Pre_GI: BLASTP Hits

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Query: NC_008149:1440371:1448444 Yersinia pestis Nepal516, complete genome

Start: 1448444, End: 1448863, Length: 420

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Isolated from a soil sample from Nepal. Causative agent of plague. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017265:2940539:295157429515742951993420Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein1e-58224
NC_017168:2535732:254557025455702545989420Yersinia pestis A1122 chromosome, complete genomehypothetical protein1e-58224
NC_003143:3191246:320108432010843201503420Yersinia pestis CO92, complete genomehypothetical protein1e-58224
NC_004088:1510467:151852415185241518943420Yersinia pestis KIM, complete genomehypothetical protein1e-58224
NC_005810:3021913:303208930320893032508420Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein4e-58223
NC_010465:1427170:143635714363571436752396Yersinia pseudotuberculosis YPIII, complete genomeprotein of unknown function DUF12406e-54209
NC_008150:2574794:258467625846762585071396Yersinia pestis Antiqua, complete genomehypothetical protein6e-54209
NC_006155:3333303:334334833433483343767420Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein3e-43173
NC_010634:3250810:326085632608563261251396Yersinia pseudotuberculosis PB1/+, complete genomehypothetical protein7e-39159
NC_008150:2574794:258421925842192584614396Yersinia pestis Antiqua, complete genomehypothetical protein5e-37152
NC_005810:3021913:303165630316563032051396Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein5e-37152
NC_004088:1510467:151898115189811519376396Yersinia pestis KIM, complete genomehypothetical protein5e-37152
NC_010465:1427170:143681414368141437209396Yersinia pseudotuberculosis YPIII, complete genomeprotein of unknown function DUF12405e-37152
NC_003143:3191246:320065132006513201046396Yersinia pestis CO92, complete genomehypothetical protein5e-37152
NC_008149:1440371:144890114489011449296396Yersinia pestis Nepal516, complete genomehypothetical protein5e-37152
NC_017168:2535732:254513725451372545532396Yersinia pestis A1122 chromosome, complete genomehypothetical protein5e-37152
NC_017265:2940539:295114129511412951536396Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein5e-37152
NC_010634:3250810:326039932603993260794396Yersinia pseudotuberculosis PB1/+, complete genomehypothetical protein1e-36151
NC_006155:3333303:334291533429153343310396Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein1e-36151
NC_008150:2574794:258376025837602584155396Yersinia pestis Antiqua, complete genomehypothetical protein2e-33140
NC_003143:3191246:320019232001923200587396Yersinia pestis CO92, complete genomehypothetical protein2e-33140
NC_004088:1510467:151944015194401519835396Yersinia pestis KIM, complete genomehypothetical protein2e-33140
NC_010634:3250810:325994032599403260335396Yersinia pseudotuberculosis PB1/+, complete genomehypothetical protein2e-33140
NC_006155:3333303:334245633424563342851396Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein2e-33140
NC_010465:1427170:143727314372731437668396Yersinia pseudotuberculosis YPIII, complete genomeprotein of unknown function DUF12402e-33140
NC_014029:3171627:318060031806003180995396Yersinia pestis Z176003 chromosome, complete genomehypothetical protein2e-33140
NC_017154:2876545:288543628854362885831396Yersinia pestis D106004 chromosome, complete genomehypothetical protein2e-33140
NC_017168:2535732:254467825446782545073396Yersinia pestis A1122 chromosome, complete genomehypothetical protein2e-33140
NC_017265:2940539:295068229506822951077396Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein2e-33140
NC_006155:3333303:334383133438313344229399Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein3e-32136
NC_009708:1403434:141045814104581410856399Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein5e-31132
NC_004088:1510467:151806215180621518460399Yersinia pestis KIM, complete genomehypothetical protein1e-30131
NC_005810:3021913:303257230325723032970399Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein1e-30131
NC_008150:2574794:258513525851352585533399Yersinia pestis Antiqua, complete genomehypothetical protein1e-30131
NC_003143:3191246:320156732015673201965399Yersinia pestis CO92, complete genomehypothetical protein1e-30131
NC_008149:1440371:144798214479821448380399Yersinia pestis Nepal516, complete genomehypothetical protein1e-30131
NC_014029:3171627:317922231792223179620399Yersinia pestis Z176003 chromosome, complete genomehypothetical protein1e-30131
NC_017154:2876545:288681128868112887209399Yersinia pestis D106004 chromosome, complete genomehypothetical protein1e-30131
NC_017168:2535732:254605325460532546451399Yersinia pestis A1122 chromosome, complete genomehypothetical protein1e-30131
NC_010634:3250810:326148032614803261713234Yersinia pseudotuberculosis PB1/+, complete genomehypothetical protein2e-27120
NC_005810:3021913:303096030309603031253294Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein2e-27120
NC_010465:1427170:143589514358951436128234Yersinia pseudotuberculosis YPIII, complete genomehypothetical protein5e-26116
NC_017265:2940539:295205729520572952404348Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein7e-1992.4
NC_012962:869295:891202891202891636435Photorhabdus asymbiotica, complete genomehypothetical protein3e-1063.9
NC_012962:869295:888750888750889151402Photorhabdus asymbiotica, complete genomemembrane protein3e-1063.5
NC_012962:869295:889595889595889972378Photorhabdus asymbiotica, complete genomehypothetical protein5e-0959.7
NC_013421:4006085:401738940173894017817429Pectobacterium wasabiae WPP163, complete genomeprotein of unknown function DUF12404e-0856.6
NC_013421:4006085:401557240155724015979408Pectobacterium wasabiae WPP163, complete genomeprotein of unknown function DUF12408e-0855.8
NC_008150:2822689:282835528283552828756402Yersinia pestis Antiqua, complete genomehypothetical protein1e-0755.5
NC_003143:3115933:312208331220833122484402Yersinia pestis CO92, complete genomehypothetical protein1e-0755.5
NC_017154:3188795:320173932017393202140402Yersinia pestis D106004 chromosome, complete genomehypothetical protein1e-0755.5
NC_005810:1230976:123528012352801235720441Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein1e-0755.5
NC_004088:1265730:127867412786741279114441Yersinia pestis KIM, complete genomehypothetical protein1e-0755.5
NC_008149:1195614:120855812085581208998441Yersinia pestis Nepal516, complete genomehypothetical protein1e-0755.5
NC_017168:2626996:263994026399402640380441Yersinia pestis A1122 chromosome, complete genomehypothetical protein1e-0755.5
NC_003143:3115933:312273831227383123118381Yersinia pestis CO92, complete genomehypothetical protein4e-0753.5
NC_008150:2822689:282901028290102829390381Yersinia pestis Antiqua, complete genomehypothetical protein4e-0753.5
NC_004088:1265730:127804012780401278441402Yersinia pestis KIM, complete genomehypothetical protein4e-0753.5
NC_005810:1230976:123595212359521236353402Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein4e-0753.5
NC_008149:1195614:120792412079241208325402Yersinia pestis Nepal516, complete genomemembrane protein4e-0753.5
NC_017154:3188795:320110532011053201506402Yersinia pestis D106004 chromosome, complete genomehypothetical protein4e-0753.5
NC_017168:2626996:263930626393062639707402Yersinia pestis A1122 chromosome, complete genomehypothetical protein4e-0753.5
NC_013421:4006085:401647940164794016883405Pectobacterium wasabiae WPP163, complete genomeprotein of unknown function DUF12402e-0651.2
NC_013421:4006085:401511640151164015520405Pectobacterium wasabiae WPP163, complete genomeprotein of unknown function DUF12406e-0649.3