Pre_GI: BLASTP Hits

Some Help

Query: NC_009092:2529518:2533507 Shewanella loihica PV-4, complete genome

Start: 2533507, End: 2534268, Length: 762

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006512:1942000:195541819554181956128711Idiomarina loihiensis L2TR, complete genomefatty acid metabolism regulator6e-85313
NC_020181:734477:748102748102748821720Enterobacter aerogenes EA1509E, complete genomeTranscriptional regulator for fatty acid degradation FadR, GntR family9e-78290
NC_015663:4735808:473739347373934738112720Enterobacter aerogenes KCTC 2190 chromosome, complete genomefatty acid metabolism regulator9e-78290
NC_013282:2582720:258593925859392586658720Cronobacter turicensis, complete genomeFatty acid metabolism regulator protein2e-76285
NC_020211:2985157:299607529960752996794720Serratia marcescens WW4, complete genomeDNA-binding transcriptional dual regulator of fatty acid metabolism6e-75280
NC_014500:2525880:254282125428212543540720Dickeya dadantii 3937 chromosome, complete genomeDNA-binding transcriptional dual regulator of fatty acid metabolism4e-73274
NC_012912:2285778:228577822857782286497720Dickeya zeae Ech1591, complete genomefatty acid metabolism transcriptional regulator FadR9e-72270
NC_013166:784339:802018802018802740723Kangiella koreensis DSM 16069, complete genomefatty acid metabolism transcriptional regulator FadR5e-66251
NC_007974:2097334:213197321319732132776804Ralstonia metallidurans CH34 chromosome 2, complete sequenceregulatory protein GntR, HTH1e-1273.6
NC_007644:1352794:135436113543611355110750Moorella thermoacetica ATCC 39073, complete genomeregulatory protein GntR, HTH1e-1170.5
NC_011740:2737467:274186427418642742535672Escherichia fergusonii ATCC 35469, complete genomeputative gntR family regulatory protein1e-0860.1
NC_015761:1488807:149410414941041494778675Salmonella bongori NCTC 12419, complete genomeregulatory protein1e-0860.1
NC_011898:1558208:156763615676361568325690Clostridium cellulolyticum H10, complete genomeGntR domain protein2e-0859.7
NC_013131:9711508:973378897337889734621834Catenulispora acidiphila DSM 44928, complete genomeregulatory protein GntR HTH3e-0858.9
NC_003063:757999:761406761406762080675Agrobacterium tumefaciens str. C58 chromosome linear, completehypothetical protein3e-0858.9
NC_003305:1297785:131267613126761313407732Agrobacterium tumefaciens str. C58 chromosome linear, completetranscriptional regulator, GntR family4e-0858.5
NC_013501:1337489:134428613442861345053768Rhodothermus marinus DSM 4252, complete genomeGntR domain protein6e-0858.2
NC_011094:1584038:158403815840381584709672Salmonella enterica subsp. enterica serovar Schwarzengrund strregulatory protein6e-0858.2
NC_016856:1621279:162656716265671627238672Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative regulatory protein6e-0858.2
NC_016860:1614280:161428016142801614951672Salmonella enterica subsp. enterica serovar Typhimurium strputative regulatory protein6e-0858.2
NC_015064:1355065:137103413710341371891858Acidobacterium sp. MP5ACTX9 chromosome, complete genomeGntR domain protein5e-0858.2
NC_003197:1611302:161647016164701617261792Salmonella typhimurium LT2, complete genomeputative regulatory protein9e-0857.4
NC_003198:1463253:147775414777541478545792Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative regulatory protein9e-0857.4
NC_009617:3647500:366042136604213661161741Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeGntR family transcriptional regulator1e-0757
NC_016582:9664000:967760596776059678303699Streptomyces bingchenggensis BCW-1 chromosome, complete genomeGntR family transcriptional regulator2e-0756.6
NC_007963:3553678:356654835665483567216669Chromohalobacter salexigens DSM 3043, complete genometranscriptional regulator, GntR family2e-0756.6
NC_012759:3648500:366540336654033666179777Escherichia coli BW2952 chromosome, complete genomeDNA-binding transcriptional repressor LldR2e-0756.2
NC_004337:3590323:375165237516523752428777Shigella flexneri 2a str. 301, complete genometranscriptional regulator2e-0756.2
NC_007519:1244198:125890712589071259602696Desulfovibrio alaskensis G20 chromosome, complete genomeGntR family transcriptional regulator4e-0755.5
NC_014323:4619344:464992446499244650634711Herbaspirillum seropedicae SmR1 chromosome, complete genometranscription regulator protein4e-0755.5
NC_014306:2518996:252033425203342521041708Erwinia billingiae Eb661, complete genomeTranscriptional regulator, GntR family3e-0755.5
NC_007606:3755155:377484737748473775623777Shigella dysenteriae Sd197, complete genometranscriptional regulator3e-0755.5
NC_011750:955451:973500973500974246747Escherichia coli IAI39 chromosome, complete genomeputative DNA-binding transcriptional regulator5e-0755.1
NC_007384:2251792:225373222537322254478747Shigella sonnei Ss046, complete genomeputative transcriptional regulator5e-0755.1
NC_002695:2854629:285556828555682856314747Escherichia coli O157:H7 str. Sakai, complete genomeputative transcriptional regulator5e-0755.1
NC_002655:2925787:292578729257872926533747Escherichia coli O157:H7 EDL933, complete genomeputative transcriptional regulator5e-0755.1
AC_000091:2185369:218536921853692186115747Escherichia coli W3110 DNA, complete genomepredicted DNA-binding transcriptional regulator5e-0755.1
CP002185:2347413:235062723506272351373747Escherichia coli W, complete genomepredicted DNA-binding transcriptional regulator5e-0755.1
NC_010473:2267851:227106522710652271811747Escherichia coli str. K-12 substr. DH10B, complete genomepredicted DNA-binding transcriptional regulator5e-0755.1
NC_017328:2225418:222844922284492229195747Shigella flexneri 2002017 chromosome, complete genomeGntR family transcriptional regulator5e-0755.1
CU928160:2239637:224157722415772242323747Escherichia coli IAI1 chromosome, complete genomeputative DNA-binding transcriptional regulator5e-0755.1
NC_010468:1694729:171221617122161712962747Escherichia coli ATCC 8739, complete genometranscriptional regulator, GntR family5e-0755.1
NC_010001:1917456:191829419182941918998705Clostridium phytofermentans ISDg, complete genomeregulatory protein GntR HTH4e-0755.1
NC_020291:5093138:511164951116495112383735Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeregulatory protein GntR, HTH5e-0755.1
NC_015687:2632557:265543326554332656128696Clostridium acetobutylicum DSM 1731 chromosome, complete genomeFadR family transcriptional regulator5e-0755.1
NC_016822:2341127:234306723430672343813747Shigella sonnei 53G, complete genomeGntR family transcriptional regulator5e-0755.1
NC_013008:2851342:285134228513422852088747Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeDNA-binding transcriptional regulator5e-0755.1
NC_012759:2069326:207254020725402073286747Escherichia coli BW2952 chromosome, complete genomeputative DNA-binding transcriptional regulator5e-0755.1
NC_011741:2239637:224157722415772242323747Escherichia coli IAI1 chromosome, complete genomeputative DNA-binding transcriptional regulator5e-0755.1
NC_011353:2852362:285236228523622853108747Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeGntR family transcriptional regulator5e-0755.1
NC_013510:39975:487834878349517735Thermomonospora curvata DSM 43183, complete genometranscriptional regulator, GntR family6e-0754.7
NC_011745:2399313:240125324012532401999747Escherichia coli ED1a chromosome, complete genomeputative DNA-binding transcriptional regulator9e-0754.3
NC_009792:642881:657290657290658036747Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein8e-0754.3
NC_014550:2562053:256446125644612565135675Arthrobacter arilaitensis Re117, complete genomeputative GntR family transcriptional regulator7e-0754.3
NC_015672:788417:811724811724812503780Flexistipes sinusarabici DSM 4947 chromosome, complete genomeregulatory protein GntR1e-0653.9
NC_014479:2505823:252667125266712527399729Bacillus subtilis subsp. spizizenii str. W23 chromosome, completeGntR family transcriptional regulator1e-0653.9
NC_006582:1297039:1310905131090513123201416Bacillus clausii KSM-K16, complete genometranscriptional regulator, GntR family1e-0653.9
NC_014121:3483976:348848334884833489229747Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein1e-0653.9
NC_015968:3053565:306949830694983070244747Enterobacter asburiae LF7a chromosome, complete genomeGntR family transcriptional regulator with UTRA sensor domain9e-0753.9
NC_008148:583030:583030583030583788759Rubrobacter xylanophilus DSM 9941, complete genomeGntR-like protein1e-0653.5
NC_016612:178864:186603186603187319717Klebsiella oxytoca KCTC 1686 chromosome, complete genomeGntR family transcriptional regulator2e-0653.1
NC_006905:2235607:226199722619972262743747Salmonella enterica subsp. enterica serovar Choleraesuis strputative regulatory protein, gntR family2e-0653.1
NC_011149:2179592:220506922050692205815747Salmonella enterica subsp. enterica serovar Agona str. SL483,transcriptional regulator, GntR family2e-0653.1
NC_003198:2179688:220506222050622205808747Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative gntR-family transcriptional regulator2e-0653.1
NC_017275:927814:944351944351944989639Sulfolobus islandicus HVE10/4 chromosome, complete genomeGntR family transcriptional regulator2e-0652.8
NC_013716:4824541:484752448475244848306783Citrobacter rodentium ICC168, complete genomeGntR-family transcriptional regulator3e-0652
NC_016935:3819500:382680038268003827531732Paenibacillus mucilaginosus 3016 chromosome, complete genometranscriptional regulator5e-0651.6
NC_015690:3269000:327636032763603277091732Paenibacillus mucilaginosus KNP414 chromosome, complete genometranscriptional regulator5e-0651.6
NC_017095:119361:147716147716148471756Fervidobacterium pennivorans DSM 9078 chromosome, complete genometranscriptional regulator6e-0651.6
NC_009664:570768:573008573008573763756Kineococcus radiotolerans SRS30216, complete genomeregulatory protein GntR HTH6e-0651.6