Pre_GI Gene

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Host: NC_011835 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011835:813345 Bifidobacterium animalis subsp. lactis AD011 chromosome, complete

Host Lineage: Bifidobacterium animalis; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Isolated from the fecal sample of a healthy, breast-fed infant. Normal gut bacterium. Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
813345813872528ATP synthase subunit BQuickGO ontologyBLASTP
813926814156231ATP synthase F0 subunit CQuickGO ontologyBLASTP
814208815020813ATP synthase subunit AQuickGO ontologyBLASTP
8153128163401029homoserine O-succinyltransferaseQuickGO ontologyBLASTP
8164618178551395transporterQuickGO ontologyBLASTP
818003818944942Inosine-uridine nucleoside N-ribohydrolaseQuickGO ontologyBLASTP
8193808205251146hypothetical proteinBLASTP
820854821345492hypothetical proteinBLASTP
821342822103762plasmid transfer proteinQuickGO ontologyBLASTP
822229823017789RepB proteinQuickGO ontologyBLASTP
8232488243661119HNH endonucleaseQuickGO ontologyBLASTP
8243668254571092modification methylase EcoRIQuickGO ontologyBLASTP
8255358267551221phage integraseQuickGO ontologyBLASTP
8273598286901332formyl-coenzyme A transferaseQuickGO ontologyBLASTP
8288958300311137mannan endo-14-beta-mannosidaseQuickGO ontologyBLASTP
8308958319981104receptorQuickGO ontologyBLASTP
8321038338751773oxalyl-CoA decarboxylaseQuickGO ontologyBLASTP
8340788356491572voltage-gated chloride channel family proteinQuickGO ontologyBLASTP
8359348413695436collagen adhesion proteinQuickGO ontologyBLASTP
8412848433802097hypothetical proteinBLASTP