Pre_GI: BLASTP Hits

Some Help

Query: NC_008268:3335035:3345193 Rhodococcus sp. RHA1, complete genome

Start: 3345193, End: 3346476, Length: 1284

Host Lineage: Rhodococcus jostii; Rhodococcus; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from soil contaminated with gamma-hexachlorocyclohexane (lindane: a toxic insecticide) in Japan. Polychlorinated biphenyl degrading bacterium. Rhodococcus jostii is capable of degrading a wide variety of polychlorinated biphenyls (PCBs), which are toxic compounds produced by industry, and is studied extensively for this reason. This microbe is being examined thoroughly under different environmental conditions in order to better understand metabolic pathways and gene functions.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008313:2685531:2704864270486427060751212Ralstonia eutropha H16 chromosome 1, complete sequencehypothetical protein5e-95348
NC_009999:38832:5284552845540351191Shewanella baltica OS195 plasmid pS19502, complete sequenceprotein of unknown function DUF2623e-54212
NC_016948:1696000:1703149170314917044471299Mycobacterium intracellulare MOTT-64 chromosome, complete genomehypothetical protein2e-47190
NC_017904:1683471:1690574169057416918091236Mycobacterium sp. MOTT36Y chromosome, complete genomehypothetical protein2e-47190
NC_011601:2139188:2169716216971621708311116Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomehypothetical protein5e-29129
NC_011205:2938356:2945199294519929463591161Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein9e-29128
NC_016026:1224129:1230514123051412316081095Micavibrio aeruginosavorus ARL-13 chromosome, complete genomehypothetical protein2e-28127
NC_014375:1242750:1252691125269112537491059Brevundimonas subvibrioides ATCC 15264 chromosome, complete genomeprotein of unknown function DUF2623e-27123
NC_017082:5925357:5933065593306559344081344Bradyrhizobium sp. S23321, complete genomehypothetical protein1e-25117
NC_016514:2334870:2339817233981723409561140Enterobacter cloacae EcWSU1 chromosome, complete genomehypothetical protein5e-24112
NC_007498:919697:9403229403229413861065Pelobacter carbinolicus DSM 2380, complete genomehypothetical protein3e-23110
NC_019673:1275627:128610112861011287054954Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein3e-23110
NC_015593:2103815:2129145212914521302181074Sphingobium chlorophenolicum L-1 chromosome chromosome 1, completehypothetical protein3e-23110
NC_014394:1658357:1676212167621216773271116Gallionella capsiferriformans ES-2 chromosome, complete genomehypothetical protein7e-23108
NC_014034:1394898:1404310140431014054971188Rhodobacter capsulatus SB1003 chromosome, complete genomehypothetical protein3e-22106
NC_010842:2615808:2625221262522126263661146Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)' chromosomehypothetical protein5e-22105
NC_009454:136468:1482581482581493611104Pelotomaculum thermopropionicum SI, complete genomehypothetical protein9e-22105
NC_016585:417979:4282044282044292861083Azospirillum lipoferum 4B plasmid AZO_p1, complete sequencehypothetical protein3e-21103
NC_016902:2580774:2592750259275025938771128Escherichia coli KO11FL chromosome, complete genomehypothetical protein4e-21103
CP002185:1493280:1511973151197315131001128Escherichia coli W, complete genomeconserved hypothetical protein4e-21103
CP002516:2580774:2592750259275025938771128Escherichia coli KO11, complete genomeprotein of unknown function DUF2624e-21103
NC_014655:1098428:1103599110359911047651167Leadbetterella byssophila DSM 17132 chromosome, complete genomehypothetical protein5e-21102
NC_008536:2079052:2087373208737320885811209Solibacter usitatus Ellin6076, complete genomehypothetical protein1e-20101
NC_007912:335500:3438703438703450631194Saccharophagus degradans 2-40, complete genomehypothetical protein2e-20100
NC_011830:720756:7239537239537250771125Desulfitobacterium hafniense DCB-2, complete genomeprotein of unknown function DUF2622e-20100
NC_013730:4118355:4124749412474941258551107Spirosoma linguale DSM 74, complete genomeprotein of unknown function DUF2621e-1998.2
CU928160:4570498:4594262459426245961781917Escherichia coli IAI1 chromosome, complete genomeconserved hypothetical protein1e-1998.2
NC_011741:4570498:4594262459426245961781917Escherichia coli IAI1 chromosome, complete genomehypothetical protein1e-1998.2
NC_011726:3051408:3050272305027230514111140Cyanothece sp. PCC 8801, complete genomeprotein of unknown function DUF2621e-1997.8
NC_008312:7169309:7191009719100971921181110Trichodesmium erythraeum IMS101, complete genomehypothetical protein1e-1997.8
NC_020410:3715210:3736925373692537380971173Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completehypothetical protein4e-1996.3
NC_007777:2543475:2553665255366525549331269Frankia sp. CcI3, complete genomeprotein of unknown function DUF2625e-1995.9
NC_013456:212150:2212822212822229011620Vibrio sp. Ex25 chromosome 1, complete genomehypothetical protein2e-1894.4
NC_010501:734363:7509297509297520321104Pseudomonas putida W619, complete genomeprotein of unknown function DUF2627e-1892
NC_010465:62348:7314473144742591116Yersinia pseudotuberculosis YPIII, complete genomeprotein of unknown function DUF2621e-1791.7
NC_008740:1635137:1645108164510816462351128Marinobacter aquaeolei VT8, complete genomehypothetical protein2e-1790.5
NC_013730:58840:6868468684697091026Spirosoma linguale DSM 74, complete genomeprotein of unknown function DUF2622e-1790.5
NC_015711:6522808:6549075654907565501841110Myxococcus fulvus HW-1 chromosome, complete genomehypothetical protein3e-1789.7
NC_014836:2581939:2590293259029325913421050Desulfurispirillum indicum S5 chromosome, complete genomehypothetical protein1e-1687.8
NC_012669:1700626:1717715171771517188481134Beutenbergia cavernae DSM 12333, complete genomeprotein of unknown function DUF2622e-1687
NC_015942:355944:3685993685993696901092Acidithiobacillus ferrivorans SS3 chromosome, complete genomehypothetical protein3e-1686.7
NC_014306:642152:6520016520016530861086Erwinia billingiae Eb661, complete genomeconserved uncharacterized protein6e-1685.5
NC_012521:1:6517651778331317Rhodococcus opacus B4 plasmid pROB02, complete sequencehypothetical protein8e-1685.1
NC_011283:3379181:3408365340836534094351071Klebsiella pneumoniae 342 chromosome, complete genomehypothetical protein1e-1584.7
NC_010338:426388:4363164363164374431128Caulobacter sp. K31, complete genomeprotein of unknown function DUF2621e-1584.3
NC_010338:650054:6631186631186642451128Caulobacter sp. K31, complete genomeprotein of unknown function DUF2621e-1584.3
NC_014376:4369666:4377130437713043781971068Clostridium saccharolyticum WM1 chromosome, complete genomeprotein of unknown function DUF2623e-1583.6
NC_012968:507988:5151275151275171241998Methylotenera mobilis JLW8, complete genomeprotein of unknown function DUF2629e-1581.6
NC_015388:1020747:1049219104921910504031185Desulfobacca acetoxidans DSM 11109 chromosome, complete genomeprotein of unknown function DUF2622e-1480.5
NC_003919:5023500:503478150347815035413633Xanthomonas axonopodis pv. citri str. 306, complete genomehypothetical protein2e-1480.5
NC_015379:6226661:6245959624595962470891131Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Hypothetical protein3e-1480.1
NC_014830:13179:4437744377454471071Intrasporangium calvum DSM 43043 chromosome, complete genomeprotein of unknown function DUF2623e-1480.1
NC_008027:5533311:5542120554212055431391020Pseudomonas entomophila L48, complete genomehypothetical protein5e-1479.3
NC_016446:979884:9886609886609905401881Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, completehypothetical protein2e-1377.8
NC_002506:207097:2158492158492177651917Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, completehypothetical protein2e-1377.8
NC_009456:998935:1008329100832910102451917Vibrio cholerae O395 chromosome 1, complete sequencehypothetical protein2e-1377.8
NC_012580:207025:2157772157772176931917Vibrio cholerae M66-2 chromosome II, complete sequencehypothetical protein2e-1377.8
NC_012583:242760:2507242507242526401917Vibrio cholerae O395 chromosome chromosome II, complete sequencehypothetical protein2e-1377.8
NC_012667:46432:5582655826577421917Vibrio cholerae MJ-1236 chromosome 2, complete genomehypothetical protein2e-1377.8
NC_016945:207089:2158292158292177451917Vibrio cholerae IEC224 chromosome II, complete sequencehypothetical protein2e-1377.8
NC_008340:2034810:2051890205189020530171128Alkalilimnicola ehrlichei MLHE-1, complete genomehypothetical protein2e-1377.4
NC_014323:992978:1002956100295610040711116Herbaspirillum seropedicae SmR1 chromosome, complete genomehypothetical protein2e-1377
NC_009792:3245368:3253959325395932551431185Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein3e-1376.6
NC_016609:1305570:1317889131788913204712583Niastella koreensis GR20-10 chromosome, complete genomehypothetical protein3e-1273.2
NC_014931:3642779:3651366365136636524151050Variovorax paradoxus EPS chromosome, complete genomeprotein of unknown function DUF2625e-1272.8
NC_014366:2427968:2437732243773224387871056Gamma proteobacterium HdN1, complete genomehypothetical protein2e-1170.5
NC_008570:236500:2456112456112468131203Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomehypothetical protein4e-1169.3
NC_009921:6691089:6699468669946867006401173Frankia sp. EAN1pec, complete genomeprotein of unknown function DUF2625e-1169.3
NC_014549:14000:2363923639247091071Arthrobacter arilaitensis Re117 plasmid pRE117-1, completehypothetical protein1e-1068.2
NC_014831:2258398:2274547227454722763551809Thermaerobacter marianensis DSM 12885 chromosome, complete genomeprotein of unknown function DUF2622e-1067.4
NC_014012:2411096:2420684242068424218771194Shewanella violacea DSS12, complete genomehypothetical protein3e-1066.6
NC_011146:3426500:3437246343724634384241179Geobacter bemidjiensis Bem, complete genomeprotein of unknown function DUF2621e-0965.1
NC_019842:3852062:3861405386140538631831779Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,hypothetical protein1e-0964.7
NC_012815:1682872:1692196169219616933141119Bifidobacterium animalis subsp. lactis DSM 10140, complete genomehypothetical protein2e-0964.3
NC_012814:1682500:1692479169247916935971119Bifidobacterium animalis subsp. lactis Bl-04, complete genomehypothetical protein2e-0964.3
NC_011835:813345:8232488232488243661119Bifidobacterium animalis subsp. lactis AD011 chromosome, completeHNH endonuclease2e-0964.3
NC_017214:379728:3896333896333907511119Bifidobacterium animalis subsp. lactis BB-12 chromosome, completehypothetical protein2e-0964.3
NC_017215:1687161:1697066169706616981841119Bifidobacterium animalis subsp. lactis CNCM I-2494 chromosome,hypothetical protein2e-0964.3
NC_017216:1682219:1692124169212416932421119Bifidobacterium animalis subsp. lactis BLC1, complete genomeHNH endonuclease domain protein2e-0964.3
NC_017217:1688441:1697765169776516988831119Bifidobacterium animalis subsp. lactis V9 chromosome, completehypothetical protein2e-0964.3
NC_010172:798923:811179811179812141963Methylobacterium extorquens PA1, complete genomeprotein of unknown function DUF2621e-0758.2
NC_010831:1224000:1247544124754412486261083Chlorobium phaeobacteroides BS1, complete genomeHNH endonuclease2e-0757.4
NC_013967:2103968:2115430211543021168181389Haloferax volcanii DS2 chromosome, complete genomeDUF262 family protein5e-0756.2
NC_014211:439611:4463004463004473611062Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 plasmidprotein of unknown function DUF2628e-0755.5
NC_013406:7024149:7055362705536270565641203Paenibacillus sp. Y412MC10 chromosome, complete genomehypothetical protein2e-0654.3