Pre_GI Gene

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Host: NC_017216 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_017216:1682219 Bifidobacterium animalis subsp. lactis BLC1, complete genome

Host Lineage: Bifidobacterium animalis; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. Bifidobacterium animalis and Bifidobacterium lactis were originally considered to be separate species. Recent studies evaluating the DNA relatedness and phenotypic similarities of these species has determined that they represent a single species.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
16822191682746528F0F1 ATP synthase subunit BQuickGO ontologyBLASTP
16828001683030231F0F1 ATP synthase subunit CQuickGO ontologyBLASTP
16830821683894813F0F1 ATP synthase subunit AQuickGO ontologyBLASTP
168418616852141029homoserine O-succinyltransferaseQuickGO ontologyBLASTP
168533516867651431major facilitator superfamily MFS_1QuickGO ontologyBLASTP
16868791687820942inosine-uridine preferring nucleoside hydrolaseQuickGO ontologyBLASTP
168825616893741119hypothetical proteinBLASTP
16895341689719186hypothetical proteinBLASTP
16898261690221396hypothetical proteinBLASTP
16902181690979762cell division protein FtsKSpoIIIEQuickGO ontologyBLASTP
16911051691893789plasmid replication protein RepBQuickGO ontologyBLASTP
16918771692104228hypothetical proteinBLASTP
169212416932421119HNH endonuclease domain proteinQuickGO ontologyBLASTP
169324216943331092Adenine-specific methyltransferase EcoRIQuickGO ontologyBLASTP
169441116956311221Phage integrase familyQuickGO ontologyBLASTP
169623516975661332formyl-coenzyme A transferaseQuickGO ontologyBLASTP
169777116989071137secreted beta-mannosidaseQuickGO ontologyBLASTP
169977117008741104Putative Auxin Efflux Carrier AEC FamilyQuickGO ontologyBLASTP
170097917027511773oxalyl-CoA decarboxylaseQuickGO ontologyBLASTP
170295417046121659chloride channel protein EriCQuickGO ontologyBLASTP
170481017101495340collagen adhesion proteinQuickGO ontologyBLASTP