Pre_GI: BLASTP Hits

Some Help

Query: NC_008269:428898:433395 Rhodococcus sp. RHA1 plasmid pRHL1, complete sequence

Start: 433395, End: 434702, Length: 1308

Host Lineage: Rhodococcus jostii; Rhodococcus; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from soil contaminated with gamma-hexachlorocyclohexane (lindane: a toxic insecticide) in Japan. Polychlorinated biphenyl degrading bacterium. Rhodococcus jostii is capable of degrading a wide variety of polychlorinated biphenyls (PCBs), which are toxic compounds produced by industry, and is studied extensively for this reason. This microbe is being examined thoroughly under different environmental conditions in order to better understand metabolic pathways and gene functions.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012659:467893:4892804892804905601281Bacillus anthracis str. A0248, complete genomeacetylornithine deacetylase3e-43176
NC_003997:467993:4893804893804906601281Bacillus anthracis str. Ames, complete genomeacetylornithine deacetylase3e-43176
NC_005945:467427:4894234894234907031281Bacillus anthracis str. Sterne, complete genomeacetylornithine deacetylase3e-43176
NC_007530:467993:4893804893804906601281Bacillus anthracis str. 'Ames Ancestor', complete genomeacetylornithine deacetylase3e-43176
NC_014299:218252:2275232275232288241302Halalkalicoccus jeotgali B3 plasmid 2, complete sequenceacetylornithine deacetylase or succinyl-diaminopimelate desuccinylase2e-36153
NC_014150:2399997:2408492240849224097601269Brachyspira murdochii DSM 12563 chromosome, complete genomeacetylornithine deacetylase or succinyl- diaminopimelate desuccinylase2e-34147
NC_014299:218252:2356422356422369791338Halalkalicoccus jeotgali B3 plasmid 2, complete sequenceacetylornithine deacetylase or succinyl-diaminopimelate desuccinylase4e-33142
NC_014210:3170537:3173183317318331744661284Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase2e-30134
NC_013517:3846747:3849344384934438505971254Sebaldella termitidis ATCC 33386, complete genomeacetylornithine deacetylase or succinyl- diaminopimelate desuccinylase3e-26120
NC_009468:38112:6181861818631281311Acidiphilium cryptum JF-5 plasmid pACRY02, complete sequenceacetylornithine deacetylase4e-25116
NC_014297:1:7895789591301236Halalkalicoccus jeotgali B3 chromosome, complete genomepeptidase M201e-23111
NC_014299:218252:2305292305292318331305Halalkalicoccus jeotgali B3 plasmid 2, complete sequenceacetylornithine deacetylase or succinyl-diaminopimelate desuccinylase2e-23110
NC_012623:2004786:2018798201879820200091212Sulfolobus islandicus Y.N.15.51 chromosome, complete genomesuccinyl-diaminopimelate desuccinylase4e-23109
NC_009328:293000:3276293276293288581230Geobacillus thermodenitrificans NG80-2 chromosome, complete genomehypothetical protein9e-23108
NC_012632:538967:5511565511565523671212Sulfolobus islandicus M.16.27 chromosome, complete genomesuccinyl-diaminopimelate desuccinylase7e-23108
NC_020210:2133996:2197515219751521987711257Geobacillus sp. GHH01, complete genomeacetylornithine deacetylase2e-21103
NC_008525:108687:1219901219901231411152Pediococcus pentosaceus ATCC 25745, complete genomeAcetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase related deacylase1e-1894.7
NC_011978:699500:7183917183917195901200Thermotoga neapolitana DSM 4359, complete genomeSuccinyl-diaminopimelate desuccinylase2e-1894
NC_019791:638500:6584156584156596501236Caldisphaera lagunensis DSM 15908 chromosome, complete genomeacetylornithine deacetylase/succinyl-diaminopimelate desuccinylase2e-1894
NC_016070:719791:7271507271507283941245Thermoproteus tenax Kra 1, complete genomesuccinyl-diaminopimelate desuccinylase8e-1892
NC_010407:1114408:1134498113449811357361239Clavibacter michiganensis subsp. sepedonicus chromosome, completeputative hydrolase1e-1688.2
NC_010525:1314999:1315805131580513170041200Thermoproteus neutrophilus V24Sta, complete genomeacetylornithine deacetylase or succinyl-diaminopimelate desuccinylase2e-1584.3
NC_013741:1304000:1319234131923413204391206Archaeoglobus profundus DSM 5631, complete genomeacetylornithine deacetylase or succinyl- diaminopimelate desuccinylase2e-1583.6
NC_017353:361350:3887563887563899761221Staphylococcus lugdunensis N920143, complete genomeputative peptidase1e-1481.3
NC_010531:428000:4452004452004463511152Polynucleobacter necessarius STIR1, complete genomesuccinyl-diaminopimelate desuccinylase3e-1480.1
NC_016070:719791:7225897225897237821194Thermoproteus tenax Kra 1, complete genomesuccinyl-diaminopimelate desuccinylase4e-1479.7
NC_016830:6499234:6517382651738265185391158Pseudomonas fluorescens F113 chromosome, complete genomeprotein ArgE1e-1378.6
NC_013316:2309694:2325913232591323271001188Clostridium difficile R20291, complete genomeputative amidohydrolase1e-1378.2
NC_013315:2232339:2245359224535922465461188Clostridium difficile CD196 chromosome, complete genomepeptidase1e-1378.2
NC_014961:490551:5049035049035061351233Desulfurococcus mucosus DSM 2162 chromosome, complete genomeacetylornithine deacetylase or succinyl-diaminopimelate desuccinylase2e-1377.8
NC_017179:3540739:3555159355515935563461188Clostridium difficile BI1, complete genomepeptidase2e-1377
NC_013315:3532721:3547141354714135483281188Clostridium difficile CD196 chromosome, complete genomepeptidase2e-1377
NC_012792:310443:3134073134073146751269Variovorax paradoxus S110 chromosome 2, complete genomepeptidase M208e-1375.5
NC_012791:2832001:2861987286198728631621176Variovorax paradoxus S110 chromosome 1, complete genomesuccinyl-diaminopimelate desuccinylase8e-1375.5
NC_013850:2685835:2709863270986327110051143Klebsiella variicola At-22 chromosome, complete genomeacetylornithine deacetylase or succinyl-diaminopimelate desuccinylase1e-1275.1
NC_011653:331986:3486273486273498381212Thermosipho africanus TCF52B, complete genomeM20/DapE family protein YgeY9e-1375.1
NC_009648:1914621:1917454191745419185961143Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative acetylornithine deacetylase9e-1375.1
NC_012731:2650603:2653466265346626546081143Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeputative acetylornithine deacetylase9e-1375.1
NC_016845:2691129:2693983269398326951251143Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,putative acetylornithine deacetylase9e-1375.1
NC_009033:133800:1402961402961415341239Staphylothermus marinus F1, complete genomeacetylornithine deacetylase or succinyl-diaminopimelate desuccinylase1e-1274.7
NC_014774:239865:2408272408272419241098Candidatus Liberibacter solanacearum CLso-ZC1 chromosome, completesuccinyl-diaminopimelate desuccinylase1e-1274.7
NC_012527:288207:3034573034573045901134Deinococcus deserti VCD115 plasmid 1, complete sequenceacetylornithine deacetylase2e-1274.3
NC_011283:2684046:2705067270506727062091143Klebsiella pneumoniae 342 chromosome, complete genomepeptidase, ArgE/DapE family3e-1273.6
NC_014205:622627:6405366405366417681233Staphylothermus hellenicus DSM 12710 chromosome, complete genomeacetylornithine deacetylase or succinyl-diaminopimelate desuccinylase3e-1273.6
NC_005791:1377736:1381339138133913825861248Methanococcus maripaludis S2, complete genomesuccinyl-diaminopimelate desuccinylase5e-1272.8
NC_020164:280087:2960722960722972921221Staphylococcus warneri SG1, complete genomesuccinyl-diaminopimelate desuccinylase6e-1272.4
NC_004461:205068:2059622059622071791218Staphylococcus epidermidis ATCC 12228, complete genomehypothetical protein8e-1272
NC_014624:287500:2888932888932900411149Eubacterium limosum KIST612 chromosome, complete genomeputative succinyl-diaminopimelate desuccinylase8e-1272
NC_021182:434351:4420504420504432341185Clostridium pasteurianum BC1, complete genomeacetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase2e-1170.9
NC_008544:818730:8373698373698386281260Burkholderia cenocepacia HI2424 chromosome 3, complete sequenceacetylornithine deacetylase or succinyl-diaminopimelate desuccinylase3e-1170.1
NC_010482:1540011:1541542154154215427471206Candidatus Korarchaeum cryptofilum OPF8, complete genomepeptidase M204e-1169.7
NC_014976:759129:7698357698357710731239Bacillus subtilis BSn5 chromosome, complete genomeacetylornithine deacetylase4e-1169.7
NC_013446:2655955:2679833267983326810141182Comamonas testosteroni CNB-2, complete genomesuccinyl-diaminopimelate desuccinylase6e-1169.3
NC_018643:857911:8887898887898899671179Alpha proteobacterium HIMB5 chromosome, complete genomeacetylornithine deacetylase ArgE7e-1168.9
NC_007963:2644930:2676414267641426776221209Chromohalobacter salexigens DSM 3043, complete genomeacetylornithine deacetylase (ArgE)1e-1068.6
NC_013887:1668913:1672227167222716734561230Methanocaldococcus sp. FS406-22 chromosome, complete genomeacetylornithine deacetylase or succinyl-diaminopimelate desuccinylase1e-1068.6
NC_015847:1462068:1465672146567214669191248Methanococcus maripaludis XI chromosome, complete genomediaminopimelate aminotransferase9e-1168.6
NC_012985:465354:4804614804614816301170Candidatus Liberibacter asiaticus str. psy62, complete genomesuccinyl-diaminopimelate desuccinylase1e-1068.2
NC_009975:1163918:1179496117949611807431248Methanococcus maripaludis C6, complete genomeacetylornithine deacetylase or succinyl-diaminopimelate desuccinylase1e-1068.2
NC_007940:1485006:1513443151344315146181176Rickettsia bellii RML369-C, complete genomeSuccinyl-diaminopimelate desuccinylase1e-1068.2
NC_009883:1492425:1520347152034715215221176Rickettsia bellii OSU 85-389, complete genomeSuccinyl-diaminopimelate desuccinylase1e-1068.2
NC_009637:646092:6496956496956509421248Methanococcus maripaludis C7 chromosome, complete genomediaminopimelate aminotransferase1e-1068.2
NC_009135:130159:1457431457431469901248Methanococcus maripaludis C5, complete genomeacetylornithine deacetylase or succinyl-diaminopimelate desuccinylase1e-1067.8
NC_014328:3294086:3302619330261933038031185Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative deacetylase2e-1067.4
NC_007759:1571425:1595000159500015962531254Syntrophus aciditrophicus SB, complete genomesuccinyl-diaminopimelate desuccinylase2e-1067
NC_009051:1455183:1455183145518314563491167Methanoculleus marisnigri JR1, complete genomeacetylornithine deacetylase or succinyl-diaminopimelate desuccinylase5e-1066.2
NC_015425:405058:4090914090914104161326Clostridium botulinum BKT015925 chromosome, complete genomeputative peptidase5e-1065.9
NC_011283:1811000:1875052187505218762121161Klebsiella pneumoniae 342 chromosome, complete genomeacetylornithine deacetylase6e-1065.9
NC_013156:633475:6497946497946510231230Methanocaldococcus fervens AG86, complete genomeacetylornithine deacetylase or succinyl-diaminopimelate desuccinylase2e-0963.9
NC_009954:117895:1380351380351392761242Caldivirga maquilingensis IC-167, complete genomeacetylornithine deacetylase or succinyl-diaminopimelate desuccinylase3e-0963.2
NC_009634:759372:7629617629617642081248Methanococcus vannielii SB chromosome, complete genomediaminopimelate aminotransferase5e-0962.8
NC_013949:939695:9598689598689612051338Helicobacter mustelae 12198 chromosome, complete genomesuccinyl-diaminopimelate desuccinylase1e-0861.2
NC_013971:2617000:2618655261865526197821128Erwinia amylovora ATCC 49946 chromosome, complete genomesuccinyl-diaminopimelate desuccinylase1e-0861.2
NC_013961:2579000:2581127258112725822541128Erwinia amylovora, complete genomeN-succinyl-diaminopimelate deacylase1e-0861.2
NC_019907:46994:5016650166513561191Liberibacter crescens BT-1 chromosome, complete genomeN-succinyl-L,L-diaminopimelate desuccinylase3e-0860.1
NC_020409:560278:5602785602785614981221Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeputative enzyme7e-0858.9
NC_016751:1979201:1979201197920119805471347Marinitoga piezophila KA3 chromosome, complete genomedipeptidase8e-0858.5
NC_013169:1410384:1432724143272414340371314Kytococcus sedentarius DSM 20547, complete genomeacetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase1e-0758.2
NC_019970:2551607:2551607255160725530011395Thermoanaerobacterium thermosaccharolyticum M0795, complete genomedipeptidase, putative2e-0757.8
NC_015385:965341:9698619698619710901230Treponema succinifaciens DSM 2489 chromosome, complete genomeacetylornithine deacetylase or succinyl-diaminopimelate desuccinylase2e-0757.8
NC_013959:1428381:1428381142838114295111131Sideroxydans lithotrophicus ES-1 chromosome, complete genomesuccinyl-diaminopimelate desuccinylase2e-0757.4
NC_015518:179938:1982971982971995111215Acidianus hospitalis W1 chromosome, complete genomesuccinyl-diaminopimelate desuccinylase2e-0757.4
NC_010610:908452:9297219297219307821062Lactobacillus fermentum IFO 3956, complete genomepeptidase3e-0757
NC_015555:2259500:2279666227966622810601395Thermoanaerobacterium xylanolyticum LX-11 chromosome, completedipeptidase3e-0756.6
NC_006300:600516:6280576280576291901134Mannheimia succiniciproducens MBEL55E, complete genomesuccinyl-diaminopimelate desuccinylase3e-0756.6
NC_008043:86470:8848288482896691188Silicibacter sp. TM1040 mega plasmid, complete sequencepeptidase M204e-0756.2
NC_004545:96422:9858998589997221134Buchnera aphidicola str. Bp (Baizongia pistaciae), complete genomesuccinyl-diaminopimelate desuccinylase5e-0756.2
NC_016943:4799915:4800953480095348020411089Blastococcus saxobsidens DD2, complete genomeacetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase6e-0755.8
NC_014364:111000:1216401216401228181179Spirochaeta smaragdinae DSM 11293 chromosome, complete genomepeptidase M206e-0755.8
NC_009655:866281:8668698668698679991131Actinobacillus succinogenes 130Z chromosome, complete genomesuccinyl-diaminopimelate desuccinylase5e-0755.8
NC_016109:7445603:7461445746144574627611317Kitasatospora setae KM-6054, complete genomeputative peptidase M20 family protein9e-0755.1
NC_008700:1994829:2012345201234520134931149Shewanella amazonensis SB2B, complete genomesuccinyl-diaminopimelate desuccinylase1e-0655.1
NC_016582:10015558:1003178310031783100331201338Streptomyces bingchenggensis BCW-1 chromosome, complete genomehypothetical protein1e-0655.1
NC_015761:2444833:2465547246554724666741128Salmonella bongori NCTC 12419, complete genomesuccinyl-diaminopimelate desuccinylase1e-0655.1
NC_017955:2494640:2531004253100425323321329Modestobacter marinus, complete genomepeptidase M201e-0654.7
NC_013159:2098500:2126157212615721274611305Saccharomonospora viridis DSM 43017, complete genomeacetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase1e-0654.7
NC_016111:5515462:5525115552511555264401326Streptomyces cattleya NRRL 8057, complete genomehypothetical protein1e-0654.7
NC_007645:5397526:5403120540312054042711152Hahella chejuensis KCTC 2396, complete genomesuccinyl-diaminopimelate desuccinylase2e-0654.3
NC_015671:1540860:1540860154086015422631404Cellvibrio gilvus ATCC 13127 chromosome, complete genomepeptidase M202e-0653.9
NC_012803:1302261:1321634132163413231001467Micrococcus luteus NCTC 2665, complete genomeacetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase2e-0653.9
NC_009142:2480608:2485190248519024865451356Saccharopolyspora erythraea NRRL 2338, complete genomeArgE/DapE/Acy1/Cpg2/yscS family3e-0653.5
NC_018870:1695588:1724306172430617256371332Thermacetogenium phaeum DSM 12270 chromosome, complete genomepeptidase ArgE/DapE family3e-0653.5
NC_002516:1236644:1259291125929112604421152Pseudomonas aeruginosa PAO1, complete genomesuccinyl-diaminopimelate desuccinylase4e-0653.1
NC_008321:2190000:2205418220541822065631146Shewanella sp. MR-4, complete genomesuccinyl-diaminopimelate desuccinylase3e-0653.1
NC_009439:3394174:3393035339303533941771143Pseudomonas mendocina ymp, complete genomesuccinyl-diaminopimelate desuccinylase5e-0652.8
NC_010617:1428902:1445043144504314464551413Kocuria rhizophila DC2201, complete genomepeptidase M20A family protein7e-0652.4
NC_013174:1254874:1270234127023412715531320Jonesia denitrificans DSM 20603, complete genomepeptidase M207e-0652.4
NC_007929:473500:4961524961524975611410Lactobacillus salivarius subsp. salivarius UCC118, complete genomeXaa-His dipeptidase8e-0652