Pre_GI Gene

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Host: NC_015275 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_015275:1034230 Clostridium lentocellum DSM 5427 chromosome, complete genome

Host Lineage: Cellulosilyticum lentocellum; Cellulosilyticum; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolation: River sediment with paper mill waste; Temp: Mesophile; Temp: 40C; Isolation:river sediment with paper mill waste; Country:United Kingdom: River Don, Scotland. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. This is a cellulolytic bacterium isolated from river sediment containing paper-mill waste.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
10342301035147918hypothetical proteinBLASTP
1035192103526574tRNA-ArgQuickGO ontology
103540810366311224integrase family proteinQuickGO ontologyBLASTP
10366341037089456helix-turn-helix domain proteinQuickGO ontologyBLASTP
10372471037450204helix-turn-helix domain proteinQuickGO ontology
10374911037658168hypothetical protein
10376551037891237hypothetical protein
10379061038694789hypothetical proteinBLASTP
10386721039493822hypothetical proteinBLASTP
10395091040324816hypothetical proteinBLASTP
10403421040743402hypothetical protein
10408421040982141hypothetical protein
10414391041894456hypothetical protein
10419111042747837hypothetical proteinBLASTP
104279910464253627phage tail tape measure protein TP901 familyQuickGO ontologyBLASTP
10464151046705291hypothetical protein
10467401046964225hypothetical protein
10469361047157222hypothetical protein
10472121048036825RNA polymerase sigma 32 subunit RpoHQuickGO ontologyBLASTP
10481541049131978hypothetical proteinBLASTP
104943110506061176hypothetical protein
10515331052192660polar amino acid ABC transporter inner membrane subunitQuickGO ontologyBLASTP
10521731052850678polar amino acid ABC transporter inner membrane subunitQuickGO ontologyBLASTP
10528631053618756Fe3-transporting ATPaseQuickGO ontologyBLASTP
10536151054481867ABC-type transporter periplasmic subunit family 3QuickGO ontologyBLASTP