Pre_GI Gene

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Host: NC_017215 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_017215:1687161 Bifidobacterium animalis subsp. lactis CNCM I-2494 chromosome,

Host Lineage: Bifidobacterium animalis; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. Bifidobacterium animalis and Bifidobacterium lactis were originally considered to be separate species. Recent studies evaluating the DNA relatedness and phenotypic similarities of these species has determined that they represent a single species.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
16871611687688528H-transporting two-sector ATPaseQuickGO ontologyBLASTP
16877421687993252H-transporting two-sector ATPaseQuickGO ontologyBLASTP
16880241688836813H-transporting two-sector ATPaseQuickGO ontologyBLASTP
168912816902671140Homoserine O-succinyltransferaseQuickGO ontologyBLASTP
169027716917071431Multidrug resistance protein BQuickGO ontologyBLASTP
16918211692762942Purine nucleosidaseQuickGO ontologyBLASTP
169319816943431146hypothetical proteinBLASTP
16944311694637207hypothetical proteinBLASTP
16946721695163492membrane associated proteinQuickGO ontologyBLASTP
16951601695921762Cell division protein ftsK-like proteinQuickGO ontologyBLASTP
16959181696835918Replication proteinQuickGO ontologyBLASTP
16968191697046228hypothetical proteinBLASTP
169706616981841119hypothetical proteinBLASTP
169818416992961113adenine-specific DNA-methyltransferaseQuickGO ontologyBLASTP
169935317005731221DNA integrationrecombinationinversion proteinQuickGO ontologyBLASTP
170117717025081332formyl-CoA transferaseQuickGO ontologyBLASTP
170271317038701158mannan endo-14-beta-mannosidaseQuickGO ontologyBLASTP
17038441704080237hypothetical proteinBLASTP
17045741704705132hypothetical proteinBLASTP
170471617059451230hypothetical proteinBLASTP
170592117077231803Oxalyl-CoA decarboxylaseQuickGO ontologyBLASTP
170789617096291734Chloride channel proteinQuickGO ontologyBLASTP
170975217151875436Collagen adhesion proteinQuickGO ontologyBLASTP
171510217171982097hypothetical proteinBLASTP
171717817197212544GlycosidaseQuickGO ontologyBLASTP