Pre_GI Gene

Some Help

Host: NC_010717 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010717:4787750 Xanthomonas oryzae pv. oryzae PXO99A, complete genome

Host Lineage: Xanthomonas oryzae; Xanthomonas; Xanthomonadaceae; Xanthomonadales; Proteobacteria; Bacteria

General Information: This strain is a representative strain of race 6 isolated in the Philippines. This plant pathogen affects rice plants by causing leaf blight, a major problem in Asian countries where rice production occurs on an industrial scale. This organism enters the xylem and spreads throughout the vascular tissue of the plant, which results in wilting of the plant, or to leaf blight if the infection occurs later in development. This genus consists of plant-specific yellow-pigmented microbes, some of which are economically important phytopathogens that devastate crops such as citrus plants, rice, beans, grape, and cotton. These organisms are almost exclusively found associated with their plant hosts and are not found free in the soil. Xanthomonas oryzae contains two pathovars which cause enconomically significant diseases in rice. Xanthomonas oryzae pathovar oryzae causes bacterial leaf blight which is one of the most serious diseases of rice. This disease is common in temperate and tropical areas and can cause significant crop loss.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
478775047887661017ISXo5 transposaseQuickGO ontologyBLASTP
47887634788957195Rhs family proteinQuickGO ontologyBLASTP
47894174790385969IS1112 transposaseQuickGO ontologyBLASTP
479040747925392133filamentous haemagglutinin N-terminalAdhesin HecA 20-residue repeat x2QuickGO ontologyBLASTP
47928604793639780ISxac3 transposaseQuickGO ontologyBLASTP
47937024793974273ISxac3 transposaseQuickGO ontologyBLASTP
47939734794086114hypothetical protein
47970404797390351radical SAM domain proteinQuickGO ontologyBLASTP
47988304799168339hypothetical proteinBLASTP
480021948014961278putative secretion proteinQuickGO ontologyBLASTP
480149348034962004ABC transporter ATP-binding proteinQuickGO ontologyBLASTP
48038614804559699TPR repeatQuickGO ontology
48046234804997375transposaseQuickGO ontologyBLASTP
48049814805682702integrase core domain proteinQuickGO ontologyBLASTP
48057914806084294transposase IS3QuickGO ontologyBLASTP
48061294806941813putative transposaseQuickGO ontologyBLASTP
48069794807125147ISXoo9 transposase orfBQuickGO ontologyBLASTP
48071434807415273ISxac3 transposaseQuickGO ontologyBLASTP
48074764807631156filamentous haemagglutininQuickGO ontologyBLASTP
480806448092991236ISXoo13 transposaseQuickGO ontologyBLASTP
480938748119602574filamentous haemagglutininQuickGO ontologyBLASTP
48122384812369132hypothetical protein
4812409482298910581filamentous haemagglutinin haemagglutination activity domain proteinQuickGO ontologyBLASTP