Pre_GI Gene

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Host: NC_010001 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010001:1917456 Clostridium phytofermentans ISDg, complete genome

Host Lineage: Lachnoclostridium phytofermentans; Lachnoclostridium; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolated from forest soil near the Quabbin Reservoir in Massachusetts, USA. This organism plays an important industrial and ecological role in the anaerobic fermentation of cellulose and produces economically significant levels of acetate and ethanol. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
19174561918169714hypothetical proteinBLASTP
19182941918998705regulatory protein GntR HTHQuickGO ontologyBLASTP
19192751920270996hypothetical proteinBLASTP
19203711921045675hydrogenase accessory protein HypBQuickGO ontologyBLASTP
1921125192380026764Fe-4S ferredoxin iron-sulfur binding domain proteinQuickGO ontologyBLASTP
19238081924149342hydrogenase expressionsynthesis HypAQuickGO ontologyBLASTP
192452919269222394ATPase P-type transporting HAD superfamily subfamily ICQuickGO ontologyBLASTP
192734419286871344hypothetical proteinBLASTP
19289461929713768protein of unknown function DUF328QuickGO ontologyBLASTP
19296941930146453alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergenQuickGO ontologyBLASTP
19303591930871513Ferritin Dps family proteinQuickGO ontologyBLASTP
193110119327801680peptidase S8 and S53 subtilisin kexin sedolisinQuickGO ontologyBLASTP
193285919345381680peptidase S8 and S53 subtilisin kexin sedolisinQuickGO ontologyBLASTP
193462819363071680peptidase S8 and S53 subtilisin kexin sedolisinQuickGO ontologyBLASTP