Pre_GI Gene

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Host: NC_018870 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_018870:1695588 Thermacetogenium phaeum DSM 12270 chromosome, complete genome

Host Lineage: Thermacetogenium phaeum; Thermacetogenium; Thermoanaerobacteraceae; Thermoanaerobacterales; Firmicutes; Bacteria

General Information: Nitrogen fixation. Thermophilic strictly anaerobic bacterium oxidizing acetate to CO2 in syntrophic association with a methanogenic partner. Capable of growing with various substrates such as alcohols and methylated nitrogen compounds, and to reduce sulfate in the presence of acetate. Isolated from sludge of an anaerobic digester run at 58 degrees C. Thermacetogenium phaeum is a strictly anaerobic, homoacetogenic bacterium. It is exceptional because it can use the homoacetogenic Wood-Ljungdahl (CO- dehydrogenase) pathway both for acetate formation and acetate oxidation. Acetate oxidation is possible only in syntrophic cooperation with a methanogenic partner which maintains a low hydrogen and/or formate concentration in the coculture. With this, the bacterium operates close to the thermodynamic equilibrium of substrate conversion, similar to other syntrophically fermenting bacteria such as Syntrophomonas wolfei the genomes of which have been sequenced as well in the recent past.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
169558816970541467VanW like proteinQuickGO ontologyBLASTP
16971421697411270hypothetical protein DUF1292QuickGO ontologyBLASTP
16974861697914429holliday junction resolvaseQuickGO ontologyBLASTP
16979261698876951aldoketo reductaseQuickGO ontologyBLASTP
16988771699191315hypothetical protein DUF965QuickGO ontologyBLASTP
169922717018632637alanyl-tRNA synthetase AlaSQuickGO ontologyBLASTP
170207917064044326hypothetical proteinBLASTP
17064171707238822hypothetical proteinBLASTP
170725417125425289AAA ATPaseQuickGO ontologyBLASTP
171255917141751617hypothetical proteinBLASTP
171417217186804509serinethreonine protein kinaseQuickGO ontologyBLASTP
17186901719511822phosphoadenosine phosphosulfate reductaseQuickGO ontologyBLASTP
171950117229053405hypothetical proteinBLASTP
17229081723849942hypothetical proteinBLASTP
172430617256371332peptidase ArgEDapE familyQuickGO ontologyBLASTP
172557917266221044leucyl aminopeptidase TQuickGO ontologyBLASTP
17266401726930291hypothetical proteinBLASTP
17269311727449519nitroreductaseQuickGO ontologyBLASTP
17274871728461975DD-dipeptide ABC transport system ATP-binding protein DppFQuickGO ontologyBLASTP
17284901729455966DD-dipeptide ABC transport system ATP-binding protein DppDQuickGO ontologyBLASTP
17294621730352891DD-dipeptide ABC transport system permease protein DppCQuickGO ontologyBLASTP
173036217313751014DD-dipeptide ABC transport system permease protein DdpBQuickGO ontologyBLASTP
173148517331581674DD-dipeptide ABC transport system substrate binding protein DdpAQuickGO ontologyBLASTP
173318717343171131hypothetical protein DUF917QuickGO ontologyBLASTP