Pre_GI Gene

Some Help

Host: NC_007298 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_007298:219783 Dechloromonas aromatica RCB, complete genome

Host Lineage: Dechloromonas aromatica; Dechloromonas; Rhodocyclaceae; Rhodocyclales; Proteobacteria; Bacteria

General Information: This strain was enriched as a hydrocarbon-oxidizing chlorate-reducer from the Potomac River, Maryland, USA. This organism is the first one to have the capability of benzene oxidation in pure anaerobic culture by coupling it to nitrate reduction which is of importance due to the anaerobic environments often found in bioremediation projects. It can reduce perchlorate and chlorate to chloride. This organism may be used for bioremediation as it can oxidize aromatic hydrocarbon compounds, including benzene, in the absence of oxygen. Benzene is an important pollutant, and is used in many manufacturing processes and is a component of diesel fuel.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
219250219786537ATP-dependent protease peptidase subunitQuickGO ontologyBLASTP
2197832211231341ATP-dependent protease ATP-binding subunitQuickGO ontologyBLASTP
221228222115888Auxin Efflux CarrierQuickGO ontologyBLASTP
222110222478369RNA-binding S4QuickGO ontologyBLASTP
2224842237461263Diaminopimelate decarboxylaseQuickGO ontologyBLASTP
223946224263318Frataxin-likeQuickGO ontologyBLASTP
2242642265792316Penicillin-binding protein 1AQuickGO ontologyBLASTP
2267402278251086Type IV pilus assembly protein PilMQuickGO ontologyBLASTP
227822228391570Fimbrial assemblyQuickGO ontologyBLASTP
228388229071684Pilus assembly protein PilOQuickGO ontologyBLASTP
229068229613546Pilus assembly protein PilQQuickGO ontologyBLASTP
2296102317572148type II and III secretion system proteinNolW-likeSecretinTonB short N-terminalQuickGO ontologyBLASTP
231806232357552shikimate kinaseQuickGO ontologyBLASTP
23235423344810953-dehydroquinate synthaseQuickGO ontologyBLASTP
2336362382704635Glutamine amidotransferase class-IIGlutamate synthase alpha subunit C-terminalFerredoxin-dependent glutamate synthaseGlutamate synthase centralQuickGO ontologyBLASTP
2382702397361467Glutamate synthase NADHNADPH small subunit 1QuickGO ontologyBLASTP
239927240661735hypothetical proteinBLASTP
2407022420601359UDP-N-acetylglucosamine pyrophosphorylaseQuickGO ontologyBLASTP
242060242383324hypothetical protein
2424202444712052Small GTP-binding protein domainQuickGO ontologyBLASTP