Pre_GI: BLASTP Hits

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Query: NC_009567:904922:920369 Haemophilus influenzae PittGG chromosome, complete genome

Start: 920369, End: 921643, Length: 1275

Host Lineage: Haemophilus influenzae; Haemophilus; Pasteurellaceae; Pasteurellales; Proteobacteria; Bacteria

General Information: Strain PittGG is a non-typeable Haemophilus influenzae (NTHi) isolate recovered by Dr. Robert Wadowsky from the external ear discharge of a spontaneously perforated tympanic membrane of a child in Pittsburgh, USA who had been diagnosed with otorrhea. Causes respiratory tract infections primarily in children. A group of organisms that are either obligate parasites or commensal organisms found in animal mucous membranes. Almost all species require the presence of important growth factors found in the blood of their hosts, including either X factor (protoporphyrin IX or heme) or V factor (nicotinamide adenine dinucleotide (NAD or NADP)). This organism was first isolated in the 1890s during an influenza pandemic by Pfeiffer, and was originally thought to be the source of influenza, although later it was shown to be a secondary pathogen and may be synergistic with the influenza virus. This bacterium is one of the leading causes of meningitis in young children, and it may also cause septicemia, otitis media (inflammation of the middle ear), sinusitis (inflammation of the sinus cavity) and chronic bronchitis. It is highly adapted to its human host and typically lives in the nasopharynx and is a major cause of lower respiratory infections in infants and small children in developing countries (type 1b strain), although vaccine use has resulted in the decline of infections. The encapsulated organism can penetrate the blood and avoid both phagocytosis and complement-mediated lysis. All known strains produce neuraminidase and an IgA protease as well as fimbrial adhesins for attachment.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007146:1405459:1411560141156014127231164Haemophilus influenzae 86-028NP, complete genomemodification methylase Bsp6I-like5e-171600
NC_012913:1041969:1052414105241410535651152Aggregatibacter aphrophilus NJ8700, complete genomeDNA-cytosine methyltransferase1e-100367
NC_016514:2387312:2405946240594624078351890Enterobacter cloacae EcWSU1 chromosome, complete genomeBsuMI modification methylase subunit ydiP5e-77288
NC_010688:2781624:280927428092742810089816Xanthomonas campestris pv. campestris, complete genomehypothetical protein1e-59230
NC_008782:1483155:1503291150329115049101620Acidovorax sp. JS42, complete genomeC-5 cytosine-specific DNA methylase7e-58224
NC_012962:4942000:495918149591814959684504Photorhabdus asymbiotica, complete genomecytosine-specific DNA methyltransferase1e-56220
NC_013421:1780722:1793790179379017952531464Pectobacterium wasabiae WPP163, complete genomeDNA-cytosine methyltransferase3e-56219
NC_008344:49039:1106951106951121881494Nitrosomonas eutropha C91, complete genomeDNA-cytosine methyltransferase1e-55217
NC_010170:1324758:136463513646351365204570Bordetella petrii, complete genomeputative C-5 cytosine-specific DNA methylase2e-54213
NC_010170:1498253:150503715050371505642606Bordetella petrii, complete genomeputative DNA-cytosine methyltransferase7e-54211
NC_010170:1103224:110710711071071107700594Bordetella petrii, complete genomeputative DNA-cytosine methyltransferase3e-52206
NC_008752:585884:6025506025506040101461Acidovorax avenae subsp. citrulli AAC00-1, complete genomeDNA-cytosine methyltransferase6e-52205
NC_020126:2405175:2413580241358024148271248Myxococcus stipitatus DSM 14675, complete genomecytosine-specific methyltransferase1e-48194
NC_002937:1578213:1585461158546115869241464Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completetype II DNA modification methyltransferase, putative1e-40167
NC_017219:1680344:1680344168034416815491206Bifidobacterium longum subsp. infantis ATCC 15697, complete genomehypothetical protein2e-39163
NC_011593:1680215:1680554168055416817591206Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,DNA-cytosine methyltransferase2e-39163
NC_014393:4775452:4808882480888248106181737Clostridium cellulovorans 743B chromosome, complete genomeDNA-cytosine methyltransferase8e-22105
NC_011898:3303381:3324041332404133257491709Clostridium cellulolyticum H10, complete genome5e-21102
NC_019903:1745849:1771181177118117730281848Desulfitobacterium dichloroeliminans LMG P-21439 chromosome,site-specific DNA methylase7e-2099
NC_016630:434500:4494084494084504991092Filifactor alocis ATCC 35896 chromosome, complete genomeDNA (cytosine-5-)-methyltransferase1e-1997.8
NC_019903:1345585:1374350137435013764312082Desulfitobacterium dichloroeliminans LMG P-21439 chromosome,site-specific DNA methylase1e-1997.8
NC_012781:2552723:2561449256144925625341086Eubacterium rectale ATCC 33656, complete genomeDNA-cytosine methyltransferase2e-1997.1
NC_003909:386880:4094034094034115622160Bacillus cereus ATCC 10987, complete genomeDNA-cytosine methyltransferase8e-1995.1
NC_011898:3367457:3394039339403933961982160Clostridium cellulolyticum H10, complete genomeDNA-cytosine methyltransferase8e-1995.1
NC_017219:1680344:168178616817861682013228Bifidobacterium longum subsp. infantis ATCC 15697, complete genomehypothetical protein3e-1893.6
NC_011593:1680215:168199616819961682178183Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,1e-1791.3
NC_016048:797762:834228834228834899672Oscillibacter valericigenes Sjm18-20, complete genomeputative methyltransferase2e-1790.9
NC_012962:4942000:495855449585544959162609Photorhabdus asymbiotica, complete genomedna-cytosine methyltransferase2e-1687
NC_010170:1498253:151042815104281511417990Bordetella petrii, complete genomeDNA-cytosine methyltransferase2e-1584
NC_010337:2848360:2895098289509828971012004Heliobacterium modesticaldum Ice1, complete genomeDNA-cytosine methyltransferase2e-1583.6
NC_010170:1324758:1368705136870513699041200Bordetella petrii, complete genomeDNA-cytosine methyltransferase4e-1583.2
NC_010170:1103224:1111201111120111122111011Bordetella petrii, complete genomeputative DNA-cytosine methyltransferase2e-1377
NC_017191:1173989:1294823129482312963341512Bacillus amyloliquefaciens XH7 chromosome, complete genome5C-DNA methyltransferase1e-1171.6
NC_017188:1172181:1293246129324612947571512Bacillus amyloliquefaciens TA208 chromosome, complete genomeSP-beta prophage DNA (cytosine-5-)-methyltransferase1e-1171.6
NC_010612:4837346:485234648523464853221876Mycobacterium marinum M, complete genomeconserved hypothetical phage DNA methylase2e-1170.5
NC_017190:2130651:2163862216386221653731512Bacillus amyloliquefaciens LL3 chromosome, complete genomeModification methylase Rho11sI4e-1169.7
NC_013166:1841446:1852128185212818533871260Kangiella koreensis DSM 16069, complete genomeDNA-cytosine methyltransferase1e-1067.8
NC_000921:1147394:116730411673041168269966Helicobacter pylori J99, complete genomeTYPE II DNA MODIFICATION ENZYME (METHYLTRANSFERASE)6e-1065.9
NC_013205:1187812:1204962120496212060181057Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,1e-0965.1
NC_016002:2179969:219467321946732195509837Pseudogulbenkiania sp. NH8B, complete genomecytosine-specific methyltransferase9e-1065.1
NC_016002:1741109:175632217563221757158837Pseudogulbenkiania sp. NH8B, complete genomehypothetical protein9e-1065.1
NC_011883:303980:315355315355316281927Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,DNA-cytosine methyltransferase1e-0964.3
NC_008253:3941938:394996539499653950912948Escherichia coli 536, complete genomeputative type II 5-cytosoine methyltransferase2e-0964.3
NC_011837:3272752:327962132796213280529909Clostridium kluyveri NBRC 12016, complete genomehypothetical protein3e-0963.5
NC_009706:3341250:334811933481193349027909Clostridium kluyveri DSM 555 chromosome, complete genomehypothetical protein3e-0963.5
NC_013410:1152188:1159106115910611603621257Fibrobacter succinogenes subsp. succinogenes S85 chromosome,DNA-cytosine methyltransferase5e-0962.8
NC_009089:1093832:1102804110280411038771074Clostridium difficile 630, complete genomeputative DNA methylase4e-0962.8
NC_014150:2201251:224377322437732244747975Brachyspira murdochii DSM 12563 chromosome, complete genomeDNA-cytosine methyltransferase4e-0962.8
NC_006582:2944237:298014229801422981002861Bacillus clausii KSM-K16, complete genomesite-specific DNA-methyltransferase6e-0962.4
NC_016048:797762:842133842133842540408Oscillibacter valericigenes Sjm18-20, complete genomehypothetical protein7e-0962
NC_003112:844000:8488928488928501271236Neisseria meningitidis MC58, complete genomeC-5 cytosine-specific DNA methylase1e-0861.6
NC_017505:841496:8484648484648496991236Neisseria meningitidis alpha710 chromosome, complete genomeC-5 cytosine-specific DNA methylase1e-0861.6
NC_017515:1429317:1442951144295114441861236Neisseria meningitidis M04-240196 chromosome, complete genomeDNA-cytosine methyltransferase1e-0861.6
NC_017516:1439775:1453923145392314551431221Neisseria meningitidis H44/76 chromosome, complete genomeDNA-cytosine methyltransferase1e-0861.2
NC_008752:2724977:273296127329612733215255Acidovorax avenae subsp. citrulli AAC00-1, complete genome1e-0861.2
NC_012803:2195808:220973822097382210685948Micrococcus luteus NCTC 2665, complete genomeDNA-methyltransferase Dcm2e-0861.2
NC_017512:760000:7656017656017668361236Neisseria meningitidis WUE 2594, complete genomeputative type II restriction-modification system enzyme Mod3e-0860.5
NC_017517:867595:8744168744168756511236Neisseria meningitidis M01-240355 chromosome, complete genomeDNA-cytosine methyltransferase3e-0860.5
NC_013456:212150:2229192229192242021284Vibrio sp. Ex25 chromosome 1, complete genomeDNA-cytosine methyltransferase2e-0860.5
NC_017514:1396000:1408070140807014093051236Neisseria meningitidis M01-240149 chromosome, complete genomeDNA-cytosine methyltransferase4e-0859.7
NC_007622:2501562:2501562250156225027701209Staphylococcus aureus RF122, complete genomeDNA modification methylase4e-0859.7
NC_003116:988000:9947869947869960211236Neisseria meningitidis Z2491, complete genomemodification methylase5e-0859.3
NC_010120:788000:7940657940657953001236Neisseria meningitidis 053442, complete genomeDNA (cytosine-5-)-methyltransferase6e-0859.3
NC_015417:39633:453294532946285957Clostridium botulinum BKT015925 plasmid p1BKT015925, completeputative cytosine-specific DNA methylotransferase9e-0858.5
NC_012815:23000:3460034600359611362Bifidobacterium animalis subsp. lactis DSM 10140, complete genomesite-specific DNA-methyltransferase2e-0757.8
NC_012814:23000:3460034600359611362Bifidobacterium animalis subsp. lactis Bl-04, complete genomesite-specific DNA-methyltransferase2e-0757.8
NC_011835:23204:3463134631359921362Bifidobacterium animalis subsp. lactis AD011 chromosome, completemodification methylase SinI2e-0757.8
NC_017216:22454:3446734467358281362Bifidobacterium animalis subsp. lactis BLC1, complete genomeDNA-cytosine methyltransferase2e-0757.8
NC_017217:23000:3460034600359611362Bifidobacterium animalis subsp. lactis V9 chromosome, completesite-specific DNA-methyltransferase2e-0757.8
NC_000964:649781:6560766560766572451170Bacillus subtilis subsp. subtilis str. 168, complete genomehypothetical protein2e-0757.8
NC_009615:1001744:1002546100254610038291284Parabacteroides distasonis ATCC 8503 chromosome, complete genomesite-specific DNA-methyltransferase2e-0757.4
NC_017214:658821:6700686700686716091542Bifidobacterium animalis subsp. lactis BB-12 chromosome, completeDNA-cytosine methyltransferase2e-0757.4
NC_017215:22616:3444934449359901542Bifidobacterium animalis subsp. lactis CNCM I-2494 chromosome,DNA (cytosine-5-)-methyltransferase2e-0757.4
NC_014752:1530000:1543236154323615443541119Neisseria lactamica ST-640, complete genomemodification methylase2e-0757.4
NC_009455:53000:8360283602846091008Dehalococcoides sp. BAV1 chromosome, complete genomeDNA-cytosine methyltransferase2e-0757.4
NC_015703:1087809:1109268110926811103141047Runella slithyformis DSM 19594 chromosome, complete genomeDNA-cytosine methyltransferase2e-0757
NC_014624:2878457:289003628900362890824789Eubacterium limosum KIST612 chromosome, complete genomehypothetical protein4e-0756.6
NC_010382:3643288:3643730364373036449861257Lysinibacillus sphaericus C3-41, complete genomemodification methylase SPRI6e-0755.8
NC_016048:4047922:4055599405559940567531155Oscillibacter valericigenes Sjm18-20, complete genomecytosine-specific methyltransferase7e-0755.8
NC_007940:1485006:148968014896801490606927Rickettsia bellii RML369-C, complete genomeSite-specific DNA methylase7e-0755.5
NC_011883:303980:314426314426315358933Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,DNA-cytosine methyltransferase1e-0655.1
NC_014638:1139824:114938911493891150369981Bifidobacterium bifidum PRL2010 chromosome, complete genomecytosine methyl transferase Dcm1e-0654.7
NC_014759:2099623:2113790211379021150281239Marivirga tractuosa DSM 4126 chromosome, complete genomeDNA-cytosine methyltransferase2e-0654.3
NC_009883:1492425:149753514975351498032498Rickettsia bellii OSU 85-389, complete genomeSite-specific DNA methylase2e-0654.3
NC_008253:3941938:395092439509243951841918Escherichia coli 536, complete genomeputative type II 5-cytosoine methyltransferase2e-0653.9
NC_016043:1603499:1607109160710916081251017Taylorella asinigenitalis MCE3 chromosome, complete genomeDNA-cytosine methyltransferase2e-0653.9
NC_015671:3153325:3166021316602131673911371Cellvibrio gilvus ATCC 13127 chromosome, complete genomeDNA-cytosine methyltransferase3e-0653.1
NC_015172:50782:518545185452126273Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomeC-5 cytosine-specific DNA methylase4e-0653.1
NC_010379:6880:329743297433828855Clostridium botulinum B1 str. Okra plasmid pCLD, complete sequenceC-5 cytosine-specific DNA methylase7e-0652.4
NC_010418:138325:165926165926166780855Clostridium botulinum A3 str. Loch Maree plasmid pCLK, completemodification methylase7e-0652.4
NC_010572:3363830:3400479340047934015581080Streptomyces griseus subsp. griseus NBRC 13350, complete genomehypothetical protein8e-0652