes TypeIA2 P.acn31 chromosome, completeperiplasmic sugar-binding protein3e-1066.2
NC_006085:15246:203502035021291942Propionibacterium acnes KPA171202, complete genomeperiplasmic sugar-binding protein3e-1066.2
NC_003155:6444500:6444518644451864464641947Streptomyces avermitilis MA-4680, complete genomeD-ribose ABC transporter permease protein5e-1065.5
NC_020908:4550414:4559237455923745604211185Octadecabacter arcticus 238, complete genomesugar ABC transporter periplasmatic substrate-binding protein7e-1064.7
NC_015161:1556766:156531915653191566305987Deinococcus proteolyticus MRP chromosome, complete genomeperiplasmic binding protein/LacI transcriptional regulator1e-0964.3
NC_016516:15102:202062020621147942Propionibacterium acnes TypeIA2 P.acn33 chromosome, completeperiplasmic sugar-binding protein1e-0964.3
NC_010556:2328303:234419623441962345110915Exiguobacterium sibiricum 255-15, complete genomeperiplasmic binding protein/LacI transcriptional regulator1e-0964.3
NC_021177:7159654:7177869717786971798241956Streptomyces fulvissimus DSM 40593, complete genomeD-ribose ABC transporter permease protein1e-0963.9
NC_018665:2163713:218209821820982183012915Exiguobacterium antarcticum B7 chromosome, complete genomePeriplasmic binding protein/LacI transcriptional regulator2e-0963.5
NC_015137:2616222:264696226469622647912951Burkholderia sp. CCGE1001 chromosome 2, complete sequenceperiplasmic-binding protein/LacI transcriptional regulator8e-0961.6
NC_006510:1921541:192787719278771928833957Geobacillus kaustophilus HTA426, complete genomesugar ABC transporter (sugar-binding protein)1e-0860.8
NC_014654:188835:189917189917190873957Halanaerobium sp. 'sapolanicus' chromosome, complete genomebifunctional carbohydrate binding and transport protein2e-0860.1
NC_012559:1635922:163844016384401639369930Laribacter hongkongensis HLHK9, complete genomeRbsB2e-0860.1
NC_014650:2143033:215129121512912152265975Geobacillus sp. Y4.1MC1 chromosome, complete genomeperiplasmic binding protein/LacI transcriptional regulator2e-0859.7
NC_014246:611275:6280366280366290371002Mobiluncus curtisii ATCC 43063 chromosome, complete genomeribose ABC transporter ATP-binding protein4e-0858.9
NC_011899:1021672:103036310303631031325963Halothermothrix orenii H 168, complete genomeperiplasmic binding protein/LacI transcriptional regulator6e-0858.5
NC_007759:1028977:106955510695551070553999Syntrophus aciditrophicus SB, complete genomeABC-type sugar transport system, periplasmic component6e-0858.5
NC_015145:1107500:1116118111611811172721155Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genomemonosaccharide ABC transporter substrate-binding protein, CUT2 family6e-0858.5
NC_011978:1581994:158656415865641587544981Thermotoga neapolitana DSM 4359, complete genomeRibose ABC transporter, periplasmic ribose-binding protein1e-0757.8
NC_000853:960248:975775975775976746972Thermotoga maritima MSB8, complete genomeribose ABC transporter, periplasmic ribose-binding protein1e-0757.8
NC_015578:3914189:393737439373743938363990Treponema primitia ZAS-2 chromosome, complete genomeD-ribose-binding periplasmic protein1e-0757.8
NC_009792:3665369:3700402370040237014601059Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein9e-0857.8
NC_015687:1478668:149652614965261497485960Clostridium acetobutylicum DSM 1731 chromosome, complete genomeperiplasmic sugar-binding protein1e-0757.4
NC_005810:2549680:257686525768652577782918Yersinia pestis biovar Microtus str. 91001, complete genomesugar binding protein precursor1e-0757.4
NC_003143:2804500:281081128108112811728918Yersinia pestis CO92, complete genomesugar binding protein precursor1e-0757.4
NC_010159:1818500:182484918248491825766918Yersinia pestis Angola, complete genomeribose ABC transporter, periplasmic ribose-binding protein1e-0757.4
NC_008149:2366500:237259523725952373512918Yersinia pestis Nepal516, complete genomesugar binding protein precursor1e-0757.4
NC_004088:1851500:186044218604421861359918Yersinia pestis KIM, complete genomesolute binding protein of ABC transporter1e-0757.4
NC_009381:2138625:216301921630192163936918Yersinia pestis Pestoides F chromosome, complete genomesugar binding protein1e-0757.4
NC_009708:1735903:174822617482261749143918Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeribose ABC transporter periplasmic protein1e-0757.4
NC_014029:2756500:276313427631342764051918Yersinia pestis Z176003 chromosome, complete genomesugar binding protein1e-0757.4
NC_017154:2804000:281028428102842811201918Yersinia pestis D106004 chromosome, complete genomesugar binding protein1e-0757.4
NC_017168:2941938:295070829507082951625918Yersinia pestis A1122 chromosome, complete genomesugar binding protein1e-0757.4
NC_017265:1571305:158152315815231582440918Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,sugar binding protein1e-0757.4
NC_006155:2979500:300397330039733004890918Yersinia pseudotuberculosis IP 32953, complete genomeABC transporter, periplasmic sugar (possibly sorbitol) binding protein2e-0756.6
NC_010634:2894631:292192029219202922837918Yersinia pseudotuberculosis PB1/+, complete genomeperiplasmic binding protein/LacI transcriptional regulator2e-0756.6
NC_014623:243593:243593243593244555963Stigmatella aurantiaca DW4/3-1 chromosome, complete genomed-ribose-binding periplasmic protein2e-0756.6
NC_010184:661226:672022672022672945924Bacillus weihenstephanensis KBAB4, complete genomeMonosaccharide-transporting ATPase2e-0756.6
NC_015519:686027:7030847030847040851002Tepidanaerobacter sp. Re1 chromosome, complete genomeperiplasmic binding protein/LacI transcriptional regulator3e-0756.2
NC_014364:3238374:324759232475923248554963Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeperiplasmic binding protein/LacI transcriptional regulator4e-0755.8
NC_016614:686887:702059702059702937879Vibrio sp. EJY3 chromosome 2, complete sequenceD-ribose transporter subunit RbsB4e-0755.8
NC_017218:1655009:167658716765871677531945Bifidobacterium breve ACS-071-V-Sch8b chromosome, complete genomeD-ribose-binding periplasmic protein5e-0755.5
NC_010634:4463727:446372744637274464671945Yersinia pseudotuberculosis PB1/+, complete genomeperiplasmic binding protein/LacI transcriptional regulator8e-0754.7
NC_011969:726369:736252736252737178927Bacillus cereus Q1 chromosome, complete genomeribose ABC transporter substrate-binding protein1e-0654.3
NC_004578:3921199:393944239394423940371930Pseudomonas syringae pv. tomato str. DC3000, complete genomesugar ABC transporter, periplasmic sugar-binding protein2e-0653.9
NC_016771:701909:714612714612715538927Bacillus cereus NC7401, complete genomeribose ABC transporter substrate-binding protein1e-0653.9
NC_011725:681387:690825690825691751927Bacillus cereus B4264 chromosome, complete genomeribose ABC transporter ribose-binding protein2e-0653.5
NC_011772:647778:658732658732659658927Bacillus cereus G9842, complete genomeribose ABC transporter, ribose-binding protein2e-0653.5
NC_009328:1903291:192429219242921925248957Geobacillus thermodenitrificans NG80-2 chromosome, complete genomeD-ribose-binding periplasmic protein2e-0653.1
NC_008593:1797000:181560418156041816518915Clostridium novyi NT, complete genomeribose ABC transporter, periplasmic D-ribose-binding protein6e-0652
NC_015422:4508028:454405145440514545031981Alicycliphilus denitrificans K601 chromosome, complete genomeperiplasmic binding protein/LacI transcriptional regulator7e-0651.6
NC_014532:3479674:348872534887253489708984Halomonas elongata DSM 2581, complete genomeABC-type transport system periplasmic substrate-binding protein8e-0651.6
NC_014364:3707311:372173937217393722686948Spirochaeta smaragdinae DSM 11293 chromosome, complete genomesugar ABC transporter (sugar-binding protein)1e-0551.2