Pre_GI Gene

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Host: NC_007912 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_007912:4579873 Saccharophagus degradans 2-40, complete genome

Host Lineage: Saccharophagus degradans; Saccharophagus; Alteromonadaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is a marine gamma-proteobacterium that was isolated from decaying Spartina alterniflora, a salt marsh cord grass, in the Chesapeake Bay, USA. Saccharophagus degradans 2-40 has been used to produce ethanol from plant material and may be useful for the production bioethanol. Bacterium able to degrade complex carbohydrates. Saccharophagus degradans is capable of degrading insoluble complex carbohydrates through the collective action of enzyme complexes found on its cell surfaces, utilizing the degradation products as a carbon source. This organism may be useful in bioremediation. The degradative enzymes this organism produces are typically exoenzymes that are collected and organized into large surface complexes termed cellulosomes.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
457987345834333561Methionine biosynthesis MetWQuickGO ontologyBLASTP
458385445850111158AraC-type DNA-binding domain-containing proteins-likeQuickGO ontologyBLASTP
45854354586199765Ham1-like proteinQuickGO ontologyBLASTP
45863224586786465GGDEFQuickGO ontology
45874334587807375GGDEFQuickGO ontologyBLASTP
458808245900791998hypothetical protein
459015545926472493Putative oxygen-independent coproporphyrinogen III oxidaseQuickGO ontologyBLASTP
45928294593707879histidine kinaseQuickGO ontologyBLASTP
459385545948951041hypothetical proteinBLASTP
45949864595204219hypothetical protein
45958704596685816ThioredoxinQuickGO ontologyBLASTP
45967154597263549Transcription termination factor RhoQuickGO ontologyBLASTP
45974774598145669Carboxylyase-related proteinQuickGO ontologyBLASTP
45981654598551387putative heat shock proteinQuickGO ontologyBLASTP
45986464599539894heat shock protein HSP33QuickGO ontologyBLASTP
45996684600150483putative chemotaxis proteinQuickGO ontology