Pre_GI Gene

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Host: NC_015978 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_015978:32875 Lactobacillus sanfranciscensis TMW 1.1304 chromosome, complete

Host Lineage: Lactobacillus sanfranciscensis; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: This is the characteristic organism in wheat sourdough. They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
31862328781017oligopeptide transport ATP-binding protein oppDQuickGO ontologyBLASTP
3287533843969oligopeptide transport ATP-binding protein oppFQuickGO ontologyBLASTP
3384634805960oligopeptide transport system permease oppBQuickGO ontologyBLASTP
3491435762849oligopeptide transport system permease oppCQuickGO ontologyBLASTP
35849376361788oligopeptide-binding protein oppAQuickGO ontologyBLASTP
37784403152532aminopeptidase NQuickGO ontologyBLASTP
45701470291329protonsodium-glutamate symport proteinQuickGO ontologyBLASTP
47064486291566hypothetical proteinBLASTP
48601498631263hypothetical proteinBLASTP
5033150852522hypothetical proteinBLASTP
5087851060183hypothetical protein
5133751657321hypothetical protein
5189352510618hypothetical proteinBLASTP
5259553185591hypothetical proteinBLASTP
5325054224975Diaminopimelate epimeraseQuickGO ontologyBLASTP
54239556091371putative aspartokinaseQuickGO ontologyBLASTP
56071573661296Diaminopimelate decarboxylaseQuickGO ontologyBLASTP