Pre_GI: BLASTP Hits

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Query: NC_004578:4432983:4452042 Pseudomonas syringae pv. tomato str. DC3000, complete genome

Start: 4452042, End: 4452668, Length: 627

Host Lineage: Pseudomonas syringae group genomosp. 3; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: While pathogenic on Arabidopsis thaliana, it is mainly characterized as causing bacterial speck disease on tomato plants, which has a large economic impact. This organism is mainly endophytic and is a poor colonizes of plant surfaces but can multiply within the host. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011770:2690501:2717258271725827185201263Pseudomonas aeruginosa LESB58, complete genomeportal protein5e-1994.4
NC_008261:1787345:1803526180352618047731248Clostridium perfringens ATCC 13124, complete genomephage portal protein, HK97 family4e-1891.7
NC_009674:2678932:2695671269567126969811311Bacillus cytotoxicus NVH 391-98 chromosome, complete genomeHK97 family phage portal protein1e-1790.1
NC_009633:4097536:4119807411980741210661260Alkaliphilus metalliredigens QYMF chromosome, complete genomeHK97 family phage portal protein1e-1789.7
NC_007712:1182518:1208027120802712093551329Sodalis glossinidius str. 'morsitans', complete genomephage portal protein1e-1789.7
NC_013892:671000:6829526829526841901239Xenorhabdus bovienii SS-2004 chromosome, complete genomeportal protein1e-1789.4
NC_014538:1598106:1620251162025116215071257Thermoanaerobacter sp. X513 chromosome, complete genomephage portal protein, HK97 family2e-1789
NC_010320:1268355:1292868129286812941301263Thermoanaerobacter sp. X514 chromosome, complete genomeHK97 family phage portal protein2e-1789
NC_014393:4775452:4801904480190448032651362Clostridium cellulovorans 743B chromosome, complete genomephage portal protein, HK97 family2e-1788.6
NC_009656:5297000:5301505530150553027431239Pseudomonas aeruginosa PA7 chromosome, complete genomeHK97 family phage portal protein9e-1786.7
NC_008346:2523289:253743325374332538110678Syntrophomonas wolfei subsp. wolfei str. Goettingen, completeportal protein, HK97 family, putative2e-1685.9
NC_016791:4038069:4060355406035540616111257Clostridium sp. BNL1100 chromosome, complete genomephage portal protein, HK97 family3e-1685.1
NC_014364:2670000:2682607268260726842231617Spirochaeta smaragdinae DSM 11293 chromosome, complete genomephage portal protein, HK97 family5e-1684.3
NC_015520:2974048:2984087298408729854091323Mahella australiensis 50-1 BON chromosome, complete genomephage portal protein, HK97 family4e-1581.3
NC_007434:1712000:1799308179930818005581251Burkholderia pseudomallei 1710b chromosome I, complete sequencephage portal protein, HK97 family4e-1581.3
NC_016627:4323370:4346649434664943479711323Clostridium clariflavum DSM 19732 chromosome, complete genomephage portal protein, HK97 family4e-1581.3
NC_016816:2953530:2955614295561429569181305Pantoea ananatis LMG 5342, complete genomeputative phage portal protein, HK97 family5e-1580.9
NC_014364:2111685:2139608213960821408491242Spirochaeta smaragdinae DSM 11293 chromosome, complete genomephage portal protein, HK97 family6e-1580.9
NC_018870:2316499:2346696234669623480181323Thermacetogenium phaeum DSM 12270 chromosome, complete genomephage portal protein, HK97 family7e-1580.5
NC_009012:1934107:1956610195661019579321323Clostridium thermocellum ATCC 27405, complete genomephage portal protein, HK97 family8e-1580.5
NC_016633:3069518:3092387309238730937151329Sphaerochaeta pleomorpha str. Grapes chromosome, complete genomephage portal protein, HK97 family1e-1480.1
NC_014410:800500:8160288160288173501323Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,phage portal protein, HK97 family1e-1479.7
NC_021184:4493440:4496274449627444975091236Desulfotomaculum gibsoniae DSM 7213, complete genomephage portal protein, HK97 family1e-1479.3
NC_011283:3379181:3398870339887034001291260Klebsiella pneumoniae 342 chromosome, complete genomephage portal protein, HK97 family3e-1478.6
NC_016612:3803130:3830760383076038319591200Klebsiella oxytoca KCTC 1686 chromosome, complete genomephage portal protein, HK97 family3e-1478.6
NC_015519:2489728:2518942251894225201981257Tepidanaerobacter sp. Re1 chromosome, complete genomephage portal protein, HK97 family4e-1478.2
NC_015520:3060495:3078964307896430814082445Mahella australiensis 50-1 BON chromosome, complete genomephage portal protein, HK97 family4e-1478.2
NC_013892:2005480:2013969201396920151921224Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein5e-1477.4
NC_011898:3367457:3389815338981533910591245Clostridium cellulolyticum H10, complete genomephage portal protein, HK97 family8e-1477
NC_014479:1961692:1975358197535819765901233Bacillus subtilis subsp. spizizenii str. W23 chromosome, completehypothetical protein1e-1376.3
NC_009706:2673906:2716013271601327172571245Clostridium kluyveri DSM 555 chromosome, complete genomePhage portal protein2e-1375.9
NC_012563:2925472:2943195294319529444451251Clostridium botulinum A2 str. Kyoto, complete genomephage portal protein, HK97 family3e-1375.1
NC_015697:506494:5261905261905274461257Lactobacillus reuteri SD2112 chromosome, complete genomeHK97 family portal protein3e-1375.1
NC_010520:1614333:1639595163959516408451251Clostridium botulinum A3 str. Loch Maree, complete genomephage portal protein, HK97 family5e-1374.3
NC_007929:785875:8079228079228091661245Lactobacillus salivarius subsp. salivarius UCC118, complete genomePortal protein7e-1373.9
NC_019960:1658657:1702738170273817039311194Prevotella dentalis DSM 3688 chromosome 1, complete sequencephage portal protein, HK97 family9e-1373.6
NC_006322:3418268:3449824344982434511341311Bacillus licheniformis ATCC 14580, complete genomehypothetical protein1e-1273.2
NC_006270:3418097:3449653344965334509631311Bacillus licheniformis ATCC 14580, complete genomehypothetical phagelike protein1e-1273.2
NC_017297:2017000:2030277203027720315271251Clostridium botulinum F str. 230613 chromosome, complete genomephage portal protein, HK97 family2e-1272.8
NC_009699:2017329:2030171203017120314031233Clostridium botulinum F str. Langeland chromosome, complete genomeHK97 family phage portal protein2e-1272.8
NC_015856:3912195:3934855393485539361051251Collimonas fungivorans Ter331 chromosome, complete genomephage portal protein, HK97 family2e-1272.4
NC_012563:2101449:2118838211883821200881251Clostridium botulinum A2 str. Kyoto, complete genomephage portal protein, HK97 family2e-1272.4
NC_014376:1879000:1880555188055518818201266Clostridium saccharolyticum WM1 chromosome, complete genomephage portal protein, HK97 family2e-1272
NC_014328:303063:3674483674483687281281Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative phage portal protein4e-1271.6
NC_015697:468234:4857444857444870091266Lactobacillus reuteri SD2112 chromosome, complete genomeHK97 family portal protein5e-1271.2
NC_016944:1621575:1623675162367516250001326Vibrio cholerae IEC224 chromosome I, complete sequencephage portal protein5e-1271.2
NC_007432:654904:6822006822006834891290Streptococcus agalactiae A909, complete genomeprophage LambdaSa04, portal protein, HK97 family5e-1270.9
NC_008530:1454118:1474513147451314757781266Lactobacillus gasseri ATCC 33323, complete genomehypothetical protein8e-1270.5
NC_014624:2878457:2881975288197528832341260Eubacterium limosum KIST612 chromosome, complete genomephage portal protein1e-1169.7
NC_016631:2112175:2137245213724521388971653Granulicella mallensis MP5ACTX8 chromosome, complete genomephage portal protein, HK97 family2e-1169.3
NC_011769:2016000:2033742203374220349681227Desulfovibrio vulgaris str. 'Miyazaki F', complete genomephage portal protein, HK97 family2e-1168.9
NC_014393:937000:9614029614029626761275Clostridium cellulovorans 743B chromosome, complete genomephage portal protein, HK97 family2e-1168.9
NC_020272:1311932:1340758134075813420381281Bacillus amyloliquefaciens IT-45, complete genomephage portal protein4e-1168.2
NC_016791:1341858:1348020134802013493001281Clostridium sp. BNL1100 chromosome, complete genomephage portal protein, HK97 family4e-1167.8
NC_014829:2915500:2927258292725829285081251Bacillus cellulosilyticus DSM 2522 chromosome, complete genomephage portal protein, HK97 family1e-1066.6
NC_015428:1544728:1571518157151815726661149Lactobacillus buchneri NRRL B-30929 chromosome, complete genomephage portal protein, HK97 family1e-1066.6
NC_009436:2776410:2802925280292528041511227Enterobacter sp. 638, complete genomeHK97 family phage portal protein1e-1066.6
NC_006087:2439252:2464711246471124659551245Leifsonia xyli subsp. xyli str. CTCB07, complete genomephage-related portal protein1e-1066.6
NC_011365:592256:6114626114626128081347Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomephage portal protein, HK97 family1e-1066.2
NC_011894:7421867:7420584742058474218701287Methylobacterium nodulans ORS 2060, complete genomephage portal protein, HK97 family2e-1065.9
NC_014831:8965:3077830778330272250Thermaerobacter marianensis DSM 12885 chromosome, complete genomephage portal protein, HK97 family3e-1065.1
NC_012563:1704345:1704345170434517056011257Clostridium botulinum A2 str. Kyoto, complete genomephage portal protein, HK97 family3e-1065.1
NC_014365:2843126:2841888284188828431291242Desulfarculus baarsii DSM 2075 chromosome, complete genomephage portal protein, HK97 family5e-1064.3
NC_010939:896500:9096079096079108391233Actinobacillus pleuropneumoniae serovar 7 str. AP76, completePortal protein (GP3)1e-0963.5
NC_020164:1677452:1694289169428916955601272Staphylococcus warneri SG1, complete genomeHK97 family phage portal protein1e-0963.2
UCMB5137:120656:1344681344681357481281Bacillus atrophaeus UCMB-5137Portal protein1e-0963.2
NC_014910:1501952:1506357150635715075501194Alicycliphilus denitrificans BC chromosome, complete genomephage portal protein, hk97 family2e-0962.4
NC_014150:1936154:1954561195456119558381278Brachyspira murdochii DSM 12563 chromosome, complete genomephage portal protein, HK97 family2e-0962.4
NC_014150:2560475:2579246257924625805231278Brachyspira murdochii DSM 12563 chromosome, complete genomephage portal protein, HK97 family2e-0962.4
NC_020260:1615135:1639203163920316404441242Cronobacter sakazakii Sp291, complete genomehypothetical protein3e-0962
NC_009778:1556222:1580690158069015819311242Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein3e-0962
NC_002952:1592000:1612713161271316139511239Staphylococcus aureus subsp. aureus MRSA252, complete genomeportal protein4e-0961.6
NC_003923:1533500:1552042155204215532801239Staphylococcus aureus subsp. aureus MW2, complete genomeportal protein4e-0961.6
NC_007795:1466318:1484769148476914860071239Staphylococcus aureus subsp. aureus NCTC 8325, complete genomephage portal protein, HK97 family4e-0961.6
NC_009487:1097500:1099496109949611007341239Staphylococcus aureus subsp. aureus JH9 chromosome, completeHK97 family phage portal protein4e-0961.6
NC_009632:1097379:1099370109937011006081239Staphylococcus aureus subsp. aureus JH1 chromosome, completeHK97 family phage portal protein4e-0961.6
NC_010079:1564327:1582778158277815840161239Staphylococcus aureus subsp. aureus USA300_TCH1516, completeportal protein3e-0961.6
NC_002953:998944:1003639100363910048771239Staphylococcus aureus subsp. aureus MSSA476, complete genomeportal protein3e-0961.6
NC_013450:2047000:2065507206550720667451239Staphylococcus aureus subsp. aureus ED98, complete genomephage portal protein, HK97 family3e-0961.6
NC_017338:1517723:1536173153617315374111239Staphylococcus aureus subsp. aureus JKD6159 chromosome, completephage portal protein3e-0961.6
NC_002951:351029:3759233759233771611239Staphylococcus aureus subsp. aureus COL, complete genomeprophage L54a, portal protein, HK97 family3e-0961.6
NC_017342:1765132:1769539176953917707771239Staphylococcus aureus subsp. aureus TCH60 chromosome, completeHK97 family phage portal protein3e-0961.6
NC_017351:1564469:1582005158200515832431239Staphylococcus aureus subsp. aureus 11819-97 chromosome, completephage portal protein, HK97 family3e-0961.6
NC_017337:321155:3445853445853456131029Staphylococcus aureus subsp. aureus ED133 chromosome, completeputative portal protein3e-0961.6
NC_017297:3428429:3445350344535034463781029Clostridium botulinum F str. 230613 chromosome, complete genomephage portal protein, HK97 family8e-0960.5
NC_009699:3429817:3446571344657134477641194Clostridium botulinum F str. Langeland chromosome, complete genomeHK97 family phage portal protein1e-0860.1
NC_010516:2676746:2693237269323726944211185Clostridium botulinum B1 str. Okra, complete genomephage portal protein, HK97 family1e-0860.1
NC_013892:3803278:3818935381893538201611227Xenorhabdus bovienii SS-2004 chromosome, complete genomePortal protein1e-0859.7
NC_013766:679906:6970686970686983031236Listeria monocytogenes 08-5578 chromosome, complete genomeportal protein2e-0859.3
NC_016052:1839763:1839763183976318409531191Tetragenococcus halophilus NBRC 12172, complete genomeputative portal protein2e-0859.3
NC_008751:1043269:1074075107407510753041230Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomephage portal protein, HK97 family2e-0858.9
NC_006270:1511000:1517509151750915188071299Bacillus licheniformis ATCC 14580, complete genomephage related putative head portal protein5e-0857.8
NC_006322:1507411:1518370151837015196681299Bacillus licheniformis ATCC 14580, complete genomehypothetical protein5e-0857.8
NC_007650:1192310:1219507121950712208891383Burkholderia thailandensis E264 chromosome II, complete sequencehead portal protein6e-0857.4
NC_018604:758819:7640137640137652451233Brachyspira pilosicoli WesB complete genomephage portal protein, HK97 family1e-0756.6
NC_016935:1636278:1663382166338216646471266Paenibacillus mucilaginosus 3016 chromosome, complete genomephage-related putative head portal protein1e-0756.6
NC_017190:852171:8694388694388706581221Bacillus amyloliquefaciens LL3 chromosome, complete genomephage portal protein GP31e-0756.2
NC_014551:865254:8853638853638865831221Bacillus amyloliquefaciens DSM 7, complete genomePhage portal protein GP31e-0756.2
NC_010086:810890:8323408323408336291290Burkholderia multivorans ATCC 17616 chromosome 2, completephage portal protein, HK97 family2e-0755.8
NC_014727:1220869:1242354124235412436371284Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,phage portal protein, hk97 family2e-0755.5
NC_015690:1186545:1213921121392112151861266Paenibacillus mucilaginosus KNP414 chromosome, complete genomephage related putative head portal protein4e-0754.7
NC_013411:597235:6162016162016174421242Geobacillus sp. Y412MC61, complete genomephage portal protein, HK97 family1e-0653.5
NC_014915:2963500:2986493298649329877341242Geobacillus sp. Y412MC52 chromosome, complete genomephage portal protein, HK97 family1e-0653.5
NC_015687:2025345:2042624204262420438831260Clostridium acetobutylicum DSM 1731 chromosome, complete genomePhage-related, head portal protein1e-0653.1
NC_003030:2023751:2041030204103020422891260Clostridium acetobutylicum ATCC 824, complete genomePhage-related, head portal protein1e-0653.1
NC_017295:2022085:2040437204043720415461110Clostridium acetobutylicum EA 2018 chromosome, complete genomephage-related, head portal protein1e-0653.1
NC_014330:1593000:1611091161109116123891299Brachyspira pilosicoli 95/1000 chromosome, complete genomeputative phage portal protein, HK97 family1e-0653.1
NC_011891:1437335:1452064145206414533771314Anaeromyxobacter dehalogenans 2CP-1, complete genomephage portal protein, HK97 family2e-0652.4
NC_014640:4293430:4319619431961943209051287Achromobacter xylosoxidans A8 chromosome, complete genomephage portal protein, HK97 family3e-0651.6