Pre_GI: BLASTP Hits

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Query: NC_008268:7180663:7186481 Rhodococcus sp. RHA1, complete genome

Start: 7186481, End: 7187458, Length: 978

Host Lineage: Rhodococcus jostii; Rhodococcus; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from soil contaminated with gamma-hexachlorocyclohexane (lindane: a toxic insecticide) in Japan. Polychlorinated biphenyl degrading bacterium. Rhodococcus jostii is capable of degrading a wide variety of polychlorinated biphenyls (PCBs), which are toxic compounds produced by industry, and is studied extensively for this reason. This microbe is being examined thoroughly under different environmental conditions in order to better understand metabolic pathways and gene functions.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013757:3012130:3027282302728230282831002Geodermatophilus obscurus DSM 43160, complete genomeferredoxin2e-67256
NC_013757:2858327:2875240287524028775642325Geodermatophilus obscurus DSM 43160, complete genomeferredoxin2e-67256
NC_012522:2623172:262644726264472627400954Rhodococcus opacus B4, complete genomeoxidoreductase3e-67255
NC_017904:1725180:172518017251801726109930Mycobacterium sp. MOTT36Y chromosome, complete genomeoxidoreductase9e-66250
NC_018581:759932:789577789577790542966Gordonia sp. KTR9 chromosome, complete genomeFlavodoxin reductases (ferredoxin-NADPH reductases) family 13e-64245
NC_007953:314872:315695315695316645951Burkholderia xenovorans LB400 chromosome 3, complete sequencePutative iron-sulfur oxidoreductase, beta subunit1e-61236
NC_020302:3014483:302435030243503025300951Corynebacterium halotolerans YIM 70093 = DSM 44683, completehypothetical protein2e-60232
NC_012522:3224526:323170532317053232637933Rhodococcus opacus B4, complete genomeoxidoreductase1e-57223
NC_007650:832507:8520958520958544462352Burkholderia thailandensis E264 chromosome II, complete sequencecytochrome P4503e-54212
NC_009342:2528426:253142325314232532364942Corynebacterium glutamicum R chromosome, complete genomehypothetical protein3e-52205
NC_010801:238430:2384302384302407782349Burkholderia multivorans ATCC 17616 chromosome 3, completecytochrome P4502e-51202
NC_007974:2097334:214943221494322150397966Ralstonia metallidurans CH34 chromosome 2, complete sequenceferredoxin3e-50199
NC_020302:85821:8703287032892482217Corynebacterium halotolerans YIM 70093 = DSM 44683, completecytochrome P450 family protein3e-49196
NC_014839:12519:203192031921281963Pantoea sp. At-9b plasmid pPAT9B02, complete sequenceferredoxin3e-49196
NC_015381:1705383:170778417077841708755972Burkholderia gladioli BSR3 chromosome 1, complete sequenceOxidoreductase5e-49194
NC_010501:3448389:345377834537783454731954Pseudomonas putida W619, complete genomeferredoxin4e-48191
NC_012792:385670:408949408949409914966Variovorax paradoxus S110 chromosome 2, complete genomePhthalate 4,5-dioxygenase1e-47190
NC_014306:3006028:303941730394173040385969Erwinia billingiae Eb661, complete genomevanillate O-demethylase oxidoreductase9e-47187
NC_020209:1986503:200595520059552006908954Pseudomonas poae RE*1-1-14, complete genomeferredoxin4e-46185
NC_007802:4071006:4071006407100640742153210Jannaschia sp. CCS1, complete genomeReductive dehalogenase4e-46185
NC_013446:1648556:167632916763291677291963Comamonas testosteroni CNB-2, complete genomeferredoxin8e-46184
NC_010086:1907959:193564219356421936610969Burkholderia multivorans ATCC 17616 chromosome 2, completeferredoxin6e-46184
NC_010805:530876:538694538694539662969Burkholderia multivorans ATCC 17616 chromosome 2, completeFAD/NAD(P)-binding oxidoreductase6e-46184
NC_009255:1071868:107976710797671080735969Burkholderia vietnamiensis G4 chromosome 2, complete sequenceferredoxin6e-46184
NC_012856:2931995:295331529533152954277963Ralstonia pickettii 12D chromosome 1, complete genomeferredoxin3e-45182
NC_011740:810411:819063819063819995933Escherichia fergusonii ATCC 35469, complete genomeVanillate O-demethylase oxidoreductase (Vanillate degradation ferredoxin-like protein)7e-45181
NC_020209:1949500:197429119742911975250960Pseudomonas poae RE*1-1-14, complete genomeferredoxin2e-44179
NC_007974:2097334:211653021165302117525996Ralstonia metallidurans CH34 chromosome 2, complete sequenceferredoxin4e-44178
NC_014010:1850500:189379618937961894755960Candidatus Puniceispirillum marinum IMCC1322 chromosome, completeferredoxin2e-43176
NC_021171:1661923:168394216839421684904963Bacillus sp. 1NLA3E, complete genomevanillate O-demethylase3e-42172
NC_016514:1627664:164146416414641642417954Enterobacter cloacae EcWSU1 chromosome, complete genomevanillate O-demethylase oxidoreductase7e-42171
NC_012997:1335902:133794813379481338916969Teredinibacter turnerae T7901, complete genomeputative vanillate O-demethylase oxidoreductase1e-41170
NC_009659:997779:100930010093001010232933Janthinobacterium sp. Marseille chromosome, complete genomeferredoxin/oxidoreductase2e-41170
NC_003296:262118:278338278338279291954Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePROBABLE VANILLATE O-DEMETHYLASE (VANILLATE DEGRADATION FERREDOXIN-LIKE) OXIDOREDUCTASE PROTEIN2e-41169
NC_016642:4517478:452257045225704523514945Pseudovibrio sp. FO-BEG1 chromosome, complete genomevanillate O-demethylase oxidoreductase3e-40166
NC_013209:2384826:239389423938942394853960Acetobacter pasteurianus IFO 3283-01, complete genomevanillate O-demethylase oxidoreductase subunit4e-40165
NC_017100:2383487:239510123951012396060960Acetobacter pasteurianus IFO 3283-03, complete genomevanillate O-demethylase oxidoreductase subunit4e-40165
NC_017108:2383370:239243823924382393397960Acetobacter pasteurianus IFO 3283-12, complete genomevanillate O-demethylase oxidoreductase subunit4e-40165
NC_017111:2383388:239245623924562393415960Acetobacter pasteurianus IFO 3283-32, complete genomevanillate O-demethylase oxidoreductase subunit4e-40165
NC_017121:2383375:239244323924432393402960Acetobacter pasteurianus IFO 3283-07, complete genomevanillate O-demethylase oxidoreductase subunit4e-40165
NC_017125:2383467:239508123950812396040960Acetobacter pasteurianus IFO 3283-22, complete genomevanillate O-demethylase oxidoreductase subunit4e-40165
NC_017146:2383509:239512323951232396082960Acetobacter pasteurianus IFO 3283-26, complete genomevanillate O-demethylase oxidoreductase subunit4e-40165
NC_017150:2290681:230164023016402302599960Acetobacter pasteurianus IFO 3283-01-42C, complete genomevanillate O-demethylase oxidoreductase subunit4e-40165
NC_015968:1618862:163413416341341635099966Enterobacter asburiae LF7a chromosome, complete genomeferredoxin4e-40165
NC_017986:331610:372319372319373287969Pseudomonas putida ND6 chromosome, complete genomeferredoxin2e-39163
NC_010170:1580832:159031115903111591288978Bordetella petrii, complete genomeVanillate O-demethylase oxidoreductase1e-39163
NC_007951:3655088:367691336769133677890978Burkholderia xenovorans LB400 chromosome 1, complete sequenceVanillate O-demethylase reductase subunit, VanB1e-39163
NC_007952:3283394:330230733023073303254948Burkholderia xenovorans LB400 chromosome 2, complete sequenceputative vanillate O-demethylase oxidoreductase1e-39163
NC_008043:615049:6183026183026215143213Silicibacter sp. TM1040 mega plasmid, complete sequenceReductive dehalogenase2e-38159
NC_014640:3808639:381137438113743812318945Achromobacter xylosoxidans A8 chromosome, complete genomephenoxybenzoate dioxygenase subunit beta 29e-36150
NC_008786:1507139:153306315330631534040978Verminephrobacter eiseniae EF01-2, complete genomeoxidoreductase FAD/NAD(P)-binding domain protein3e-34145
NC_004088:1851500:187092118709211871886966Yersinia pestis KIM, complete genomediogenase beta subunit6e-32138
NC_005810:2549680:256626825662682567233966Yersinia pestis biovar Microtus str. 91001, complete genomeputative dioxygenase beta subunit6e-32138
NC_009381:2138625:215242121524212153386966Yersinia pestis Pestoides F chromosome, complete genomedioxygenase beta subunit6e-32138
NC_017168:2941938:296125729612572962222966Yersinia pestis A1122 chromosome, complete genomeputative dioxygenase subunit beta6e-32138
NC_017265:1571305:159200115920011592966966Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,putative dioxygenase subunit beta6e-32138
NC_010465:1790739:179195917919591792924966Yersinia pseudotuberculosis YPIII, complete genomeferredoxin6e-32138
NC_010634:2894631:291118029111802912145966Yersinia pseudotuberculosis PB1/+, complete genomeferredoxin6e-32138
NC_006155:2979500:299324829932482994213966Yersinia pseudotuberculosis IP 32953, complete genomeputative dioxygenase beta subunit6e-32138
NC_009708:1735903:175894417589441759909966Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeoxidoreductase1e-31137
NC_017160:2787637:280841928084192809369951Yersinia pestis D182038 chromosome, complete genomeoxidoreductase FAD/NAD binding/2Fe-2S iron-sulfur cluster binding domain-containing protein1e-31137
NC_015942:2316354:234477523447752345707933Acidithiobacillus ferrivorans SS3 chromosome, complete genomeferredoxin1e-30134
NC_008786:1507139:1529423152942315304661044Verminephrobacter eiseniae EF01-2, complete genomeoxidoreductase FAD/NAD(P)-binding domain protein7e-27121
NC_008343:2050000:205961220596122060361750Granulibacter bethesdensis CGDNIH1, complete genomeflavodoxin reductase family3e-25116
NC_016906:1565868:157999615799961580943948Gordonia polyisoprenivorans VH2 chromosome, complete genomeputative vanillate O-demethylase oxygenase subunit B9e-24110
NC_013446:2062862:207993620799362080631696Comamonas testosteroni CNB-2, complete genomeferredoxin2e-23110
NC_020302:146807:1585171585171595241008Corynebacterium halotolerans YIM 70093 = DSM 44683, completevanillate monooxygenase5e-22105
NC_013892:114884:1260031260031270881086Xenorhabdus bovienii SS-2004 chromosome, complete genomephenylacetic acid degradation protein with NADP-linked, 2Fe-2S ferredoxin-like and riboflavin synthase-like domains7e-1788.2
NC_015733:2581324:2591522259152225926491128Pseudomonas putida S16 chromosome, complete genomeiron-sulfur cluster-binding protein6e-1685.1
NC_006510:1731939:1763762176376217649971236Geobacillus kaustophilus HTA426, complete genomeflavohemoglobin2e-1583.2
NC_010681:1234500:1244919124491912470212103Burkholderia phytofirmans PsJN chromosome 1, complete sequenceoxidoreductase FAD/NAD(P)-binding domain protein4e-1582.4
NC_015638:1824794:1828210182821018292831074Lacinutrix sp. 5H-3-7-4 chromosome, complete genomeNitric oxide dioxygenase3e-1479.7
NC_014310:607896:6370226370226381131092Ralstonia solanacearum PSI07 megaplasmid, complete sequencephenylacetic acid degradation protein5e-1479
NC_016114:3711000:3723962372396237250231062Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeOxidoreductase FAD-binding domain-containing protein1e-1377.8
NC_014228:4408500:4413590441359044147081119Xenorhabdus nematophila ATCC 19061, complete genomeputative phenylacetic acid degradation protein with NADP-linked, 2Fe-2S ferredoxin-like and riboflavin synthase-like domains2e-1376.6
NC_011894:6516856:6529650652965065314101761Methylobacterium nodulans ORS 2060, complete genomeMOSC domain containing protein2e-1376.6
NC_015312:4658548:4658548465854846602511704Pseudonocardia dioxanivorans CB1190 chromosome, complete genomenitric oxide dioxygenase7e-1375.1
NC_010505:4990472:4990472499047249925352064Methylobacterium radiotolerans JCM 2831, complete genomepyridoxamine 5'-phosphate oxidase-related FMN-binding6e-1375.1
NC_011740:621408:6315916315916327811191Escherichia fergusonii ATCC 35469, complete genomefused nitric oxide dioxygenase ; dihydropteridine reductase 21e-1274.3
NC_007492:6372900:6375166637516663771962031Pseudomonas fluorescens PfO-1, complete genomePyridoxamine 5'-phosphate oxidase-like, FMN-binding2e-1273.6
NC_016147:586433:5988755988756008331959Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeoxidoreductase, FAD-binding protein2e-1273.2
NC_007912:4364215:4371101437110143731252025Saccharophagus degradans 2-40, complete genomeoxidoreductase, FAD-binding3e-1273.2
NC_009434:3611738:3644169364416936463612193Pseudomonas stutzeri A1501, complete genomeoxidoreductase, FAD-binding5e-1272
NC_016943:1560000:1569167156916715703481182Blastococcus saxobsidens DD2, complete genomeputative flavodoxin reductase1e-1171.2
NC_012791:721813:7235557235557255612007Variovorax paradoxus S110 chromosome 1, complete genomeoxidoreductase FAD/NAD(P)-binding domain protein9e-1271.2
NC_018681:2447871:2447871244787124512213351Nocardia brasiliensis ATCC 700358 chromosome, complete genomemolybdopterin dinucleotide-binding region2e-1170.5
NC_011004:1136895:1150461115046111525692109Rhodopseudomonas palustris TIE-1, complete genomeOxidoreductase FAD-binding domain protein2e-1170.1
NC_010501:1286971:1308626130862613106562031Pseudomonas putida W619, complete genomepyridoxamine 5'-phosphate oxidase-related FMN-binding2e-1170.1
NC_016027:123853:1387241387241399441221Gluconacetobacter xylinus NBRC 3288, complete genomeflavohemoprotein3e-1169.7
NC_013947:1296877:1313733131373313148331101Stackebrandtia nassauensis DSM 44728 chromosome, complete genomephenylacetate-CoA oxygenase/reductase PaaK subunit6e-1168.6
NC_015634:959396:9848139848139859311119Bacillus coagulans 2-6 chromosome, complete genomeOxidoreductase FAD-binding domain-containing protein2e-1067
NC_016510:1874942:1897246189724618983011056Flavobacterium columnare ATCC 49512 chromosome, complete genomephenylacetic acid degradation NADH oxidoreductase PaaE3e-1066.2
NC_013446:1648556:167066516706651670967303Comamonas testosteroni CNB-2, complete genomehypothetical protein2e-0963.5
NC_015183:2483653:2490745249074524918541110Agrobacterium sp. H13-3 chromosome, complete genomeflavohemoprotein9e-0961.2
NC_010674:658596:6611006611006622541155Clostridium botulinum B str. Eklund 17B, complete genomeputative oxidoreductase9e-0961.2
NC_010723:622928:6263066263066274601155Clostridium botulinum E3 str. Alaska E43, complete genomeputative oxidoreductase1e-0860.8
NC_009921:3473854:3499216349921635002411026Frankia sp. EAN1pec, complete genomeOxidoreductase FAD-binding domain protein2e-0860.5
NC_014915:1080793:108002310800231080796774Geobacillus sp. Y412MC52 chromosome, complete genomeoxidoreductase FAD/NAD(P)-binding domain protein3e-0859.7
NC_009725:2784334:2796779279677927979691191Bacillus amyloliquefaciens FZB42, complete genomeHmp3e-0859.3
NC_010513:44886:4983249832510251194Xylella fastidiosa M12 chromosome, complete genomenitric oxide dioxygenase4e-0859.3
NC_002488:45219:5055150551517441194Xylella fastidiosa 9a5c, complete genomeflavohemoprotein5e-0858.9
NC_020302:3014483:3044832304483230459891158Corynebacterium halotolerans YIM 70093 = DSM 44683, completephenylacetic acid degradation NADH oxidoreductase7e-0858.5
NC_014410:1527405:154127815412781542009732Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,oxidoreductase FAD/NAD(P)-binding domain protein7e-0858.2
NC_003212:1958500:196322919632291963993765Listeria innocua Clip11262, complete genomepyrDII1e-0757.8
NC_017343:224777:2455252455252466701146Staphylococcus aureus subsp. aureus ECT-R 2, complete genomeflavohemo(Hemoglobin-like protein) (Flavohemoglobin) (Nitricoxide dioxygenase) (NO oxygenase) (NOD)1e-0757.4
NC_003888:7866148:7884751788475178859621212Streptomyces coelicolor A3(2), complete genomeflavohemoprotein1e-0757.4
NC_013768:1983711:199400919940091994773765Listeria monocytogenes 08-5923, complete genomehypothetical protein3e-0756.6
NC_011660:724711:734631734631735395765Listeria monocytogenes HCC23 chromosome, complete genomedihydroorotate dehydrogenase electron transfer subunit3e-0756.2
NC_014210:3817948:3830952383095238322741323Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,Oxidoreductase FAD-binding domain protein4e-0755.8
NC_015379:2505233:2514184251418425152241041Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative oxidoreductase4e-0755.8
NC_019970:1457794:147668814766881477419732Thermoanaerobacterium thermosaccharolyticum M0795, complete genome2-polyprenylphenol hydroxylase-like oxidoreductase5e-0755.5
NC_012724:3222415:3239330323933032403611032Burkholderia glumae BGR1 chromosome 1, complete genomeOxidoreductase FAD/NAD(P)-binding domain protein5e-0755.5
NC_015516:1222632:123197212319721232754783Melissococcus plutonius ATCC 35311, complete genomedihydroorotate dehydrogenase electron transfersubunit6e-0755.5
NC_003210:1904152:190882719088271909591765Listeria monocytogenes EGD-e, complete genomehypothetical protein9e-0754.7
NC_002973:1877905:188820218882021888951750Listeria monocytogenes str. 4b F2365, complete genomedihydroorotate dehydrogenase, electron transfer subunit9e-0754.7
NC_007777:2964500:2975539297553929765911053Frankia sp. CcI3, complete genomeOxidoreductase FAD-binding region2e-0653.9
NC_013791:1323903:1323903132390313251261224Bacillus pseudofirmus OF4 chromosome, complete genomenitric oxide dioxygenase1e-0653.9
NC_011758:326366:3584523584523595611110Methylobacterium chloromethanicum CM4 plasmid pMCHL01, completeoxidoreductase FAD/NAD(P)-binding domain protein2e-0653.5
NC_015576:4070195:4087180408718040882681089Mycobacterium sp. JDM601 chromosome, complete genomeflavodoxin reductase Hmp2e-0653.5
NC_014209:1363151:138052713805271381258732Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,oxidoreductase FAD/NAD(P)-binding domain protein3e-0652.8
NC_010321:1361748:137878013787801379508729Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completeoxidoreductase FAD/NAD(P)-binding subunit6e-0652
NC_014964:1353939:137097013709701371698729Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completedihydroorotate dehydrogenase electron transfer subunit6e-0652
NC_009464:2881771:289523728952372896013777Uncultured methanogenic archaeon RC-I, complete genomepredicted dihydroorotate dehydrogenase, electron transfer subunit1e-0551.2