Pre_GI Gene

Some Help

Host: NC_011835 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011835:23204 Bifidobacterium animalis subsp. lactis AD011 chromosome, complete

Host Lineage: Bifidobacterium animalis; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Isolated from the fecal sample of a healthy, breast-fed infant. Normal gut bacterium. Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
2320423530327alphabeta fold family hydrolaseQuickGO ontologyBLASTP
23569260702502excinuclease ABC subunit AQuickGO ontologyBLASTP
2642927184756methyltransferaseQuickGO ontologyBLASTP
2723328147915hypothetical proteinBLASTP
2852129069549flavoproteinQuickGO ontologyBLASTP
2938629985600hypothetical proteinBLASTP
3063130945315Zn-ribbon proteinQuickGO ontologyBLASTP
3158631855270hypothetical proteinBLASTP
3199332292300pyrophosphataseQuickGO ontologyBLASTP
32704337861083hypothetical proteinBLASTP
34631359921362modification methylase SinIQuickGO ontologyBLASTP
3608737040954hypothetical proteinBLASTP
37575399232349hypothetical proteinBLASTP
3995140571621hypothetical proteinBLASTP
40513426482136Viral A-type inclusion protein repeat-containing proteinQuickGO ontologyBLASTP
42675441171443hypothetical proteinBLASTP
4429244495204hypothetical proteinBLASTP
4475944953195hypothetical proteinBLASTP
4524545505261PemI-like proteinQuickGO ontologyBLASTP
4607846968891transcriptional regulatorQuickGO ontologyBLASTP
48065503142250beta-glucosidaseQuickGO ontologyBLASTP
5155852010453hypothetical proteinBLASTP
52340536711332transposaseQuickGO ontologyBLASTP