Pre_GI: BLASTP Hits

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Query: NC_009654:4624459:4625689 Marinomonas sp. MWYL1, complete genome

Start: 4625689, End: 4626708, Length: 1020

Host Lineage: Marinomonas; Marinomonas; Oceanospirillaceae; Oceanospirillales; Proteobacteria; Bacteria

General Information: Marinomonas MWYL1 was isolated from the root surface of the salt marsh grass Spartina anglica, growing near the North Norfolk, England village of Stiffkey. The genus Marinomonas comprises a widespread group of g -proteobacteria that exist in coastal waters, and which had been earlier been included in the genus Alteromonas. The interest in Marinomonas MWYL 1 was that it could grow on the betaine molecule Dimethylsulphoniopropionate (DMSP) as sole carbon source and, when it did do, it released large amounts of the gas dimethyl sulphide. DMSP is a compatible solute that is used by many marine phytoplankton and seaweed macroalgae as an osmoticum and an anti-stress compound. In addition, a few known land angiosperms make DMSP and these include certain species of Spartina - hence the choice of these plants as a source for DMSP-degrading bacteria. Indeed, others had shown previously that the DMSP-catabolising bacteria isolated from Spartina root surfaces included Marinomonas strains.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015857:731982:7529317529317539621032Brucella pinnipedialis B2/94 chromosome chromosome 1, completeamino acid ABC transporter periplasmic amino acid-binding protein2e-90332
NC_013119:707804:7294557294557304861032Brucella microti CCM 4915 chromosome 1, complete sequenceamino acid ABC transporter substrate-binding protein3e-90332
NC_009505:727694:7493137493137503441032Brucella ovis ATCC 25840 chromosome I, complete sequenceamino acid ABC transporter periplasmic amino acid-binding protein3e-90332
NC_017248:721764:7433757433757444061032Brucella melitensis NI chromosome chromosome I, complete sequencegeneral L-amino acid-binding periplasmic protein AAPJ precursor1e-89330
NC_008702:1432952:1449038144903814500721035Azoarcus sp. BH72, complete genomeputative amino acid-binding protein1e-87323
NC_011887:72364:9346493464944891026Methylobacterium nodulans ORS 2060 plasmid pMNOD02, completeextracellular solute-binding protein family 37e-83307
CP002185:3627992:3632001363200136330261026Escherichia coli W, complete genome5e-81301
NC_002695:4153394:4154046415404641550711026Escherichia coli O157:H7 str. Sakai, complete genomeputative periplasmic binding transport protein5e-81301
NC_014761:1321187:1331137133113713321561020Oceanithermus profundus DSM 14977 chromosome, complete genomeamino acid ABC transporter substrate-binding protein, paat family2e-77289
NC_004337:3590323:360989036098903610807918Shigella flexneri 2a str. 301, complete genomeputative periplasmic binding transport protein5e-77288
NC_007516:1618033:1646318164631816473791062Synechococcus sp. CC9605, complete genomeextracellular solute-binding protein, family 32e-74279
NC_012108:616088:618476618476619135660Desulfobacterium autotrophicum HRM2, complete genomeAapJ29e-66250
NC_013093:2230171:224854822485482249507960Actinosynnema mirum DSM 43827, complete genomeextracellular solute-binding protein family 36e-48191
NC_008312:7287000:72904027290402730068510284Trichodesmium erythraeum IMS101, complete genomeNa-Ca exchanger/integrin-beta49e-45181
NC_005773:4539751:455414345541434555096954Pseudomonas syringae pv. phaseolicola 1448A, complete genomeamino-acid binding protein, putative6e-38158
NC_020409:621792:638065638065638871807Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeABC transporter glutamine-binding protein glnH1e-24114
NC_016629:4081500:410174641017464102567822Desulfovibrio africanus str. Walvis Bay chromosome, completeABC transporter substrate-binding protein1e-21103
NC_012108:616088:619136619136619495360Desulfobacterium autotrophicum HRM2, complete genomeAapJ13e-2099.4
NC_007907:4859735:486376748637674864603837Desulfitobacterium hafniense Y51, complete genomehypothetical protein1e-1790.5
NC_020063:2785652:280459928045992805426828Enterobacteriaceae bacterium strain FGI 57, complete genomeamino acid ABC transporter substrate-binding protein, PAAT family2e-1687
NC_006177:520055:531674531674532501828Symbiobacterium thermophilum IAM 14863, complete genomeamino acid ABC transporter substrate-binding protein4e-1685.9
NC_020409:621792:629349629349630176828Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeExtracellular solute-binding protein family 34e-1685.9
NC_007907:5297477:531783553178355318665831Desulfitobacterium hafniense Y51, complete genomehypothetical protein2e-1583.6
NC_014306:4106569:410760341076034108418816Erwinia billingiae Eb661, complete genomepolar amino acid ABC transporter, periplasmic ligand binding protein6e-1582
NC_007413:4278252:427862142786214279436816Anabaena variabilis ATCC 29413, complete genomeextracellular solute-binding protein, family 31e-1480.9
NC_008027:5576458:557558955755895576461873Pseudomonas entomophila L48, complete genomeamino acid ABC transporter, periplasmic amino acid-binding protein3e-1479.3
NC_015376:2010009:203450220345022035323822Burkholderia gladioli BSR3 chromosome chromosome 2, completeextracellular solute-binding protein1e-1377.4
NC_007626:4135961:416472041647204165628909Magnetospirillum magneticum AMB-1, complete genomeABC-type amino acid transport/signal transduction systems, periplasmic component/domain5e-1375.5
NC_014910:1050706:106286210628621063722861Alicycliphilus denitrificans BC chromosome, complete genomeextracellular solute-binding protein family 39e-1374.7
NC_010612:835648:860694860694861680987Mycobacterium marinum M, complete genomeglutamine-binding lipoprotein GlnH2e-1273.6
NC_015138:272500:283696283696284613918Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completefamily 3 extracellular solute-binding protein2e-1273.2
NC_012207:477500:498462498462499448987Mycobacterium bovis BCG str. Tokyo 172, complete genomeputative glutamine-binding lipoprotein3e-1272.8
NC_000962:475816:497314497314498300987Mycobacterium tuberculosis H37Rv, complete genomePROBABLE GLUTAMINE-BINDING LIPOPROTEIN GLNH (GLNBP)3e-1272.8
NC_009525:477093:498624498624499610987Mycobacterium tuberculosis H37Ra, complete genomeamino acid ABC transporter substrate-binding protein3e-1272.8
NC_002945:476835:498333498333499319987Mycobacterium bovis AF2122/97, complete genomeglutamine-binding lipoprotein3e-1272.8
NC_009565:479500:500484500484501470987Mycobacterium tuberculosis F11, complete genomeglutamine-binding lipoprotein glnH3e-1272.8
NC_019950:481881:503702503702504688987Mycobacterium canettii CIPT 140060008 complete genomePutative glutamine-binding lipoprotein GlnH (GLNBP)3e-1272.8
NC_008769:507000:528129528129529115987Mycobacterium bovis BCG str. Pasteur 1173P2, complete genomeputative glutamine-binding lipoprotein glnH3e-1272.8
NC_015848:483500:507683507683508669987Mycobacterium canettii CIPT 140010059, complete genomeputative glutamine-binding lipoprotein GLNH (GLNBP)3e-1272.8
NC_012943:476500:497573497573498559987Mycobacterium tuberculosis KZN 1435 chromosome, complete genomeglutamine-binding lipoprotein glnH3e-1272.8
NC_016768:476500:497573497573498559987Mycobacterium tuberculosis KZN 4207 chromosome, complete genomeglutamine-binding lipoprotein glnH3e-1272.8
NC_016804:477500:498463498463499449987Mycobacterium bovis BCG str. Mexico chromosome, complete genomeputative glutamine-binding lipoprotein3e-1272.8
NC_010161:1598000:161336916133691614274906Bartonella tribocorum CIP 105476, complete genomeamino-acid ABC transporter binding protein4e-1272.4
NC_007347:1215358:122138312213831222276894Ralstonia eutropha JMP134 chromosome 1, complete sequenceextracellular solute-binding protein, family 35e-1272
NC_012108:946314:960914960914961786873Desulfobacterium autotrophicum HRM2, complete genomeGltB12e-1170.5
NC_012880:3645304:364746736474673648303837Dickeya dadantii Ech703, complete genomeextracellular solute-binding protein family 32e-1170.1
NC_009715:1202242:120549012054901206356867Campylobacter curvus 525.92 chromosome, complete genomeacriflavine resistance protein3e-1169.3
NC_017047:2957957:297671329767132977552840Rahnella aquatilis HX2 chromosome, complete genomefamily 3 extracellular solute-binding protein5e-1168.9
NC_011896:363448:385666385666386646981Mycobacterium leprae Br4923, complete genomeputative glutamine-binding protein4e-1168.9
NC_002677:363432:385649385649386629981Mycobacterium leprae TN, complete genomeputative glutamine-binding protein4e-1168.9
NC_015389:2030154:205005520500552050903849Coriobacterium glomerans PW2 chromosome, complete genomeamino acid ABC transporter substrate-binding protein, PAAT family7e-1168.6
NC_015061:2927707:294646029464602947302843Rahnella sp. Y9602 chromosome, complete genomeextracellular solute-binding protein family 31e-1067.8
NC_008783:671349:678545678545679453909Bartonella bacilliformis KC583, complete genomeglutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein2e-1067
NC_017186:361444:362994362994363938945Amycolatopsis mediterranei S699 chromosome, complete genomeABC transporter substrate-binding protein3e-1066.2
NC_021175:1291707:131353213135321314398867Streptococcus oligofermentans AS 1.3089, complete genomeputative periplasmic solute-binding transport protein7e-1065.1
NC_012912:4737703:475823547582354759071837Dickeya zeae Ech1591, complete genomeextracellular solute-binding protein family 32e-0963.9
NC_015978:1266196:128338612833861284177792Lactobacillus sanfranciscensis TMW 1.1304 chromosome, completeABC transporter glutamine-binding protein glnH2e-0963.9
NC_007948:4558000:459039545903954591306912Polaromonas sp. JS666, complete genomeextracellular solute-binding protein, family 31e-0963.9
NC_008314:1825223:184588918458891846827939Ralstonia eutropha H16 chromosome 2, complete sequenceABC-type transporter, periplasmic component: PAAT family2e-0963.5
NC_015275:1034230:105361510536151054481867Clostridium lentocellum DSM 5427 chromosome, complete genomeABC-type transporter, periplasmic subunit family 33e-0962.8
NC_010511:6756000:676616967661696767065897Methylobacterium sp. 4-46 chromosome, complete genomeextracellular solute-binding protein4e-0962.8
NC_008786:1332041:1353843135384313549641122Verminephrobacter eiseniae EF01-2, complete genomeextracellular solute-binding protein, family 35e-0962.4
NC_015602:1143038:115796011579601158775816Lactobacillus kefiranofaciens ZW3 chromosome, complete genomeglutamine ABC transporter binding protein1e-0860.8
NC_014973:3414459:341797734179773418771795Geobacter sp. M18 chromosome, complete genomefamily 3 extracellular solute-binding protein2e-0860.5
NC_009380:1606270:160797716079771608861885Salinispora tropica CNB-440 chromosome, complete genomeextracellular solute-binding protein2e-0860.5
NC_015726:406450:429482429482430420939Cupriavidus necator N-1 chromosome 1, complete sequenceglutamate/aspartate ABC transporter permease GltI2e-0860.5
NC_004557:558500:576911576911577729819Clostridium tetani E88, complete genomecystine/glutamine-binding periplasmic protein2e-0860.1
NC_008529:197272:209319209319210179861Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completeABC-type amino acid transport system, periplasmic component/domain3e-0860.1
NC_014727:889132:904535904535905395861Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,amino acid ABC transporter substrate-binding protein3e-0859.7
NC_007908:1010162:101645310164531017295843Rhodoferax ferrireducens T118, complete genomeextracellular solute-binding protein, family 34e-0859.3
NC_018528:697553:718331718331719191861Lactobacillus helveticus R0052 chromosome, complete genomeABC superfamily ATP binding cassette transporter, binding protein4e-0859.3
NC_008783:671349:6770176770176783991383Bartonella bacilliformis KC583, complete genomeputative glutamate/aspartate ABC transporter, permease protein/periplasmic glutamate/aspartate-binding protein5e-0858.9
NC_007929:1463295:150419615041961505026831Lactobacillus salivarius subsp. salivarius UCC118, complete genomeGlutamine-binding protein5e-0858.9
NC_008054:201075:217468217468218328861Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completeAmino acid ABC transporter, substrate binding protein7e-0858.5
NC_003296:1419992:144028214402821441178897Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePROBABLE SUBSTRATE-BINDING PERIPLASMIC (PBP) ABC TRANSPORTER PROTEIN6e-0858.5
NC_014844:2158318:216206621620662162935870Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomefamily 3 extracellular solute-binding protein1e-0757.8
NC_012846:1467446:149041414904141491319906Bartonella grahamii as4aup, complete genomeglutamate-aspartate ABC transporter periplasmic component GltI1e-0757.8
NC_016051:1471782:148883514888351489596762Thermococcus sp. AM4 chromosome, complete genomeglutamine ABC transporter periplasmic glutamine-binding protein1e-0757.4
NC_007512:944941:9784109784109813822973Pelodictyon luteolum DSM 273, complete genomeAmino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine2e-0757
NC_007512:1162949:1184174118417411871462973Pelodictyon luteolum DSM 273, complete genomeAmino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine2e-0757
NC_014310:1413210:143883314388331439723891Ralstonia solanacearum PSI07 megaplasmid, complete sequencesubstrate-binding periplasmic (pbp) ABC transporter protein3e-0756.6
NC_005955:947500:972281972281973192912Bartonella quintana str. Toulouse, complete genomeAmino-acid ABC transporter binding protein2e-0756.6
NC_015856:439795:448627448627449535909Collimonas fungivorans Ter331 chromosome, complete genomeglutamate aspartate periplasmic binding protein4e-0756.2
NC_015434:1671532:168773916877391688587849Verrucosispora maris AB-18-032 chromosome, complete genomeextracellular solute-binding protein family 31e-0654.7
NC_007651:1726472:174854917485491749349801Burkholderia thailandensis E264 chromosome I, complete sequenceamino acid ABC transporter, periplasmic amino acid-binding protein1e-0654.7
NC_014958:1335650:134834013483401349095756Deinococcus maricopensis DSM 21211 chromosome, complete genomeABC transporter periplasmic subunit1e-0654.7
NC_011894:957897:969653969653970456804Methylobacterium nodulans ORS 2060, complete genomeextracellular solute-binding protein family 31e-0654.3
NC_010505:5035668:504504550450455045944900Methylobacterium radiotolerans JCM 2831, complete genomeextracellular solute-binding protein family 32e-0653.5
NC_014098:2971011:297631029763102977149840Bacillus tusciae DSM 2912 chromosome, complete genomeextracellular solute-binding protein family 33e-0653.1
NC_012121:1444633:1449993144999314514681476Staphylococcus carnosus subsp. carnosus TM300, complete genomehypothetical protein3e-0653.1
NC_015138:3022414:304446530444653045361897Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completefamily 3 extracellular solute-binding protein3e-0653.1
NC_015733:3923800:392585739258573926642786Pseudomonas putida S16 chromosome, complete genomeamino acid ABC transporter periplasmic amino acid-binding protein4e-0652.8
NC_017075:4880807:488417548841754885077903Rubrivivax gelatinosus IL144, complete genomefamily 3 extracellular solute-binding protein4e-0652.8
NC_002927:2636694:265544826554482656236789Bordetella bronchiseptica RB50, complete genomeputative amino-acid ABC transporter, periplasmic amino acid-binding protein3e-0652.8
NC_016612:3087615:309957030995703100481912Klebsiella oxytoca KCTC 1686 chromosome, complete genomeglutamate and aspartate transporter subunit5e-0652.4
NC_004557:558500:577754577754578569816Clostridium tetani E88, complete genomecystine/glutamine-binding periplasmic protein7e-0652
NC_008786:3845988:384832538483253849149825Verminephrobacter eiseniae EF01-2, complete genomeextracellular solute-binding protein, family 37e-0651.6
NC_006396:320853:336442336442337230789Haloarcula marismortui ATCC 43049 chromosome I, complete sequenceglutamine ABC transporter permease protein8e-0651.6