Pre_GI Gene

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Host: NC_015761 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_015761:520858 Salmonella bongori NCTC 12419, complete genome

Host Lineage: Salmonella bongori; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella bongori is the second species of Salmonella after Salmonella enterica and is considered a distant outgroup. This species is reptile-specific, is rarely found in human infections and it lacks SPI-2. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
520858521580723hypothetical proteinBLASTP
521583522077495peptidyl-prolyl cis-trans isomerase BQuickGO ontologyBLASTP
5222515236361386cysteinyl-tRNA synthetaseQuickGO ontologyBLASTP
523746523958213hypothetical proteinBLASTP
523960524826867bifunctional methylenetetrahydrofolate dehydrogenasemethenyltetrahydrofolate cyclohydrolaseQuickGO ontologyBLASTP
526549526815267transposaseQuickGO ontologyBLASTP
526896527648753transposaseQuickGO ontologyBLASTP
5280245291271104O-antigen polymeraseQuickGO ontologyBLASTP
5309695320271059acyltransferaseQuickGO ontologyBLASTP
533068533334267transposaseQuickGO ontologyBLASTP
533868534722855araC family transcriptional regulatorQuickGO ontologyBLASTP
5349375362621326pyridine nucleotide-disulfide oxidoreductaseQuickGO ontologyBLASTP
536420536656237hypothetical proteinBLASTP
536668537228561hypothetical proteinBLASTP
5373245384991176hypothetical proteinBLASTP
5388255402191395phenylalanine-specific permeaseQuickGO ontologyBLASTP
5402615415081248hypothetical proteinBLASTP