Pre_GI Gene

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Host: NC_011004 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011004:1136895 Rhodopseudomonas palustris TIE-1, complete genome

Host Lineage: Rhodopseudomonas palustris; Rhodopseudomonas; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This strain was isolated from an iron-rich microbial mat from School Street Marsh in Woods Hole, MA, USA. It grows photoautotrophically with Fe(II), H2, or thiosulfate as the electron donor, photoheterotrophically with a variety of organic carbon sources and chemoheterotrophically in the dark. This organism has a diverse metabolism and is capable of growth using light, inorganic, or organic compounds as energy sources and carbon dioxide or organic compounds as carbon sources. Commonly found in soil and water environments this bacterium is also capable of degrading a wide range of toxic organic compounds, and may be of use in bioremediation of polluted sites. The bacterium undergoes differentiation to produce a stalked nonmotile cell and a motile flagellated cell. In the presence of light, this bacterium produces a number of intracellular membranous vesicles to house the photosynthetic reaction centers.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
113689511391622268heavy metal translocating P-type ATPaseQuickGO ontologyBLASTP
11391841139429246hypothetical protein
11397041140531828transposase IS4 family proteinQuickGO ontologyBLASTP
11424701143300831hypothetical proteinBLASTP
114352711448911365beta-lactamase domain proteinQuickGO ontologyBLASTP
11449511145205255putative exported protein of unknown functionQuickGO ontologyBLASTP
11455351145864330putative exported protein of unknown functionQuickGO ontology
11473841147797414protein of unknown function DUF1622QuickGO ontologyBLASTP
114778211495661785hypothetical proteinBLASTP
11497391150434696protein of unknown function DUF1520QuickGO ontologyBLASTP
115046111525692109Oxidoreductase FAD-binding domain proteinQuickGO ontologyBLASTP
11525711153266696hypothetical proteinBLASTP
11532631154039777hypothetical proteinBLASTP
11552931155670378hypothetical protein
11559101156200291hypothetical protein
115620411576551452outer membrane efflux proteinQuickGO ontologyBLASTP
115766811590501383multicopper oxidase type 3QuickGO ontologyBLASTP
11590471159544498blue type 1 copper domain proteinQuickGO ontologyBLASTP
11595741159879306hypothetical proteinBLASTP
11599541160619666RNA polymerase sigma-24 subunit ECF subfamilyQuickGO ontologyBLASTP
116084911618771029transposase IS116IS110IS902 family proteinQuickGO ontologyBLASTP