Pre_GI Gene

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Host: NC_010399 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010399:13222 Clavibacter michiganensis subsp. sepedonicus plasmid pCS1, complete

Host Lineage: Clavibacter michiganensis; Clavibacter; Microbacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism was first described and classified in 1914 as "Bacterium sepedonicus" and is considered a major plant pathogen. It is a phytopathogenic actinomycete that causes wilt and tuber rot in potato, which is a plant vascular disease with very high bacterial titers. Pathogenicity is believed to be associated with the presence of two plasmids, pCSL1 and pCSL2.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
11543132251683hypothetical proteinBLASTP
13222147931572putative ATPGTP-binding proteinQuickGO ontologyBLASTP
14808159111104putative lipoproteinQuickGO ontologyBLASTP
1590816363456putative lipoproteinQuickGO ontology
1635716881525hypothetical protein
1687817651774hypothetical proteinBLASTP
1767318236564hypothetical protein
1824719209963putative integraseQuickGO ontologyBLASTP
1952320227705hypothetical proteinBLASTP
2027821147870pat1 proteinQuickGO ontologyBLASTP
2117221558387hypothetical protein
2168021826147hypothetical protein
2181122260450hypothetical protein
22265239611697BLASTP
2288123843963putative transposaseQuickGO ontologyBLASTP
2415324380228hypothetical protein
2462625210585hypothetical protein
2537225560189hypothetical protein
2558525686102hypothetical protein
2597326446474hypothetical proteinBLASTP
2642426897474hypothetical proteinBLASTP
2705027406357hypothetical proteinBLASTP
2740327663261hypothetical protein
27895289051011hypothetical proteinBLASTP
2963230261630pat1 proteinQuickGO ontologyBLASTP
3030430429126hypothetical protein
3072131047327hypothetical proteinBLASTP
3104931438390hypothetical protein
3153131785255hypothetical protein
3181332307495hypothetical protein
3235732800444hypothetical protein
3289933282384putative DNA-binding proteinQuickGO ontologyBLASTP
3329033736447hypothetical protein
3385834067210hypothetical protein
3409334674582cell filamentation proteinQuickGO ontologyBLASTP
3465334934282hypothetical protein
3493635271336