Pre_GI Gene

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Host: NC_017217 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_017217:23000 Bifidobacterium animalis subsp. lactis V9 chromosome, complete

Host Lineage: Bifidobacterium animalis; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. Bifidobacterium animalis and Bifidobacterium lactis were originally considered to be separate species. Recent studies evaluating the DNA relatedness and phenotypic similarities of these species has determined that they represent a single species.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
23538260392502ABC transporterQuickGO ontologyBLASTP
2639827153756methyltransferaseQuickGO ontologyBLASTP
2720228116915hypothetical proteinBLASTP
2843929038600oxidoreductaseQuickGO ontologyBLASTP
2924129954714hypothetical proteinBLASTP
3067830914237hypothetical proteinBLASTP
3109631371276hypothetical proteinBLASTP
3155531824270hypothetical proteinBLASTP
3196232285324MazG nucleotide pyrophosphohydrolase domain-containing proteinQuickGO ontologyBLASTP
3231332663351hypothetical proteinBLASTP
32673337551083hypothetical proteinBLASTP
3389034099210hypothetical proteinBLASTP
34600359611362site-specific DNA-methyltransferaseQuickGO ontologyBLASTP
3605636901846hypothetical proteinBLASTP
37469398922424hypothetical proteinBLASTP
3992040501582hypothetical proteinBLASTP
40482426172136hypothetical proteinBLASTP
4295943327369hypothetical proteinBLASTP
4352643639114hypothetical proteinBLASTP
4426144464204hypothetical proteinBLASTP
4472844958231hypothetical proteinBLASTP
4502945178150hypothetical proteinBLASTP
4521445474261hypothetical proteinBLASTP
4547645859384transcriptional modulator of MazEtoxin MazFQuickGO ontologyBLASTP
4604746937891transcriptional regulatorQuickGO ontologyBLASTP
4706647329264aldoketo reductaseQuickGO ontologyBLASTP
4729247942651aldoketo reductaseQuickGO ontologyBLASTP
48034502832250putative beta-glucosidaseQuickGO ontologyBLASTP
5154251979438hypothetical proteinBLASTP
52309534421134transposase IS204IS1001IS1096IS1165 family proteinQuickGO ontologyBLASTP