Pre_GI Gene

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Host: NC_011883 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011883:303980 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,

Host Lineage: Desulfovibrio desulfuricans; Desulfovibrio; Desulfovibrionaceae; Desulfovibrionales; Proteobacteria; Bacteria

General Information: Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 was isolated from the rumen of a sheep. D. desulfuricans reduces sulfate to sulfide found in soil, freshwater, saltwater and the intestinal tract of animals. This organism grows anaerobically and utilizes a wide variety of electron acceptors, including sulfate, sulfur, nitrate, and nitrite, as well as others. The nitrate reduction pathway is not expressed while sulfate is available. Alternatively, the sulfate reduction pathway is constitutively expressed when the cells are growing with nitrate reduction. A number of toxic metals are reduced, including uranium (VI), chromium (VI) and iron (III), making this organism of interest as bioremediator. Metal corrosion, a problem that is partly the result of the collective activity of this bacterium, results in billions of dollars in losses each year to the petroleum industry. This organism is responsible for the production of poisonous hydrogen sulfide gas in marine sediments and in terrestrial environments such as drilling sites for petroleum products.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
303177303983807hypothetical protein
303980304954975hypothetical proteinBLASTP
304942305478537nucleoid DNA-binding proteinQuickGO ontologyBLASTP
305475306176702hypothetical proteinBLASTP
3061613072431083Gp5 domain proteinQuickGO ontologyBLASTP
307382307558177hypothetical protein
307666307884219hypothetical protein
3082303092761047hypothetical protein
30988330995876tRNA-LysQuickGO ontologyBLASTP
3101563119191764glutaminyl-tRNA synthetaseQuickGO ontologyBLASTP
31230331239795tRNA-SerQuickGO ontology
312579313205627putative phage integraseQuickGO ontologyBLASTP
313363313686324putative plasmid conjugal transfer proteinQuickGO ontologyBLASTP
313965314357393DNA mismatch endonuclease VsrQuickGO ontologyBLASTP
314426315358933DNA-cytosine methyltransferaseQuickGO ontologyBLASTP
315355316281927DNA-cytosine methyltransferaseQuickGO ontologyBLASTP
3162863175361251hypothetical proteinBLASTP
317570318358789Integrase catalytic regionQuickGO ontologyBLASTP
318415318681267transposase IS3IS911 family proteinQuickGO ontologyBLASTP
3200933293689276outer membrane adhesin like proteiinQuickGO ontologyBLASTP
329737330666930D-isomer specific 2-hydroxyacid dehydrogenase NAD-bindingQuickGO ontologyBLASTP