Pre_GI: BLASTP Hits

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Query: NC_003911:253400:275937 Silicibacter pomeroyi DSS-3, complete genome

Start: 275937, End: 276917, Length: 981

Host Lineage: Ruegeria pomeroyi; Ruegeria; Rhodobacteraceae; Rhodobacterales; Proteobacteria; Bacteria

General Information: Formerly Silicibacter pomeroyi, his marine bacterium is a member of the Roseobacter clade and was isolated off of the coast of Georgia in 1998. Dimethylsulfoniopropionate-degrading bacterium. Capable of degrading the organic sulfur compound DMSP (dimethylsulfoniopropionate) and can metabolize a number of sulfur compounds. DMSP is synthesized by marine algae and the degradation product dimethylsulfide contributes to the global sulfur cycle.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008573:195317:224184224184225119936Shewanella sp. ANA-3 plasmid 1, complete sequencetranscriptional regulator, AraC family2e-42172
NC_010505:4990472:501048450104845011467984Methylobacterium radiotolerans JCM 2831, complete genometranscriptional regulator, AraC family4e-30132
NC_014837:387868:409063409063410022960Pantoea sp. At-9b chromosome, complete genomeAraC family transcriptional regulator7e-29128
NC_014217:1352777:135437213543721355301930Starkeya novella DSM 506 chromosome, complete genometranscriptional regulator, AraC family4e-27122
NC_010682:1482365:149686514968651497827963Ralstonia pickettii 12J chromosome 1, complete sequencetranscriptional regulator, AraC family5e-27122
NC_016816:2508204:250921625092162510118903Pantoea ananatis LMG 5342, complete genomeAraC family transcriptional regulator6e-27121
NC_009921:5681677:569145556914555692393939Frankia sp. EAN1pec, complete genometranscriptional regulator, AraC family2e-26120
NC_008228:2295841:229770822977082298658951Pseudoalteromonas atlantica T6c, complete genometranscriptional regulator, AraC family1e-26120
NC_013956:1994970:201277120127712013718948Pantoea ananatis LMG 20103 chromosome, complete genomeYkgD3e-26119
NC_007511:1300978:132350113235011324469969Burkholderia sp. 383 chromosome 2, complete sequencetranscriptional regulator, AraC family1e-25117
NC_008702:1432952:1437635143763514386391005Azoarcus sp. BH72, complete genomeputative AraC-family transcriptional regulator2e-25116
NC_007912:4579873:459282945928294593707879Saccharophagus degradans 2-40, complete genomehistidine kinase3e-25115
NC_009921:6483660:6483660648366064847091050Frankia sp. EAN1pec, complete genometranscriptional regulator, AraC family6e-25115
NC_015136:912276:935323935323936282960Burkholderia sp. CCGE1001 chromosome 1, complete sequenceAraC family transcriptional regulator3e-24112
NC_020541:1827689:184194618419461842887942Rhodanobacter sp. 2APBS1, complete genomeDNA-binding domain-containing protein, AraC-type7e-23108
NC_014924:1701952:171627217162721717261990Pseudoxanthomonas suwonensis 11-1 chromosome, complete genometranscriptional regulator, AraC family8e-23107
NC_015458:2441435:244283324428332443741909Pusillimonas sp. T7-7 chromosome, complete genomeAraC family transcriptional regulator1e-22107
NC_008060:341851:346723346723347670948Burkholderia cenocepacia AU 1054 chromosome 1, complete sequencetranscriptional regulator, AraC family2e-21103
NC_011000:3493575:350804635080463508993948Burkholderia cenocepacia J2315 chromosome 1, complete sequenceAraC family regulatory protein2e-21103
NC_010170:4800000:489897248989724899928957Bordetella petrii, complete genometranscriptional regulator, AraC family1e-21103
NC_017986:5467279:546819554681955469016822Pseudomonas putida ND6 chromosome, complete genomeAraC family transcriptional regulator1e-21103
NC_009512:3068495:308791530879153088736822Pseudomonas putida F1, complete genomehelix-turn-helix- domain containing protein, AraC type1e-21103
NC_018524:5748421:5774695577469557758101116Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomebacterial regulatory helix-turn-helix s, AraC family protein4e-21102
NC_008313:1956500:196636819663681967324957Ralstonia eutropha H16 chromosome 1, complete sequencetranscriptional regulator, AraC-family7e-21101
NC_009659:1050532:109692610969261097882957Janthinobacterium sp. Marseille chromosome, complete genomeAraC family transcriptional regulator2e-2099.8
NC_014305:97055:1173921173921184141023Erwinia billingiae Eb661 plasmid pEB170, complete sequenceTranscriptional regulator, AraC family2e-2099.8
NC_009436:1679265:1685020168502016860421023Enterobacter sp. 638, complete genomeAraC family transcriptional regulator8e-2098.2
NC_015376:3320818:3324114332411433251301017Burkholderia gladioli BSR3 chromosome chromosome 2, completeAraC family transcriptional regulator4e-1995.9
NC_014618:57707:577075770758609903Enterobacter cloacae SCF1 chromosome, complete genomeAraC family transcriptional regulator2e-1893.2
NC_015381:3091500:3097693309769330986941002Burkholderia gladioli BSR3 chromosome 1, complete sequenceAraC family transcriptional regulator3e-1892.8
NC_011094:688626:702208702208703062855Salmonella enterica subsp. enterica serovar Schwarzengrund strtranscriptional regulator, AraC family protein8e-1891.3
NC_015566:5197624:521102552110255211780756Serratia sp. AS12 chromosome, complete genomeAraC family transcriptional regulator2e-1790.5
NC_011294:585500:598716598716599570855Salmonella enterica subsp. enterica serovar Enteritidis strAraC family transcriptional regulator2e-1790.1
NC_003197:606048:619258619258620112855Salmonella typhimurium LT2, complete genomeputative transcriptional regulator2e-1789.7
NC_006511:2251022:225478322547832255637855Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical araC-family transcriptional regulator2e-1789.7
NC_011083:654479:667688667688668542855Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,transcriptional regulator, AraC family protein2e-1789.7
NC_011147:2247460:224996722499672250821855Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein2e-1789.7
NC_011283:4438500:448024044802404481193954Klebsiella pneumoniae 342 chromosome, complete genomeAraC family transcriptional regulator2e-1789.7
NC_016810:604813:618746618746619600855Salmonella enterica subsp. enterica serovar Typhimurium straraC family transcriptional regulator2e-1789.7
NC_016856:606742:619952619952620806855Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative transcriptional regulator2e-1789.7
NC_016857:604792:618746618746619600855Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative transcriptional regulator2e-1789.7
NC_016860:644095:657305657305658159855Salmonella enterica subsp. enterica serovar Typhimurium strAraC family transcriptional regulator2e-1789.7
NC_016863:606742:619951619951620805855Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative transcriptional regulator2e-1789.7
NC_017046:604789:618743618743619597855Salmonella enterica subsp. enterica serovar Typhimurium str. 798araC-family transcriptional regulator2e-1789.7
NC_016831:2402893:240482724048272405681855Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative araC-family transcriptional regulator3e-1789.4
NC_011274:603901:617088617088617942855Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91AraC family transcriptional regulator3e-1789.4
NC_011080:610428:623665623665624519855Salmonella enterica subsp. enterica serovar Newport str. SL254,transcriptional regulator, AraC family protein3e-1789.4
NC_010676:3009980:301668130166813017520840Burkholderia phytofirmans PsJN chromosome 2, complete sequencetranscriptional regulator, AraC family6e-1788.6
NC_009832:5214850:522908252290825229855774Serratia proteamaculans 568, complete genometranscriptional regulator, AraC family6e-1788.6
NC_016832:2363136:236616223661622367016855Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein7e-1788.2
NC_003198:598000:610886610886611740855Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical araC-family transcriptional regulator7e-1788.2
NC_004631:2366335:236936123693612370215855Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical araC-family transcriptional regulator7e-1788.2
NC_011205:645591:664252664252665106855Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853AraC family transcriptional regulator9e-1787.8
NC_016109:3875617:387791638779163878857942Kitasatospora setae KM-6054, complete genomeputative AraC family transcriptional regulator1e-1687.8
NC_011149:588895:602131602131602985855Salmonella enterica subsp. enterica serovar Agona str. SL483,transcriptional regulator, AraC family protein2e-1687
NC_010102:2495441:249794824979482498802855Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-1686.7
NC_011365:1103927:111400311140031114950948Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeAraC family transcriptional regulator2e-1686.7
NC_013526:105195:1078841078841089061023Thermobaculum terrenum ATCC BAA-798 chromosome 2, complete genome2e-1686.3
NC_006905:651732:669410669410670264855Salmonella enterica subsp. enterica serovar Choleraesuis strputative transcriptional regulator (AraC/XylS family)4e-1685.9
NC_008268:7576365:758670675867067587590885Rhodococcus sp. RHA1, complete genometranscriptional regulator5e-1685.5
NC_013595:4951396:496187849618784962771894Streptosporangium roseum DSM 43021, complete genometranscriptional regulator, AraC family2e-1583.6
NC_015761:520858:533868533868534722855Salmonella bongori NCTC 12419, complete genomearaC family transcriptional regulator4e-1582.4
NC_011742:291237:329559329559330413855Escherichia coli S88 chromosome, complete genomeAraC family transcriptional regulator6e-1582
NC_008563:318993:341784341784342638855Escherichia coli APEC O1, complete genomeputative DNA-binding transcriptional regulator6e-1582
NC_007946:289425:340143340143341048906Escherichia coli UTI89, complete genomehypothetical transcriptional regulator YkgD6e-1582
NC_010473:279948:295001295001295855855Escherichia coli str. K-12 substr. DH10B, complete genomepredicted DNA-binding transcriptional regulator1e-1481.3
NC_000913:303719:319451319451320305855Escherichia coli K12, complete genomepredicted DNA-binding transcriptional regulator1e-1481.3
AC_000091:303719:319451319451320305855Escherichia coli W3110 DNA, complete genomepredicted DNA-binding transcriptional regulator1e-1481.3
NC_012947:3487392:349167534916753492529855Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeAraC family transcriptional regulator1e-1481.3
NC_008253:334467:396889396889397743855Escherichia coli 536, complete genomeputative transcriptional regulator, AraC family protein8e-1581.3
NC_011415:351810:354308354308355162855Escherichia coli SE11 chromosome, complete genomeputative transcriptional regulator1e-1480.9
NC_009800:349592:370824370824371678855Escherichia coli HS, complete genometranscriptional regulator, AraC family1e-1480.9
NC_016887:511034:514844514844515677834Nocardia cyriacigeorgica GUH-2, complete genomeputative transcriptional regulator1e-1480.9
NC_004431:364000:404671404671405576906Escherichia coli CFT073, complete genomeHypothetical transcriptional regulator ykgD1e-1480.5
NC_007508:689046:7093377093377104041068Xanthomonas campestris pv. vesicatoria str. 85-10, complete genometranscriptional regulator, AraC family3e-1479.7
NC_008314:1955793:196831019683101969236927Ralstonia eutropha H16 chromosome 2, complete sequencetranscriptional regulator, AraC-family2e-1479.7
NC_009659:1050532:108259910825991083525927Janthinobacterium sp. Marseille chromosome, complete genometranscriptional regulator5e-1479
NC_014931:1044313:1051921105192110530631143Variovorax paradoxus EPS chromosome, complete genometranscriptional regulator, AraC family6e-1478.6
NC_007912:4579873:458743345874334587807375Saccharophagus degradans 2-40, complete genomeGGDEF7e-1478.2
NC_015856:1:201942019421126933Collimonas fungivorans Ter331 chromosome, complete genomeAraC family transcriptional regulator1e-1274.3
NC_016582:9911497:991482899148289915778951Streptomyces bingchenggensis BCW-1 chromosome, complete genomeAraC-type DNA-binding domain-containing protein-like protein2e-1273.6
NC_015953:6212366:623823262382326239215984Streptomyces sp. SirexAA-E chromosome, complete genomeAraC family transcriptional regulator3e-1273.2
NC_013131:9711508:972958497295849730576993Catenulispora acidiphila DSM 44928, complete genometranscriptional regulator, AraC family1e-1171.2
NC_009656:115390:122819122819123664846Pseudomonas aeruginosa PA7 chromosome, complete genomeAraC family transcriptional regulator3e-1169.3
NC_015186:2165628:217739421773942178152759Acidiphilium multivorum AIU301, complete genomeAraC family transcriptional regulator1e-1067.4
NC_014640:3808639:380863938086393809583945Achromobacter xylosoxidans A8 chromosome, complete genomeAraC family transcriptional regulator3e-1066.2
NC_009659:1050532:108859710885971089568972Janthinobacterium sp. Marseille chromosome, complete genomeAraC family transcriptional regulator2e-0963.9
NC_009664:4423829:4599502459950246005301029Kineococcus radiotolerans SRS30216, complete genomehelix-turn-helix- domain containing protein AraC type6e-0962
NC_011000:2831183:283118328311832832142960Burkholderia cenocepacia J2315 chromosome 1, complete sequenceAraC family regulatory protein1e-0860.8
NC_014008:669170:679249679249680019771Coraliomargarita akajimensis DSM 45221 chromosome, complete genometranscriptional regulator, AraC family1e-0860.8
NC_011071:1178423:119260511926051193504900Stenotrophomonas maltophilia R551-3, complete genometranscriptional regulator, AraC family2e-0860.1
NC_009901:1516340:152282915228291523641813Shewanella pealeana ATCC 700345, complete genometranscriptional regulator, AraC family5e-0858.9
NC_010334:1561691:156771815677181568530813Shewanella halifaxensis HAW-EB4, complete genometranscriptional regulator, AraC family5e-0858.9
NC_012881:2957309:297100529710052971886882Desulfovibrio salexigens DSM 2638, complete genometranscriptional regulator, AraC family8e-0858.2
NC_010501:3013103:302473330247333025197465Pseudomonas putida W619, complete genometranscriptional regulator, AraC family9e-0858.2
NC_010501:3448389:346606534660653466964900Pseudomonas putida W619, complete genometranscriptional regulator, AraC family2e-0757.4
NC_010681:1234500:125113612511361252074939Burkholderia phytofirmans PsJN chromosome 1, complete sequencetranscriptional regulator, AraC family2e-0756.6
NC_016627:1485799:152182415218241522717894Clostridium clariflavum DSM 19732 chromosome, complete genomeDNA-binding domain-containing protein3e-0756.2
NC_014933:1759729:178259217825921783479888Bacteroides helcogenes P 36-108 chromosome, complete genometranscriptional regulator, AraC family7e-0755.1
NC_010681:934374:935470935470936000531Burkholderia phytofirmans PsJN chromosome 1, complete sequencetranscriptional regulator, AraC family9e-0754.7
NC_015732:3105649:310866331086633109505843Spirochaeta caldaria DSM 7334 chromosome, complete genomeAraC family transcriptional regulator1e-0654.3
NC_014206:3391352:3391352339135233929441593Geobacillus sp. C56-T3 chromosome, complete genomeAraC family transcriptional regulator2e-0653.5
NC_014217:4550544:456353645635364564432897Starkeya novella DSM 506 chromosome, complete genometranscriptional regulator, AraC family2e-0653.5
NC_015690:1542061:156474015647401565588849Paenibacillus mucilaginosus KNP414 chromosome, complete genomeAraC family transcriptional regulator3e-0653.1
NC_007952:3283394:330337633033763304356981Burkholderia xenovorans LB400 chromosome 2, complete sequenceTranscriptional regulator, AraC family3e-0653.1
NC_016935:2069562:209206820920682092916849Paenibacillus mucilaginosus 3016 chromosome, complete genomeAraC family transcriptional regulator3e-0652.8
NC_014323:3976351:4011751401175140127581008Herbaspirillum seropedicae SmR1 chromosome, complete genomeAraC family transcription regulator protein4e-0652.4
NC_004369:531579:558983558983559948966Corynebacterium efficiens YS-314, complete genomehypothetical protein5e-0652.4
NC_012912:4071859:408833840883384089192855Dickeya zeae Ech1591, complete genometranscriptional regulator, AraC family7e-0651.6
NC_010623:188143:192872192872193870999Burkholderia phymatum STM815 chromosome 2, complete sequencetranscriptional regulator, AraC family9e-0651.2