Pre_GI: BLASTP Hits

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Query: NC_007948:1695500:1712930 Polaromonas sp. JS666, complete genome

Start: 1712930, End: 1714306, Length: 1377

Host Lineage: Polaromonas; Polaromonas; Comamonadaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This strain was isolated from sediment contaminated with cis-dichloroethane (cDCE), a common pollutant resulting from widespread manufacture and use of industrial solvents. This bacterium is the only known organism capable of using cDCE as a sole carbon and energy source. The ability of this strain to convert ethene to epoxyethane suggests that the first step in the cDCE biodegradation pathway is the oxidation of cDCE to an epoxide compound. Bacteria that are able to grow on cDCE are rare, and have only been found in very few highly selective artificial environments. The discovery of this bacteria may provide a low cost, self-sustaining bioremediation method in areas where cDCE is a problem contaminant.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015422:4508028:4545748454574845471271380Alicycliphilus denitrificans K601 chromosome, complete genometransposase IS4 family protein0694
NC_018691:318662:3297063297063311331428Alcanivorax dieselolei B5 chromosome, complete genomePutative transposase, IS4 family2e-118426
NC_008027:5576458:5584103558410355854881386Pseudomonas entomophila L48, complete genometransposase, IS4 family2e-111403
NC_015410:3093465:3106275310627531076541380Pseudomonas mendocina NK-01 chromosome, complete genomeIS4 family transposase2e-110399
NC_007948:517893:519384519384519866483Polaromonas sp. JS666, complete genome3e-62239
NC_015556:130437:146600146600147196597Pseudomonas fulva 12-X chromosome, complete genome4e-39162
NC_007404:2048000:206030620603062061073768Thiobacillus denitrificans ATCC 25259, complete genomehypothetical protein3e-31136
NC_013093:1909305:1910513191051319117331221Actinosynnema mirum DSM 43827, complete genometransposase IS4 family protein7e-27122
NC_004369:1268956:1282157128215712833711215Corynebacterium efficiens YS-314, complete genomeputative transposase2e-21103
NC_004369:41236:4297842978441921215Corynebacterium efficiens YS-314, complete genomehypothetical protein2e-21103
NC_004369:437594:4467754467754479621188Corynebacterium efficiens YS-314, complete genomehypothetical protein5e-21102
NC_013440:3947493:3961875396187539632241350Haliangium ochraceum DSM 14365, complete genometransposase IS4 family protein2e-20100
NC_009953:3509229:3529981352998135313361356Salinispora arenicola CNS-205 chromosome, complete genometransposase IS4 family protein2e-20100
NC_009921:4035225:4059514405951440607791266Frankia sp. EAN1pec, complete genometransposase IS4 family protein1e-1998.2
NC_011768:79297:8647786477877451269Desulfatibacillum alkenivorans AK-01, complete genometransposase IS4 family protein1e-1895.1
NC_015422:4508028:4509693450969345108981206Alicycliphilus denitrificans K601 chromosome, complete genometransposase IS4 family protein2e-1894.4
NC_004431:3513147:3532771353277135341201350Escherichia coli CFT073, complete genomeTransposase insG for insertion sequence element IS45e-1892.8
NC_007384:4095016:4114725411472541160711347Shigella sonnei Ss046, complete genomeIS4 ORF4e-1892.8
NC_017328:3935185:3943321394332139446491329Shigella flexneri 2002017 chromosome, complete genomeIS4 ORF4e-1892.8
NC_007384:1696831:1711913171191317132591347Shigella sonnei Ss046, complete genomeIS4 ORF4e-1892.8
NC_016822:1781644:1784123178412317854691347Shigella sonnei 53G, complete genomeIS4 orf4e-1892.8
NC_016822:2678691:2678691267869126800371347Shigella sonnei 53G, complete genomeIS4 orf4e-1892.8
NC_007613:4119771:4131701413170141330171317Shigella boydii Sb227, complete genomeIS4 ORF6e-1892.4
NC_004741:4132056:4132056413205641333841329Shigella flexneri 2a str. 2457T, complete genomeIS4 orf6e-1892.4
NC_021150:3303959:3306478330647833076441167Azotobacter vinelandii CA6, complete genomeTransposase, IS4 protein8e-1892
NC_012560:3303961:3306480330648033076461167Azotobacter vinelandii DJ, complete genomeTransposase, IS4 protein8e-1892
NC_008258:269806:2883692883692897151347Shigella flexneri 5 str. 8401, complete genomeIS4 ORF7e-1892
NC_004337:3590323:3938517393851739398631347Shigella flexneri 2a str. 301, complete genomeIS4 ORF7e-1892
NC_017328:3655876:3674947367494736762931347Shigella flexneri 2002017 chromosome, complete genomeIS4 ORF7e-1892
NC_007384:2587876:2587876258787625892221347Shigella sonnei Ss046, complete genomeIS4 ORF2e-1790.9
NC_019673:3253650:3265193326519332664581266Saccharothrix espanaensis DSM 44229 complete genomeTransposase, IS4 family2e-1790.9
NC_019673:2051363:2104510210451021057841275Saccharothrix espanaensis DSM 44229 complete genomeTransposase, IS4 family3e-1790.5
NC_019673:1384795:1399984139998414012491266Saccharothrix espanaensis DSM 44229 complete genomeTransposase, IS4 family3e-1790.5
NC_019673:8057941:8062858806285880641231266Saccharothrix espanaensis DSM 44229 complete genomeTransposase, IS4 family3e-1790.5
NC_011751:4992500:5010215501021550115611347Escherichia coli UMN026 chromosome, complete genomeputative IS4 transposase; KpLE2 phage-like element2e-1790.5
NC_000913:4494773:4500126450012645014541329Escherichia coli K12, complete genomeKpLE2 phage-like element; IS4 predicted transposase2e-1790.5
NC_010473:4596500:4601934460193446032621329Escherichia coli str. K-12 substr. DH10B, complete genomeKpLE2 phage-like element; IS4 predicted transposase2e-1790.5
AC_000091:4501430:4506783450678345081111329Escherichia coli W3110 DNA, complete genomeIS4 predicted transposase2e-1790.5
NC_012759:4433500:4438861443886144401891329Escherichia coli BW2952 chromosome, complete genomeKpLE2 phage-like element; IS4 putative transposase2e-1790.5
NC_012947:3917619:3928785392878539301131329Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completetransposase IS4 family protein2e-1790.5
NC_012967:4473368:4483995448399544853231329Escherichia coli B str. REL606 chromosome, complete genomeIS4 putative transposase2e-1790.5
NC_017047:4379989:4402292440229244036141323Rahnella aquatilis HX2 chromosome, complete genometransposase IS4 family protein3e-1790.1
NC_015061:3725921:3730563373056337318851323Rahnella sp. Y9602 chromosome, complete genometransposase IS4 family protein3e-1790.1
NC_017047:3793000:3795224379522437965461323Rahnella aquatilis HX2 chromosome, complete genometransposase IS4 family protein3e-1790.1
NC_004337:3590323:3917660391766039190061347Shigella flexneri 2a str. 301, complete genomeIS4 ORF4e-1789.7
NC_009921:6691089:6701579670157967028411263Frankia sp. EAN1pec, complete genometransposase IS4 family protein4e-1686.7
NC_009921:3255833:3272508327250832737701263Frankia sp. EAN1pec, complete genometransposase IS4 family protein4e-1686.7
NC_009921:7660795:7677440767744076787021263Frankia sp. EAN1pec, complete genometransposase IS4 family protein3e-1686.7
NC_009921:7660795:7674205767420576754671263Frankia sp. EAN1pec, complete genometransposase IS4 family protein3e-1686.7
NC_016109:5768000:5795206579520657964471242Kitasatospora setae KM-6054, complete genomeputative transposase4e-1686.3
NC_015957:196000:2076502076502090081359Streptomyces violaceusniger Tu 4113 chromosome, complete genometransposase IS4 family protein6e-1685.9
NC_013716:4408201:4408201440820144095381338Citrobacter rodentium ICC168, complete genomeISCro3 transposase5e-1582.8
NC_007777:2543475:2556883255688325581211239Frankia sp. CcI3, complete genometransposase, IS41e-1481.6
NC_015656:632960:6453346453346465961263Frankia symbiont of Datisca glomerata chromosome, complete genometransposase IS4 family protein2e-1480.5
NC_015656:632960:6491266491266503881263Frankia symbiont of Datisca glomerata chromosome, complete genometransposase IS4 family protein2e-1480.5
NC_015656:2795784:2804695280469528059301236Frankia symbiont of Datisca glomerata chromosome, complete genometransposase IS4 family protein3e-1480.1
NC_015656:4850833:4855454485545448566891236Frankia symbiont of Datisca glomerata chromosome, complete genometransposase IS4 family protein3e-1480.1
NC_015656:3232809:3239387323938732406221236Frankia symbiont of Datisca glomerata chromosome, complete genometransposase IS4 family protein3e-1480.1
NC_015656:3300747:3306809330680933080441236Frankia symbiont of Datisca glomerata chromosome, complete genometransposase IS4 family protein3e-1480.1
NC_015635:1906790:1911284191128419124231140Microlunatus phosphovorus NM-1, complete genomeputative transposase1e-1275.1
NC_015635:5222000:5235067523506752362811215Microlunatus phosphovorus NM-1, complete genomeputative transposase1e-1274.7
NC_015635:2001539:2008401200840120096151215Microlunatus phosphovorus NM-1, complete genomeputative transposase for insertion sequence element1e-1274.7
NC_015635:4097711:4123611412361141247921182Microlunatus phosphovorus NM-1, complete genomeputative transposase1e-1274.7
NC_005139:2201820:2256801225680122581381338Vibrio vulnificus YJ016 chromosome I, complete sequencetransposase and inactivated derivative3e-1273.2
NC_012912:242709:2468462468462481711326Dickeya zeae Ech1591, complete genometransposase IS4 family protein1e-1171.2
NC_012912:1788308:1815719181571918170441326Dickeya zeae Ech1591, complete genometransposase IS4 family protein1e-1171.2
NC_016943:1037000:1049565104956510509021338Blastococcus saxobsidens DD2, complete genometransposase2e-1170.5
NC_004459:1679335:168432316843231684952630Vibrio vulnificus CMCP6 chromosome I, complete sequenceTransposase and inactivated derivatives4e-1170.1
NC_010625:229478:2380132380132393411329Burkholderia phymatum STM815 plasmid pBPHY01, complete sequencetransposase IS4 family protein4e-1169.7
NC_009254:700891:7008917008917020991209Burkholderia vietnamiensis G4 chromosome 3, complete sequencetransposase, IS4 family protein4e-1169.7
NC_009255:213245:2203062203062215141209Burkholderia vietnamiensis G4 chromosome 2, complete sequencetransposase, IS4 family protein4e-1169.7
NC_009256:2945059:2946142294614229473501209Burkholderia vietnamiensis G4 chromosome 1, complete sequencetransposase, IS4 family protein4e-1169.7
NC_011312:3060371:3060371306037130616961326Aliivibrio salmonicida LFI1238 chromosome chromosome 1, completetransposase5e-1169.3
NC_003155:365500:3710093710093726371629Streptomyces avermitilis MA-4680, complete genomeIS4 family transposase3e-0963.5
NC_013194:102000:1235481235481246511104Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completetransposase IS4 family protein6e-0755.8
NC_013194:102000:1125541125541136571104Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completetransposase IS4 family protein6e-0755.8
NC_013194:1955582:1963647196364719647501104Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completetransposase IS4 family protein6e-0755.8
NC_008278:5012000:502590350259035026388486Frankia alni ACN14a, complete genomehypothetical protein (partial match); putative conserved transposase, IS4 domain.1e-0655.1
NC_009953:4748147:475778747577874758389603Salinispora arenicola CNS-205 chromosome, complete genomehypothetical protein3e-0653.9