Pre_GI: BLASTP Hits

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Query: NC_007951:2206263:2223410 Burkholderia xenovorans LB400 chromosome 1, complete sequence

Start: 2223410, End: 2224009, Length: 600

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015136:1301576:131367313136731314269597Burkholderia sp. CCGE1001 chromosome 1, complete sequenceresolvase3e-100363
NC_014307:1619000:163414016341401634727588Ralstonia solanacearum CFBP2957 chromosome, complete genomeresolvase, N-:resolvase helix-turN-helix region5e-95346
NC_007347:3612918:362522236252223625824603Ralstonia eutropha JMP134 chromosome 1, complete sequenceResolvase, N-terminal:Resolvase helix-turn-helix region4e-76283
NC_011757:5742290:576114257611425761774633Methylobacterium chloromethanicum CM4, complete genomeResolvase domain9e-28123
NC_020908:2466446:247528524752852475920636Octadecabacter arcticus 238, complete genomeDNA integration/recombination/inversion protein5e-22103
NC_011894:6516856:654076265407626541397636Methylobacterium nodulans ORS 2060, complete genomeResolvase domain protein5e-21100
NC_014034:1330843:134000413400041340639636Rhodobacter capsulatus SB1003 chromosome, complete genomerecombinase4e-2097.8
NC_016812:463000:472460472460473137678Sinorhizobium fredii HH103, complete genometransposon Tn552 DNA-invertase binR1e-1996.7
NC_012560:4350465:435919143591914359760570Azotobacter vinelandii DJ, complete genomeResolvase-like protein2e-1685.5
NC_021150:4350461:435918743591874359756570Azotobacter vinelandii CA6, complete genomeResolvase-like protein2e-1685.5
NC_008702:815264:829733829733830302570Azoarcus sp. BH72, complete genomeputative resolvase2e-1685.5
NC_011894:6220791:623758162375816238177597Methylobacterium nodulans ORS 2060, complete genome2e-1582.4
NC_012559:1635922:165037916503791650963585Laribacter hongkongensis HLHK9, complete genomeTransposon Tn2501 resolvase5e-1477.8
NC_015381:3607626:361913336191333619708576Burkholderia gladioli BSR3 chromosome 1, complete sequenceTransposon Tn2501 resolvase6e-1477.4
NC_012724:3222415:323478532347853235360576Burkholderia glumae BGR1 chromosome 1, complete genomeResolvase6e-1477.4
NC_010508:2776283:278807327880732788648576Burkholderia cenocepacia MC0-3 chromosome 1, complete sequenceResolvase domain1e-1376.3
NC_013456:2528284:253422625342262534834609Vibrio sp. Ex25 chromosome 1, complete genomeresolvase putative2e-1375.9
NC_015410:2258800:227344222734422274011570Pseudomonas mendocina NK-01 chromosome, complete genomehypothetical protein8e-1373.6
NC_015740:2614317:262086026208602621420561Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completehypothetical protein3e-1272
NC_008060:1945597:195529719552971955875579Burkholderia cenocepacia AU 1054 chromosome 1, complete sequenceResolvase-like3e-1271.6
NC_008542:2631138:264083826408382641416579Burkholderia cenocepacia HI2424 chromosome 1, complete sequenceResolvase, N-terminal domain3e-1271.6
NC_010338:1394550:140808814080881408630543Caulobacter sp. K31, complete genomeResolvase domain7e-1270.5
NC_006363:36959:478534785348404552Nocardia farcinica IFM 10152 plasmid pNF2, complete sequenceputative resolvase3e-1168.6
NC_018678:1820390:183113018311301831720591Alteromonas macleodii str. 'English Channel 673' chromosome,resolvase3e-1168.2
NC_010545:11950:274182741827957540Corynebacterium urealyticum DSM 7109, complete genomeputative resolvase4e-1167.8
NC_018080:3088866:309182730918273092387561Pseudomonas aeruginosa DK2 chromosome, complete genomeresolvase domain-containing protein4e-1167.8
NC_016846:24500:256552565526215561Klebsiella pneumoniae subsp. pneumoniae HS11286 plasmid pKPHS2,Tn4653 resolvase5e-1167.4
NC_009256:458649:476097476097476684588Burkholderia vietnamiensis G4 chromosome 1, complete sequenceresolvase domain-containing protein8e-1167
NC_008782:1863853:187305118730511873632582Acidovorax sp. JS42, complete genomeResolvase, N-terminal domain9e-1166.6
NC_016818:859181:868333868333868899567Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completesite-specific recombinase, DNA invertase Pin1e-1066.6
NC_015733:5909821:592850459285045929064561Pseudomonas putida S16 chromosome, complete genomeTn501 transposition resolvase1e-1066.2
NC_009074:94000:102912102912103490579Burkholderia pseudomallei 668 chromosome I, complete sequenceresolvase, N-terminal:Resolvase helix-turn-helix region3e-1065.1
NC_008781:4178115:419245341924534193028576Polaromonas naphthalenivorans CJ2, complete genomeResolvase, N-terminal domain3e-1065.1
NC_012969:1574330:158524815852481585832585Methylovorus glucosetrophus SIP3-4 chromosome, complete genomeResolvase domain-containing protein4e-1064.7
NC_007434:1322500:134103513410351341610576Burkholderia pseudomallei 1710b chromosome I, complete sequencetransposon Tn2501 resolvase4e-1064.7
NC_009140:121107:124082124082124699618Salmonella enterica enterica sv Newport str. SL254, complete4e-1064.7
NC_015733:4130000:414638341463834146976594Pseudomonas putida S16 chromosome, complete genometransposon resolvase4e-1064.7
NC_003384:109036:122365122365122922558Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmidresolvase4e-1064.3
NC_008344:1364142:137394513739451374502558Nitrosomonas eutropha C91, complete genomeResolvase, N-terminal domain4e-1064.3
NC_008341:29038:398433984340400558Nitrosomonas eutropha C91 plasmid1, complete sequenceResolvase, N-terminal domain4e-1064.3
NC_005773:4797242:481127048112704811839570Pseudomonas syringae pv. phaseolicola 1448A, complete genomehypothetical protein5e-1064.3
NC_016027:1776300:177822117782211778796576Gluconacetobacter xylinus NBRC 3288, complete genomeDNA resolvase9e-1063.5
NC_015594:214500:224207224207224749543Sphingobium chlorophenolicum L-1 chromosome chromosome 2, completeResolvase domain-containing protein9e-1063.5
NC_015145:92397:117011117011117577567Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genomesite-specific recombinase, DNA invertase Pin8e-1063.5
NC_013456:2984491:299238029923802992952573Vibrio sp. Ex25 chromosome 1, complete genomeresolvase N-terminal domain protein1e-0963.2
NC_008609:1976403:206462720646272065184558Pelobacter propionicus DSM 2379, complete genomeResolvase, N-terminal domain1e-0962.8
NC_010002:2933909:295119029511902951747558Delftia acidovorans SPH-1, complete genomeResolvase domain1e-0962.8
NC_011886:177039:188420188420188986567Arthrobacter chlorophenolicus A6, complete genomeResolvase domain protein1e-0962.8
NC_006625:63342:812898128981846558Klebsiella pneumoniae NTUH-K2044 plasmid pK2044, complete sequenceresolvase domain-containing protein2e-0962.4
NC_008345:4107847:411968141196814120238558Shewanella frigidimarina NCIMB 400, complete genomeResolvase, N-terminal domain protein2e-0962.4
NC_015593:2553500:256540025654002565978579Sphingobium chlorophenolicum L-1 chromosome chromosome 1, completeResolvase domain-containing protein3e-0962
NC_009342:589741:594029594029594808780Corynebacterium glutamicum R chromosome, complete genomehypothetical protein6e-0960.8
NC_020908:1472981:148177214817721482320549Octadecabacter arcticus 238, complete genomeDNA integration/recombination/inversion protein8e-0960.5
NC_006351:520500:532668532668533243576Burkholderia pseudomallei K96243 chromosome 2, complete sequencetransposon Tn2501 resolvase8e-0960.5
NC_011663:2123388:213600421360042136555552Shewanella baltica OS223 chromosome, complete genomeresolvase domain-containing protein9e-0960.1
NC_011365:502620:511327511327511944618Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeResolvase domain9e-0960.1
NC_014311:1635408:165529016552901655868579Ralstonia solanacearum PSI07 chromosome, complete genomesite-specific DNA recombinase; e14 prophage1e-0859.7
NC_010125:2295500:230445923044592305064606Gluconacetobacter diazotrophicus PAl 5, complete genomeputative resolvase1e-0859.7
NC_015740:1291739:129359212935921294155564Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeTnAtcArs resolvase2e-0859.3
NC_015576:1442713:146084114608411461422582Mycobacterium sp. JDM601 chromosome, complete genomesite-specific recombinase PinR2e-0859.3
NC_012752:1:673267327292561Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum) plasmidputative resolvase HDEF_p00072e-0859.3
NC_008463:1293079:130641013064101306970561Pseudomonas aeruginosa UCBPP-PA14, complete genomeputative resolvase, essential for transposition2e-0858.9
NC_009349:78000:817558175510125019496Aeromonas salmonicida subsp. salmonicida A449 plasmid 4, complete2e-0858.9
NC_004757:905417:914348914348914908561Nitrosomonas europaea ATCC 19718, complete genomeSite-specific recombinase3e-0858.5
NC_016616:760145:771982771982772542561Dechlorosoma suillum PS chromosome, complete genomesite-specific recombinase, DNA invertase Pin3e-0858.5
NC_007650:2429307:244797324479732448641669Burkholderia thailandensis E264 chromosome II, complete sequenceTransposon Tn2501 resolvase3e-0858.2
NC_009656:5475540:549848254984825498871390Pseudomonas aeruginosa PA7 chromosome, complete genometransposon Tn21 resolvase3e-0858.2
NC_002678:3210751:322303432230343223579546Mesorhizobium loti MAFF303099, complete genomeDNA invertase gene, RlgA3e-0858.2
NC_007622:1397407:142034914203491420960612Staphylococcus aureus RF122, complete genomerecombinase5e-0857.8
NC_014963:113015:129583129583130182600Terriglobus saanensis SP1PR4 chromosome, complete genomeResolvase domain-containing protein5e-0857.8
NC_017150:853708:858568858568859134567Acetobacter pasteurianus IFO 3283-01-42C, complete genomeDNA resolvase5e-0857.8
NC_004578:2560473:256975325697532570166414Pseudomonas syringae pv. tomato str. DC3000, complete genomeresolvase, putative4e-0857.8
NC_014549:14000:260192601926693675Arthrobacter arilaitensis Re117 plasmid pRE117-1, completeputative resolvase4e-0857.8
NC_009838:81913:945989459895077480Escherichia coli APEC O1 plasmid pAPEC-O1-R, complete sequencerecombinase4e-0857.8
NC_009445:6621996:665476866547686655373606Bradyrhizobium sp. ORS 278 chromosome, complete genometransposon Tn21 resolvase7e-0857.4
NC_013757:1438812:145034114503411450970630Geodermatophilus obscurus DSM 43160, complete genomeResolvase domain protein6e-0857.4
NC_009439:4661102:467014646701464670841696Pseudomonas mendocina ymp, complete genomeresolvase domain-containing protein6e-0857.4
NC_015136:1301576:130993413099341310527594Burkholderia sp. CCGE1001 chromosome 1, complete sequenceresolvase6e-0857.4
NC_009349:78000:972929729297852561Aeromonas salmonicida subsp. salmonicida A449 plasmid 4, completeTnpR resolvase6e-0857.4
NC_008573:195317:209233209233209793561Shewanella sp. ANA-3 plasmid 1, complete sequenceResolvase, N-terminal domain protein6e-0857.4
NC_016860:4055117:407155640715564072116561Salmonella enterica subsp. enterica serovar Typhimurium strtransposon Tn21 resolvase TnpR6e-0857.4
NC_017328:1075535:111282011128201113380561Shigella flexneri 2002017 chromosome, complete genomeTransposon Tn21 resolvase6e-0857.4
NC_008120:62000:838588385884478621Yersinia pestis Antiqua plasmid pMT, complete sequenceresolvase1e-0756.6
NC_005815:61148:959419594196561621Yersinia pestis biovar Microtus str. 91001 plasmid pMT1, completeputative resolvase1e-0756.6
NC_004838:51013:601616016160781621Yersinia pestis KIM plasmid pMT-1, complete sequenceputative resolvase1e-0756.6
NC_008118:56777:883038830388923621Yersinia pestis Nepal516 plasmid pMT, complete sequenceresolvase1e-0756.6
NC_003134:64672:712167121671836621Yersinia pestis CO92 plasmid pMT1, complete sequenceputative resolvase1e-0756.6
NC_010158:92819:101955101955102575621Yersinia pestis Angola plasmid pMT-pPCP, complete sequenceputative resolvase1e-0756.6
NC_009378:106193:124395124395125015621Yersinia pestis Pestoides F plasmid MT, complete sequenceresolvase1e-0756.6
NC_011886:1035500:104683710468371047421585Arthrobacter chlorophenolicus A6, complete genomeResolvase domain protein1e-0756.2
NC_011777:161505:179670179670180269600Bacillus cereus AH820 plasmid pAH820_272, complete sequencetransposon resolvase1e-0756.2
NC_007651:3560652:357357235735723574225654Burkholderia thailandensis E264 chromosome I, complete sequenceresolvase TnpR2e-0755.5
NC_014006:611592:626744626744627286543Sphingobium japonicum UT26S chromosome 1, complete genomeinvertase/recombinase like protein3e-0755.1
NC_010622:2385932:239489423948942395490597Burkholderia phymatum STM815 chromosome 1, complete sequenceResolvase domain protein3e-0755.1
NC_012490:3094857:309723030972303097820591Rhodococcus erythropolis PR4, complete genomesite-specific recombinase4e-0754.7
NC_014841:248487:263402263402263989588Pantoea sp. At-9b plasmid pPAT9B04, complete sequenceResolvase domain protein4e-0754.7
NC_015633:2801321:280895428089542809553600Vibrio anguillarum 775 chromosome chromosome I, complete sequenceDNA integration/recombination/inversion protein5e-0754.3
NC_007626:3522265:353562235356223536050429Magnetospirillum magneticum AMB-1, complete genomeSite-specific recombinase5e-0754.3
NC_009921:5681677:569052656905265691095570Frankia sp. EAN1pec, complete genomeResolvase domain6e-0753.9
NC_010610:755000:783261783261783845585Lactobacillus fermentum IFO 3956, complete genomehypothetical protein6e-0753.9
NC_013716:5201097:521190952119095212505597Citrobacter rodentium ICC168, complete genomeputative site-specific DNA recombinase7e-0753.9
NC_004431:3012668:302138630213863021976591Escherichia coli CFT073, complete genomePutative DNA-invertase from lambdoid prophage Rac1e-0653.5
NC_012947:2189533:219887621988762199466591Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeresolvase1e-0653.5
NC_012967:1593101:160138716013871601977591Escherichia coli B str. REL606 chromosome, complete genomeputative site-specific recombinase1e-0653.5
NC_017323:1644000:167634516763451676899555Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequenceResolvase domain-containing protein1e-0653.1
NC_012967:1403733:142469014246901425280591Escherichia coli B str. REL606 chromosome, complete genomeputative site-specific recombinase1e-0653.1
NC_012947:2366000:237314923731492373739591Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeresolvase1e-0653.1
NC_007606:1209132:121813312181331218684552Shigella dysenteriae Sd197, complete genomeDNA invertase-like protein1e-0652.8
NC_010999:623489:624948624948625535588Lactobacillus casei, complete genomePutative uncharacterized protein orf-1951e-0652.8
NC_013209:2782500:278940827894082789986579Acetobacter pasteurianus IFO 3283-01, complete genomeDNA resolvase2e-0652.4
NC_000913:1625500:163164616316461632236591Escherichia coli K12, complete genomeQin prophage; predicted site-specific recombinase2e-0652.4
NC_010473:1712984:172127117212711721861591Escherichia coli str. K-12 substr. DH10B, complete genomeQin prophage; predicted site-specific recombinase2e-0652.4
NC_013235:3913000:392419139241913924832642Nakamurella multipartita DSM 44233, complete genomeResolvase domain protein2e-0652.4
NC_004547:2810151:282176428217642822402639Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeresolvase2e-0652.4
NC_007946:289425:302117302117302680564Escherichia coli UTI89, complete genomeputative resolvase2e-0652.4
AC_000091:1627049:163533616353361635926591Escherichia coli W3110 DNA, complete genomepredicted site-specific recombinase2e-0652.4
NC_012759:1517500:152370515237051524295591Escherichia coli BW2952 chromosome, complete genomeQin prophage; putative site-specific recombinase2e-0652.4
NC_017100:2782303:278920027892002789778579Acetobacter pasteurianus IFO 3283-03, complete genomeDNA resolvase2e-0652.4
NC_017108:2779303:278653727865372787115579Acetobacter pasteurianus IFO 3283-12, complete genomeDNA resolvase2e-0652.4
NC_017111:2779321:278655527865552787133579Acetobacter pasteurianus IFO 3283-32, complete genomeDNA resolvase2e-0652.4
NC_017121:2781000:278795727879572788535579Acetobacter pasteurianus IFO 3283-07, complete genomeDNA resolvase2e-0652.4
NC_017125:2782283:278918027891802789758579Acetobacter pasteurianus IFO 3283-22, complete genomeDNA resolvase2e-0652.4
NC_017146:2782325:278922227892222789800579Acetobacter pasteurianus IFO 3283-26, complete genomeDNA resolvase2e-0652.4
NC_017150:2689920:269715426971542697732579Acetobacter pasteurianus IFO 3283-01-42C, complete genomeDNA resolvase2e-0652.4
NC_011415:644811:652676652676653266591Escherichia coli SE11 chromosome, complete genomeputative phage resolvase3e-0652
NC_007777:2638580:264382526438252644376552Frankia sp. CcI3, complete genomeResolvase-like2e-0652
NC_008526:565902:568156568156568743588Lactobacillus casei ATCC 334, complete genomeSite-specific recombinase, DNA invertase Pin related protein2e-0652
NC_012918:1174412:118527311852731185842570Geobacter sp. M21 chromosome, complete genomeresolvase3e-0651.6
NC_013173:953633:967010967010967573564Desulfomicrobium baculatum DSM 4028, complete genomeResolvase domain protein3e-0651.6
NC_011666:2259447:227068822706882271299612Methylocella silvestris BL2, complete genomeResolvase domain protein4e-0651.6
NC_008609:1394377:139971913997191400297579Pelobacter propionicus DSM 2379, complete genomeResolvase, N-terminal domain4e-0651.6
NC_009052:2512373:251582725158272516417591Shewanella baltica OS155, complete genomeResolvase, N-terminal domain4e-0651.2
NC_014972:1923035:192995119299511930544594Desulfobulbus propionicus DSM 2032 chromosome, complete genomeResolvase domain-containing protein4e-0651.2
NC_013364:1596278:160503916050391605587549Escherichia coli O111:H- str. 11128, complete genomeputative site-specific recombinases6e-0650.8
NC_003919:2824000:283225428322542833162909Xanthomonas axonopodis pv. citri str. 306, complete genomeresolvase9e-0650.1