Pre_GI: BLASTP Hits

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Query: NC_006361:3047788:3070716 Nocardia farcinica IFM 10152, complete genome

Start: 3070716, End: 3071762, Length: 1047

Host Lineage: Nocardia farcinica; Nocardia; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This type strain was isolated from the bronchus of a male Japanese patient. Opportunistic human pathogen. This genus was originally described from specimens isolated by plating soil suspensions on diagnostic sensitivity test plates augmented with antifungal agents. Organisms in this genus cause opportunistic human pulmonary and systemic nocardiosis. This can complicate existing debilitating conditions such as leukemia, lymphoma, or other neoplasms, or illnesses in patients with compromised immune systems.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014151:3611956:3645262364526236463171056Cellulomonas flavigena DSM 20109 chromosome, complete genomeIntegrase catalytic region4e-114411
NC_014151:3611956:3631363363136336323701008Cellulomonas flavigena DSM 20109 chromosome, complete genomeIntegrase catalytic region1e-111402
NC_014151:856354:8627978627978638041008Cellulomonas flavigena DSM 20109 chromosome, complete genomeIntegrase catalytic region7e-111400
NC_015671:1865752:1872483187248318734901008Cellvibrio gilvus ATCC 13127 chromosome, complete genomeintegrase catalytic subunit3e-110398
NC_015671:3470903:3484356348435634853631008Cellvibrio gilvus ATCC 13127 chromosome, complete genomeintegrase catalytic subunit3e-110398
NC_012803:1552122:1558163155816315591701008Micrococcus luteus NCTC 2665, complete genometransposase8e-88323
NC_010617:1467000:1477774147777414787811008Kocuria rhizophila DC2201, complete genomeputative transposase8e-88323
NC_010617:774914:7895457895457905551011Kocuria rhizophila DC2201, complete genomeputative transposase2e-86319
NC_010617:774914:7984987984987995081011Kocuria rhizophila DC2201, complete genomeputative transposase2e-86319
NC_021064:816000:8267108267108277201011Propionibacterium avidum 44067, complete genomeintegrase catalytic subunit3e-79295
NC_013235:4091185:409404340940434095035993Nakamurella multipartita DSM 44233, complete genomeIntegrase catalytic region4e-75281
NC_006361:2225072:2244167224416722451981032Nocardia farcinica IFM 10152, complete genomeputative transposase3e-74278
NC_019673:6394319:639620163962016396893693Saccharothrix espanaensis DSM 44229 complete genomeTransposase2e-69263
NC_017955:3731480:3775304377530437763441041Modestobacter marinus, complete genomehypothetical protein3e-57222
NC_014391:4644500:465256046525604653531972Micromonospora aurantiaca ATCC 27029 chromosome, complete genomeIntegrase catalytic region1e-56220
NC_016947:70210:914069140691819414Mycobacterium intracellulare MOTT-02 chromosome, complete genomeputative transposase5e-55214
NC_010399:13222:182471824719209963Clavibacter michiganensis subsp. sepedonicus plasmid pCS1, completeputative integrase4e-54212
NC_010407:3174470:318889031888903189852963Clavibacter michiganensis subsp. sepedonicus chromosome, completeputative insertion element IS1121 transposase4e-54212
NC_010407:2038499:204530220453022046264963Clavibacter michiganensis subsp. sepedonicus chromosome, completeputative insertion element IS1121 transposase1e-53210
NC_010399:13222:228812288123843963Clavibacter michiganensis subsp. sepedonicus plasmid pCS1, completeputative transposase3e-53209
NC_010407:32960:427454274543707963Clavibacter michiganensis subsp. sepedonicus chromosome, completeputative insertion element IS1121 transposase3e-53209
NC_010407:151599:164242164242165204963Clavibacter michiganensis subsp. sepedonicus chromosome, completeputative insertion element IS1121 transposase3e-53209
NC_010407:3174470:317934031793403180302963Clavibacter michiganensis subsp. sepedonicus chromosome, completeputative insertion element IS1121 transposase3e-53209
NC_010407:410918:425858425858426820963Clavibacter michiganensis subsp. sepedonicus chromosome, completeputative insertion element IS1121 transposase3e-53209
NC_010407:3132683:315392831539283154890963Clavibacter michiganensis subsp. sepedonicus chromosome, completeputative insertion element IS1121 transposase5e-53208
NC_015514:181773:195606195606196601996Cellulomonas fimi ATCC 484 chromosome, complete genomeintegrase catalytic subunit4e-51201
NC_015514:477935:4917984917984928051008Cellulomonas fimi ATCC 484 chromosome, complete genomeintegrase catalytic subunit6e-51201
NC_019673:6394319:643232664323266433324999Saccharothrix espanaensis DSM 44229 complete genomeTransposase1e-50200
NC_014215:2259290:2277795227779522787991005Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,Integrase, catalytic region3e-50199
NC_015125:1136734:1146013114601311470171005Microbacterium testaceum StLB037, complete genometransposase and inactivated derivatives5e-49194
NC_010407:1114408:113583311358331136795963Clavibacter michiganensis subsp. sepedonicus chromosome, completeputative insertion element ISCmi2 transposase2e-48192
NC_003888:6103534:613988761398876140843957Streptomyces coelicolor A3(2), complete genometransposase6e-47188
NC_003888:56225:773157731578271957Streptomyces coelicolor A3(2), complete genomeIS1652 transposase6e-47188
NC_003888:5114147:5122836512283651238551020Streptomyces coelicolor A3(2), complete genomeIS1652 transposase5e-47188
NC_003888:8613848:862323086232308624186957Streptomyces coelicolor A3(2), complete genomeinsertion element transposase5e-47188
NC_008538:46469:489184891849847930Arthrobacter sp. FB24 plasmid 2, complete sequenceIntegrase, catalytic region3e-46186
NC_010617:774914:7878067878067888521047Kocuria rhizophila DC2201, complete genomeputative transposase5e-46185
NC_014834:3130715:314021431402143141167954Rhodopseudomonas palustris DX-1 chromosome, complete genomeIntegrase catalytic subunit3e-45182
NC_017093:3777178:379027937902793791271993Actinoplanes missouriensis 431, complete genomeputative transposase4e-44179
NC_011071:429204:429842429842430786945Stenotrophomonas maltophilia R551-3, complete genomeIntegrase catalytic region4e-44178
NC_016947:70210:917919179192300510Mycobacterium intracellulare MOTT-02 chromosome, complete genomeputative transposase1e-43177
NC_015859:1631573:164736116473611648317957Corynebacterium variabile DSM 44702 chromosome, complete genomehypothetical protein2e-43176
NC_015859:1631573:164053216405321641488957Corynebacterium variabile DSM 44702 chromosome, complete genomehypothetical protein3e-43175
NC_013169:2351475:235766823576682358624957Kytococcus sedentarius DSM 20547, complete genomeintegrase family protein9e-43174
NC_008146:1748026:1788013178801317890891077Mycobacterium sp. MCS, complete genomeIntegrase, catalytic region7e-42171
NC_018581:759932:771904771904772716813Gordonia sp. KTR9 chromosome, complete genomeTransposase-like protein6e-42171
NC_009656:3869281:3870241387024138716861446Pseudomonas aeruginosa PA7 chromosome, complete genometransposase6e-42171
NC_015514:181773:188131188131189048918Cellulomonas fimi ATCC 484 chromosome, complete genomeintegrase catalytic subunit1e-40167
NC_015422:1643000:164637916463791647326948Alicycliphilus denitrificans K601 chromosome, complete genomeintegrase catalytic subunit1e-40167
NC_008752:725189:733147733147734094948Acidovorax avenae subsp. citrulli AAC00-1, complete genomeIntegrase, catalytic region4e-39162
NC_008752:2334511:234988823498882350835948Acidovorax avenae subsp. citrulli AAC00-1, complete genomeIntegrase, catalytic region4e-39162
NC_008752:585884:593945593945594892948Acidovorax avenae subsp. citrulli AAC00-1, complete genomeIntegrase, catalytic region4e-39162
NC_008752:3684739:370578037057803706727948Acidovorax avenae subsp. citrulli AAC00-1, complete genomeIntegrase, catalytic region4e-39162
NC_009937:4350132:435470243547024355634933Azorhizobium caulinodans ORS 571, complete genometransposase1e-37157
NC_009937:4392108:439582343958234396755933Azorhizobium caulinodans ORS 571, complete genomeputative insertion sequence transposase protein1e-37157
NC_010545:1781393:178694717869471787771825Corynebacterium urealyticum DSM 7109, complete genometransposase for insertion sequence2e-35149
NC_010943:4476654:448185944818594482803945Stenotrophomonas maltophilia K279a, complete genomeputative transposase2e-34147
NC_017223:3345902:335487533548753355825951Bordetella pertussis CS chromosome, complete genometransposase2e-34146
NC_002929:3305682:331465533146553315605951Bordetella pertussis Tohama I, complete genometransposase2e-34146
NC_015563:3979500:399047239904723991419948Delftia sp. Cs1-4 chromosome, complete genomeintegrase catalytic subunit6e-34145
NC_002929:52500:776357763578585951Bordetella pertussis Tohama I, complete genometransposase6e-34145
NC_002929:2589202:259389925938992594849951Bordetella pertussis Tohama I, complete genometransposase6e-34145
NC_002929:3305682:331032833103283311278951Bordetella pertussis Tohama I, complete genometransposase6e-34145
NC_017223:3345902:335054833505483351498951Bordetella pertussis CS chromosome, complete genometransposase6e-34145
NC_017223:51180:776357763578585951Bordetella pertussis CS chromosome, complete genometransposase6e-34145
NC_017223:2618535:261853526185352619485951Bordetella pertussis CS chromosome, complete genometransposase5e-34145
NC_017223:51180:690866908670036951Bordetella pertussis CS chromosome, complete genometransposase7e-34144
NC_017223:51180:574985749858448951Bordetella pertussis CS chromosome, complete genometransposase7e-34144
NC_002929:52500:690866908670036951Bordetella pertussis Tohama I, complete genometransposase7e-34144
NC_002929:52500:574985749858448951Bordetella pertussis Tohama I, complete genometransposase7e-34144
NC_008061:2106848:213340921334092134359951Burkholderia cenocepacia AU 1054 chromosome 2, complete sequenceIntegrase, catalytic region1e-31137
NC_008543:127675:135412135412136362951Burkholderia cenocepacia HI2424 chromosome 2, complete sequenceIntegrase, catalytic region1e-31137
NC_010515:2691000:271081027108102711760951Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceIntegrase catalytic region2e-31136
NC_010512:951527:958183958183959133951Burkholderia cenocepacia MC0-3 chromosome 3, complete sequenceIntegrase catalytic region6e-30131
NC_002678:4618555:463827846382784639069792Mesorhizobium loti MAFF303099, complete genometransposase4e-28125
NC_008595:1844500:185254018525401853325786Mycobacterium avium 104, complete genometransposase4e-28125
NC_013169:87269:936919369194023333Kytococcus sedentarius DSM 20547, complete genome2e-26120
NC_006932:531000:535549535549536420872Brucella abortus biovar 1 str. 9-941 chromosome I, completeP1 ISBm34e-24112
NC_016582:4983222:499637549963754996707333Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegrase family protein2e-23110
NC_015957:527777:539888539888540451564Streptomyces violaceusniger Tu 4113 chromosome, complete genome2e-21103
NC_013169:1845735:185223418522341852767534Kytococcus sedentarius DSM 20547, complete genome6e-2098.6
NC_008595:1844500:185086618508661851156291Mycobacterium avium 104, complete genometransposase1e-1790.9
NC_017075:2689014:269241626924162692856441Rubrivivax gelatinosus IL144, complete genome2e-1789.7
NC_014215:2295500:230089723008972301514618Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,2e-1687
NC_010617:1910388:192070319207031921392690Kocuria rhizophila DC2201, complete genomehypothetical protein3e-1686.7
NC_012441:529500:534037534037534624588Brucella melitensis ATCC 23457 chromosome I, complete sequenceinsertion sequence transposase protein9e-1478.2
NC_017244:529500:534022534022534609588Brucella melitensis M28 chromosome chromosome 1, complete sequenceinsertion sequence transposase protein9e-1478.2
NC_017246:528825:534269534269534856588Brucella melitensis M5-90 chromosome chromosome I, completeinsertion sequence transposase protein9e-1478.2
NC_007618:526400:531844531844532431588Brucella melitensis biovar Abortus 2308 chromosome I, completeBacterial regulatory protein LacI, HTH motif9e-1478.2
NC_010103:507482:512568512568513155588Brucella canis ATCC 23365 chromosome I, complete sequenceinsertion sequence transposase protein8e-1478.2
NC_010169:527500:531917531917532860944Brucella suis ATCC 23445 chromosome I, complete sequencetransposase for insertion sequence element IS65011e-1377.8
NC_015857:531314:535385535385536328944Brucella pinnipedialis B2/94 chromosome chromosome 1, completeISBm3 transposase1e-1377.8
NC_004310:508483:513927513927514870944Brucella suis 1330 chromosome I, complete sequenceISBm3, transposase, programmed frameshift1e-1377.8
NC_017248:529500:534131534131534670540Brucella melitensis NI chromosome chromosome I, complete sequenceinsertion sequence transposase protein1e-1377.8
NC_020063:2449554:2459479245947924606211143Enterobacteriaceae bacterium strain FGI 57, complete genometransposase9e-1374.7
NC_017251:508469:514557514557514856300Brucella suis 1330 chromosome I, complete genometransposase6e-1272
NC_017246:528825:534913534913535212300Brucella melitensis M5-90 chromosome chromosome I, completeinsertion sequence transposase protein6e-1272
NC_017244:529500:534666534666534965300Brucella melitensis M28 chromosome chromosome 1, complete sequencetransposase for insertion sequence element IS65016e-1272
NC_016797:508414:514502514502514801300Brucella suis VBI22 chromosome I, complete sequencetransposase6e-1272
NC_012441:529500:534681534681534980300Brucella melitensis ATCC 23457 chromosome I, complete sequenceinsertion sequence transposase protein6e-1272
NC_010103:507482:513212513212513511300Brucella canis ATCC 23365 chromosome I, complete sequenceinsertion sequence transposase protein6e-1272
NC_010617:1910388:1916599191659919180261428Kocuria rhizophila DC2201, complete genomeputative transposase8e-1271.6
NC_010511:2775465:279368327936832794645963Methylobacterium sp. 4-46 chromosome, complete genomeintegrase catalytic subunit1e-1171.2
AC_000091:273325:2800532800532812071155Escherichia coli W3110 DNA, complete genomepredicted DNA-binding transcriptional regulator2e-1170.1
NC_000913:272071:2800532800532812071155Escherichia coli K12, complete genomeCP4-6 prophage; predicted DNA-binding transcriptional regulator2e-1170.1
NC_010473:247429:2541572541572553111155Escherichia coli str. K-12 substr. DH10B, complete genomeCP4-6 prophage; predicted DNA-binding transcriptional regulator2e-1170.1
NC_013037:2364514:238652723865272387504978Dyadobacter fermentans DSM 18053, complete genomeIntegrase catalytic region3e-1169.7
NC_010511:6067000:613948961394896140451963Methylobacterium sp. 4-46 chromosome, complete genomeintegrase catalytic subunit4e-1169.3
NC_010511:3674178:373184337318433732805963Methylobacterium sp. 4-46 chromosome, complete genomeintegrase catalytic subunit4e-1169.3
NC_013037:578000:590178590178591155978Dyadobacter fermentans DSM 18053, complete genomeIntegrase catalytic region4e-1169.3
NC_003155:4592000:4623466462346646252351770Streptomyces avermitilis MA-4680, complete genomeISmav2-like transposase6e-1168.6
NC_008726:610000:6138536138536156461794Mycobacterium vanbaalenii PYR-1, complete genomeIntegrase, catalytic region1e-1067.4
NC_013169:87269:101465101465101695231Kytococcus sedentarius DSM 20547, complete genome7e-1065.1
NC_003888:56225:798397983980690852Streptomyces coelicolor A3(2), complete genomenoncomposite transposon transposase7e-1065.1
NC_008726:494769:4993164993165003321017Mycobacterium vanbaalenii PYR-1, complete genomeIntegrase, catalytic region2e-0963.5
NC_013235:1761539:1766259176625917680821824Nakamurella multipartita DSM 44233, complete genomeIntegrase catalytic region3e-0963.2
NC_015957:196000:199676199676200110435Streptomyces violaceusniger Tu 4113 chromosome, complete genome3e-0963.2
NC_017075:1837966:1842942184294218440541113Rubrivivax gelatinosus IL144, complete genomeputative transposase5e-0962.4
NC_009454:1577319:163881816388181639744927Pelotomaculum thermopropionicum SI, complete genometransposase and inactivated derivatives6e-0962
NC_006087:2326143:234629623462962346757462Leifsonia xyli subsp. xyli str. CTCB07, complete genome2e-0860.5
NC_006087:28490:355603556036021462Leifsonia xyli subsp. xyli str. CTCB07, complete genome2e-0860.5
NC_006087:345976:384942384942385403462Leifsonia xyli subsp. xyli str. CTCB07, complete genome2e-0860.5
NC_006087:28490:437174371744178462Leifsonia xyli subsp. xyli str. CTCB07, complete genometransposase, ISlxx42e-0860.5
NC_017075:2689014:269190626919062692403498Rubrivivax gelatinosus IL144, complete genome3e-0859.7
NC_011894:6516856:654590465459046546884981Methylobacterium nodulans ORS 2060, complete genomeIntegrase catalytic region4e-0859.3
NC_006087:237500:243750243750244211462Leifsonia xyli subsp. xyli str. CTCB07, complete genome5e-0858.9
NC_015259:734795:7421037421037431491047Polymorphum gilvum SL003B-26A1 chromosome, complete genomeIntegrase, catalytic region1e-0758.2
NC_015259:673662:7146567146567157021047Polymorphum gilvum SL003B-26A1 chromosome, complete genomeIntegrase, catalytic region1e-0758.2
NC_015259:2757081:276548227654822766474993Polymorphum gilvum SL003B-26A1 chromosome, complete genomeIntegrase, catalytic region9e-0858.2
NC_019673:8161242:818247781824778182881405Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein9e-0858.2
NC_010842:2310756:233890523389052339357453Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)' chromosome2e-0757
NC_010602:2244729:233351823335182333970453Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'putative transposase2e-0757
NC_007406:3354000:3358275335827533597141440Nitrobacter winogradskyi Nb-255, complete genomehelix-turn-helix, Fis-type5e-0755.8
NC_009049:2131017:214060021406002141421822Rhodobacter sphaeroides ATCC 17029 chromosome 1, complete sequenceIntegrase, catalytic region6e-0755.5
NC_012856:1080000:108013410801341080964831Ralstonia pickettii 12D chromosome 1, complete genomeIntegrase catalytic region6e-0755.5
NC_007406:2615916:263012026301202631100981Nitrobacter winogradskyi Nb-255, complete genomehelix-turn-helix, Fis-type8e-0755.1
NC_007406:3354000:336502033650203366000981Nitrobacter winogradskyi Nb-255, complete genomehelix-turn-helix, Fis-type8e-0755.1
NC_010717:4787750:480498148049814805682702Xanthomonas oryzae pv. oryzae PXO99A, complete genomeintegrase core domain protein8e-0755.1
NC_007406:3354000:337026533702653371245981Nitrobacter winogradskyi Nb-255, complete genomehelix-turn-helix, Fis-type1e-0654.3
NC_014935:769305:780338780338781153816Nitratifractor saLSUginis DSM 16511 chromosome, complete genomeintegrase catalytic region2e-0653.9
NC_011386:931140:952707952707953687981Oligotropha carboxidovorans OM5, complete genomeintegrase, catalytic region2e-0653.9
NC_015684:3157941:317076931707693171749981Oligotropha carboxidovorans OM5 chromosome, complete genometransposase2e-0653.9
NC_007406:857625:871679871679872392714Nitrobacter winogradskyi Nb-255, complete genomeintegrase, catalytic region2e-0653.9
NC_012803:1980955:199243219924321993382951Micrococcus luteus NCTC 2665, complete genomehypothetical protein3e-0653.1
NC_007498:1611986:1620926162092616219361011Pelobacter carbinolicus DSM 2380, complete genomeputative integrase3e-0653.1
NC_017223:51180:704417044171259819Bordetella pertussis CS chromosome, complete genome4e-0652.8
NC_002929:52500:704417044171259819Bordetella pertussis Tohama I, complete genome4e-0652.8
NC_009078:510525:530315530315530869555Burkholderia pseudomallei 1106a chromosome II, complete sequenceintegrase core domain protein5e-0652.4
NC_013730:2751484:276202027620202762994975Spirosoma linguale DSM 74, complete genomeIntegrase catalytic region5e-0652.4
NC_013730:3208571:322505632250563226030975Spirosoma linguale DSM 74, complete genomeIntegrase catalytic region5e-0652.4
NC_013730:2751484:276381327638132764787975Spirosoma linguale DSM 74, complete genomeIntegrase catalytic region5e-0652.4
NC_017033:1672313:168350916835091684333825Frateuria aurantia DSM 6220 chromosome, complete genometransposase5e-0652.4
NC_017033:2081206:208842520884252089249825Frateuria aurantia DSM 6220 chromosome, complete genometransposase5e-0652.4
NC_019673:3041936:305057430505743050786213Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein4e-0652.4
NC_006351:520500:549075549075549788714Burkholderia pseudomallei K96243 chromosome 2, complete sequenceinsertion element hypothetical protein7e-0652
NC_007435:2352954:236900423690042369693690Burkholderia pseudomallei 1710b chromosome II, complete sequenceIntegrase core domain protein6e-0652
NC_011145:4628000:4628244462824446294431200Anaeromyxobacter sp. K, complete genomeIntegrase catalytic region6e-0652
NC_021150:3416450:3428651342865134297961146Azotobacter vinelandii CA6, complete genometransposase6e-0652
NC_006087:676318:682365682365682730366Leifsonia xyli subsp. xyli str. CTCB07, complete genome6e-0652
NC_012560:3416451:3428652342865234297971146Azotobacter vinelandii DJ, complete genometransposase6e-0652
NC_006087:1483761:149153914915391491904366Leifsonia xyli subsp. xyli str. CTCB07, complete genome6e-0652
NC_007498:1562270:1579125157912515801351011Pelobacter carbinolicus DSM 2380, complete genometransposase and inactivated derivatives9e-0651.6