Pre_GI: BLASTP Hits

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Query: NC_006155:2208686:2230727 Yersinia pseudotuberculosis IP 32953, complete genome

Start: 2230727, End: 2231893, Length: 1167

Host Lineage: Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is a fully virulent serotype I strain isolated from a human patient. Environmental bacterium that causes gastrointestinal disease. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This organism was first isolated in 1883 by Malassez and Vignal and is termed pseudotuberculosis since it causes lesions in the lung that are similar to those observed during tuberculosis infection. It is ubiquitous in the environment and is a food and waterborne pathogen that affects animals as well as humans by causing gastroenteritis like Yersinia enterocolitica.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010634:2124185:2147051214705121482171167Yersinia pseudotuberculosis PB1/+, complete genomeOrn/DAP/Arg decarboxylase 20805
NC_007516:2277910:2311864231186423130721209Synechococcus sp. CC9605, complete genomepossible diaminopimelate decarboxylase1e-51204
NC_013665:849508:8517548517548530341281Methanocella paludicola SANAE, complete genomediaminopimelate decarboxylase4e-24112
NC_016937:24654:2586025860271131254Francisella tularensis subsp. tularensis TI0902 chromosome,diaminopimelate decarboxylase2e-23110
NC_016933:24654:2586025860271131254Francisella tularensis TIGB03 chromosome, complete genomediaminopimelate decarboxylase2e-23110
NC_008245:24652:2585825858271111254Francisella tularensis subsp. tularensis FSC 198, complete genomediaminopimelate decarboxylase2e-23110
NC_006570:24636:2584225842270951254Francisella tularensis subsp. tularensis Schu 4, complete genomediaminopimelate decarboxylase2e-23110
NC_010677:96470:9767697676989291254Francisella tularensis subsp. mediasiatica FSC147, complete genomediaminopimelate decarboxylase2e-23110
NC_014212:319815:3210983210983222821185Meiothermus silvanus DSM 9946 chromosome, complete genomediaminopimelate decarboxylase4e-23109
NC_014166:401815:4110184110184122261209Arcobacter nitrofigilis DSM 7299 chromosome, complete genomediaminopimelate decarboxylase5e-23108
NC_015160:136055:1406781406781419161239Odoribacter splanchnicus DSM 20712 chromosome, complete genomeDiaminopimelate decarboxylase7e-23108
NC_009257:109528:1107341107341119871254Francisella tularensis subsp. tularensis WY96-3418 chromosome,diaminopimelate decarboxylase1e-22107
NC_015185:875324:8795318795318808861356Desulfurobacterium thermolithotrophum DSM 11699 chromosome,diaminopimelate decarboxylase2e-22107
NC_013939:212331:2158662158662171191254Deferribacter desulfuricans SSM1, complete genomediaminopimelate decarboxylase2e-22106
NC_002939:173833:1761591761591774121254Geobacter sulfurreducens PCA, complete genomediaminopimelate decarboxylase9e-22104
NC_015581:128350:1478181478181490771260Thioalkalimicrobium cyclicum ALM1 chromosome, complete genomediaminopimelate decarboxylase1e-21104
NC_014836:33278:5104951049522931245Desulfurispirillum indicum S5 chromosome, complete genomediaminopimelate decarboxylase2e-21103
NC_014926:875948:8960948960948974461353Thermovibrio ammonificans HB-1 chromosome, complete genomeOrn/DAP/Arg decarboxylase 24e-2099.4
NC_016629:3308329:3348954334895433502161263Desulfovibrio africanus str. Walvis Bay chromosome, completediaminopimelate decarboxylase4e-2099.4
NC_008340:116491:1424291424291436641236Alkalilimnicola ehrlichei MLHE-1, complete genomeOrn/DAP/Arg decarboxylase 28e-2098.2
NC_009975:1374500:1374732137473213760421311Methanococcus maripaludis C6, complete genomediaminopimelate decarboxylase3e-1996.7
UCMB5137:1834999:1846666184666618479851320Bacillus atrophaeus UCMB-5137diaminopimelate decarboxylase3e-1996.3
NC_016593:2370000:2383260238326023845791320Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completediaminopimelate decarboxylase7e-1995.1
NC_015975:923812:9264739264739277801308Lactobacillus ruminis ATCC 27782 chromosome, complete genomeDiaminopimelate decarboxylase9e-1994.7
NC_017068:1788235:1809738180973818109881251Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative decarboxylase1e-1894.4
NC_007514:1475323:1497068149706814983241257Chlorobium chlorochromatii CaD3, complete genomeDiaminopimelate decarboxylase2e-1894
NC_007298:219783:2224842224842237461263Dechloromonas aromatica RCB, complete genomeDiaminopimelate decarboxylase2e-1893.6
NC_015847:1261276:1273909127390912752191311Methanococcus maripaludis XI chromosome, complete genomediaminopimelate decarboxylase3e-1893.2
NC_005791:1173000:1186534118653411878441311Methanococcus maripaludis S2, complete genomeDiaminopimelate decarboxylase3e-1893.2
NC_009135:330628:3510543510543523641311Methanococcus maripaludis C5, complete genomediaminopimelate decarboxylase3e-1892.8
NC_002937:1706000:1726001172600117272391239Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completediaminopimelate decarboxylase8e-1891.7
NC_008751:1736512:1741018174101817422561239Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomediaminopimelate decarboxylase9e-1891.7
NC_016830:6589575:6589575658957565908221248Pseudomonas fluorescens F113 chromosome, complete genomeprotein LysA1e-1791.3
NC_015318:249445:2684242684242696621239Hippea maritima DSM 10411 chromosome, complete genomediaminopimelate decarboxylase2e-1790.5
NC_013943:2610902:2621004262100426222631260Denitrovibrio acetiphilus DSM 12809 chromosome, complete genomediaminopimelate decarboxylase2e-1790.5
NC_009637:438037:4559814559814572911311Methanococcus maripaludis C7 chromosome, complete genomediaminopimelate decarboxylase2e-1790.1
NC_014500:4691915:4713410471341047147321323Dickeya dadantii 3937 chromosome, complete genomediaminopimelate decarboxylase2e-1790.1
NC_014624:1675500:1686982168698216882051224Eubacterium limosum KIST612 chromosome, complete genomeputative pyridoxal-dependent decarboxylase3e-1790.1
NC_009254:329700:3441203441203453281209Burkholderia vietnamiensis G4 chromosome 3, complete sequenceOrn/DAP/Arg decarboxylase 23e-1790.1
NC_009465:90000:1170621170621183031242Candidatus Vesicomyosocius okutanii HA, complete genomediaminopimelate decarboxylase3e-1790.1
NC_009634:547995:5668635668635681731311Methanococcus vannielii SB chromosome, complete genomediaminopimelate decarboxylase3e-1789.7
NC_014976:403919:4160984160984174171320Bacillus subtilis BSn5 chromosome, complete genomediaminopimelate decarboxylase3e-1789.7
NC_020209:4549563:4549563454956345508101248Pseudomonas poae RE*1-1-14, complete genomediaminopimelate decarboxylase4e-1789.4
NC_011992:717107:7233087233087246031296Acidovorax ebreus TPSY, complete genomediaminopimelate decarboxylase6e-1789
NC_015957:4963500:4974862497486249762561395Streptomyces violaceusniger Tu 4113 chromosome, complete genomeOrn/DAP/Arg decarboxylase 27e-1788.6
NC_017195:2273216:2285644228564422869631320Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completediaminopimelate decarboxylase7e-1788.6
NC_011901:39215:4156241562428061245Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completediaminopimelate decarboxylase8e-1788.6
NC_008782:752686:7567377567377580321296Acidovorax sp. JS42, complete genomediaminopimelate decarboxylase1e-1688.2
NC_015422:704500:7484767484767496811206Alicycliphilus denitrificans K601 chromosome, complete genomepyridoxal-dependent decarboxylase9e-1788.2
NC_003155:3652587:3652587365258736539781392Streptomyces avermitilis MA-4680, complete genomediaminopimelate decarboxylase2e-1687.4
NC_013093:3768790:3771068377106837723811314Actinosynnema mirum DSM 43827, complete genomediaminopimelate decarboxylase2e-1687
NC_013510:4484000:4485471448547144868561386Thermomonospora curvata DSM 43183, complete genomediaminopimelate decarboxylase2e-1687
NC_015975:99500:1060711060711073211251Lactobacillus ruminis ATCC 27782 chromosome, complete genomeDiaminopimelate decarboxylase3e-1686.7
NC_003551:415803:4428174428174440341218Methanopyrus kandleri AV19, complete genomeDiaminopimelate decarboxylase3e-1686.7
NC_015978:32875:5607156071573661296Lactobacillus sanfranciscensis TMW 1.1304 chromosome, completeDiaminopimelate decarboxylase3e-1686.3
NC_008789:1669082:1704702170470217059371236Halorhodospira halophila SL1, complete genomeOrn/DAP/Arg decarboxylase 26e-1685.5
NC_006513:2526843:2538130253813025393801251Azoarcus sp. EbN1, complete genomeornithine/diaminopimelate/arginine decarboxylase,family 21e-1584.3
NC_013929:3299736:3301424330142433028151392Streptomyces scabiei 87.22 chromosome, complete genomediaminopimelate decarboxylase1e-1584.3
NC_008526:74500:9100891008923541347Lactobacillus casei ATCC 334, complete genomeDiaminopimelate decarboxylase2e-1584
NC_015589:2941953:2946647294664729478581212Desulfotomaculum ruminis DSM 2154 chromosome, complete genomediaminopimelate decarboxylase5e-1582.4
NC_016616:1233555:1235606123560612368621257Dechlorosoma suillum PS chromosome, complete genomediaminopimelate decarboxylase5e-1582.4
NC_016605:132253:1543441543441556361293Pediococcus claussenii ATCC BAA-344 chromosome, complete genomediaminopimelate decarboxylase7e-1582
NC_015596:1556007:1585239158523915864651227Sinorhizobium meliloti AK83 chromosome 2, complete sequencepyridoxal-dependent decarboxylase exosortase system type 1 protein8e-1581.6
NC_008011:663958:6816266816266828911266Lawsonia intracellularis PHE/MN1-00, complete genomeDiaminopimelate decarboxylase2e-1480.9
NC_008312:3728329:3751594375159437530211428Trichodesmium erythraeum IMS101, complete genomediaminopimelate decarboxylase1e-1480.9
NC_015152:389500:3968173968173980191203Spirochaeta sp. Buddy chromosome, complete genomediaminopimelate decarboxylase2e-1480.5
NC_002947:5961096:5961096596109659623431248Pseudomonas putida KT2440, complete genomediaminopimelate decarboxylase2e-1480.5
NC_016582:4874500:4878729487872948801201392Streptomyces bingchenggensis BCW-1 chromosome, complete genomediaminopimelate decarboxylase2e-1480.1
NC_007484:2222474:2243015224301522442471233Nitrosococcus oceani ATCC 19707, complete genomeOrn/DAP/Arg decarboxylase 22e-1480.1
NC_014314:576465:6631316631316644441314Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completediaminopimelate decarboxylase3e-1480.1
NC_016112:3103716:3103716310371631049511236Methylomicrobium alcaliphilum chromosome, complete genomeornithine/diaminopimelate PLP-dependent decarboxylase3e-1480.1
NC_011769:787496:8013358013358027591425Desulfovibrio vulgaris str. 'Miyazaki F', complete genomeOrn/DAP/Arg decarboxylase 24e-1479.3
NC_008781:708811:7105697105697118551287Polaromonas naphthalenivorans CJ2, complete genomediaminopimelate decarboxylase1e-1378.2
NC_002578:828000:8357428357428369501209Thermoplasma acidophilum DSM 1728, complete genomeDiaminopimelate decarboxylase9e-1478.2
NC_019815:589762:5903905903905916581269Candidatus Kinetoplastibacterium crithidii (ex Angomonas deaneidiaminopimelate decarboxylase1e-1377.8
NC_015499:119200:1571581571581584411284Thermodesulfobium narugense DSM 14796 chromosome, complete genomediaminopimelate decarboxylase1e-1377.8
NC_013730:296312:3010463010463023201275Spirosoma linguale DSM 74, complete genomediaminopimelate decarboxylase1e-1377.4
NC_016814:18000:2955529555307751221Sinorhizobium fredii HH103 plasmid pSfHH103c complete sequenceOrnithine decarboxylase ODC2e-1377
NC_009380:4184695:4184695418469541861071413Salinispora tropica CNB-440 chromosome, complete genomediaminopimelate decarboxylase2e-1377
NC_009712:1008000:1028815102881510300081194Candidatus Methanoregula boonei 6A8, complete genomeOrn/DAP/Arg decarboxylase 21e-1274.7
NC_020299:764526:7674077674077686691263Candidatus Kinetoplastibacterium oncopeltii TCC290E, completediaminopimelate decarboxylase1e-1274.3
NC_008261:676000:6904856904856917801296Clostridium perfringens ATCC 13124, complete genomediaminopimelate decarboxylase2e-1273.6
NC_003366:728859:7430707430707444701401Clostridium perfringens str. 13, complete genomediaminopimelate decarboxylase2e-1273.6
NC_007614:620500:6238686238686251241257Nitrosospira multiformis ATCC 25196 chromosome 1, completediaminopimelate decarboxylase3e-1273.2
NC_008262:654000:6687356687356700301296Clostridium perfringens SM101, complete genomediaminopimelate decarboxylase4e-1272.8
NC_016012:104500:1227071227071239871281Candidatus Arthromitus sp. SFB-rat-Yit, complete genomediaminopimelate decarboxylase, lisA8e-1271.6
NC_008702:3580380:3580380358038035816631284Azoarcus sp. BH72, complete genomeprobable diaminopimelate decarboxylase1e-1171.6
NC_017317:944218:9626509626509639811332Corynebacterium ulcerans 809 chromosome, complete genomediaminopimelate decarboxylase1e-1170.9
NC_015500:2329957:2356632235663223578041173Treponema brennaborense DSM 12168 chromosome, complete genomeOrnithine decarboxylase2e-1170.5
NC_011565:620801:6447286447286458761149Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2,diaminopimelate decarboxylase3e-1170.1
NC_015222:983647:9986819986819998561176Nitrosomonas sp. AL212 chromosome, complete genomeOrnithine decarboxylase2e-1170.1
NC_015458:2998000:3021231302123130224931263Pusillimonas sp. T7-7 chromosome, complete genomediaminopimelate decarboxylase4e-1169.3
NC_015683:947048:9654819654819668121332Corynebacterium ulcerans BR-AD22 chromosome, complete genomeDiaminopimelate decarboxylase6e-1168.9
NC_018645:2690325:2705266270526627065281263Desulfobacula toluolica Tol2, complete genomepyridoxal-dependent decarboxylase, exosortase system type1 associated6e-1168.9
NC_016932:832748:8715048715048728351332Corynebacterium pseudotuberculosis 316 chromosome, complete genomediaminopimelate decarboxylase8e-1168.6
NC_020300:1241968:1256325125632512574581134Bartonella australis Aust/NH1, complete genomeornithine decarboxylase9e-1168.2
NC_017031:863093:8832338832338846571425Corynebacterium pseudotuberculosis P54B96 chromosome, completediaminopimelate decarboxylase2e-1067.4
NC_017301:863500:8830108830108843411332Corynebacterium pseudotuberculosis C231 chromosome, completediaminopimelate decarboxylase2e-1067.4
NC_017303:863060:8832038832038845341332Corynebacterium pseudotuberculosis I19 chromosome, complete genomediaminopimelate decarboxylase2e-1067.4
NC_017305:863072:8832158832158845461332Corynebacterium pseudotuberculosis PAT10 chromosome, completediaminopimelate decarboxylase2e-1067.4
NC_019814:125611:1283181283181295231206Candidatus Kinetoplastibacterium blastocrithidii (ex Strigomonasdiaminopimelate decarboxylase2e-1067.4
NC_014370:1117283:1123698112369811248851188Prevotella melaninogenica ATCC 25845 chromosome chromosome I,pyridoxal-dependent decarboxylase, pyridoxal binding domain protein3e-1066.6
NC_008825:3298506:3316887331688733181611275Methylibium petroleiphilum PM1, complete genomeputative diaminopimelate decarboxylase protein3e-1066.6
NC_006087:676318:6859066859066873211416Leifsonia xyli subsp. xyli str. CTCB07, complete genomediaminopimelate decarboxylase4e-1066.2
NC_003919:3396136:3417751341775134203602610Xanthomonas axonopodis pv. citri str. 306, complete genomebifunctional aspartate kinase/diaminopimelate decarboxylase protein5e-1065.9
NC_003450:2244862:2255736225573622570251290Corynebacterium glutamicum ATCC 13032, complete genomediaminopimelate decarboxylase7e-1065.5
NC_006958:2214893:2225768222576822284222655Corynebacterium glutamicum ATCC 13032, complete genomedecarboxylase7e-1065.5
NC_009342:2211000:2219738221973822223922655Corynebacterium glutamicum R chromosome, complete genomehypothetical protein7e-1065.5
NC_016884:760000:7721777721777733101134Sulfobacillus acidophilus DSM 10332 chromosome, complete genomeOrn/DAP/Arg decarboxylase 26e-1065.5
NC_014329:844622:8833928833928847231332Corynebacterium pseudotuberculosis FRC41 chromosome, completediaminopimelate decarboxylase6e-1065.5
NC_016781:844613:8833838833838847141332Corynebacterium pseudotuberculosis 3/99-5 chromosome, completediaminopimelate decarboxylase6e-1065.5
NC_017300:863898:8832888832888846191332Corynebacterium pseudotuberculosis 1002 chromosome, completediaminopimelate decarboxylase6e-1065.5
NC_010003:570643:5827785827785839501173Petrotoga mobilis SJ95, complete genomeOrn/DAP/Arg decarboxylase 22e-0963.9
NC_005966:2699483:2708185270818527093451161Acinetobacter sp. ADP1, complete genomeputative ornithine decarboxylase4e-0962.8
NC_020389:1936000:1939344193934419406061263Methanosarcina mazei Tuc01, complete genomeDiaminopimelate decarboxylase9e-0961.6
NC_016751:2044379:2048690204869020498501161Marinitoga piezophila KA3 chromosome, complete genomediaminopimelate decarboxylase1e-0861.6
NC_014932:1232346:1276216127621612775771362Bartonella clarridgeiae 73, complete genomelysine/ornithine decarboxylase2e-0860.8
NC_013174:2712000:2723494272349427267123219Jonesia denitrificans DSM 20603, complete genomeOrn/DAP/Arg decarboxylase 24e-0859.7
NC_005955:1166521:1183759118375911848921134Bartonella quintana str. Toulouse, complete genomeOrnithine decarboxylase4e-0859.3
NC_005956:1402500:1420457142045714215901134Bartonella henselae str. Houston-1, complete genomeOrnithine decarboxylase6e-0858.9
NC_008783:1101973:1118676111867611198091134Bartonella bacilliformis KC583, complete genomepyridoxal-dependent decarboxylase2e-0757.4
NC_015577:3589884:3588722358872235898941173Treponema azotonutricium ZAS-9 chromosome, complete genomedecarboxylase, pyridoxal-dependent family2e-0757
NC_009718:731670:7488937488937500741182Fervidobacterium nodosum Rt17-B1, complete genomeOrn/DAP/Arg decarboxylase 24e-0756.2
NC_011653:1671910:1681382168138216825451164Thermosipho africanus TCF52B, complete genomeornithine decarboxylase5e-0755.8
NC_018876:307464:3262363262363274081173Methanolobus psychrophilus R15 chromosome, complete genomeornithine decarboxylase6e-0755.8
NC_007298:1759881:1769769176976917710191251Dechloromonas aromatica RCB, complete genomeDiaminopimelate decarboxylase8e-0755.1
NC_007517:2241104:2258867225886722601261260Geobacter metallireducens GS-15, complete genomeOrn/DAP/Arg decarboxylase 29e-0755.1
NC_020301:1342924:1361583136158313627161134Bartonella vinsonii subsp. berkhoffii str. Winnie, complete genomeornithine decarboxylase1e-0551.6