Pre_GI: BLASTP Hits

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Query: NC_001263:243000:248513 Deinococcus radiodurans R1 chromosome 1, complete sequence

Start: 248513, End: 249634, Length: 1122

Host Lineage: Deinococcus radiodurans; Deinococcus; Deinococcaceae; Deinococcales; Deinococcus-Thermus; Bacteria

General Information: This red-pigmented organism's name means "strange berry that withstands radiation", marking the fact that this organism is one of the most radiation-resistant known. It can tolerate radiation levels at 1000 times the levels that would kill a human and it was originally isolated in 1956 from a can of meat that had been irradiated with X-rays. The resistance to radiation may reflect its resistance to dessication, which also causes DNA damage. This organism may be of use in cleaning up toxic metals found at nuclear weapons production sites due to the radiation resistance. This bacterium is also a highly efficient transformer, and can readily take up exogenous DNA from the environment, which may also aid DNA repair. This organism carries multiple copies of many DNA repair genes, suggesting a robust system for dealing with DNA damage. The recombination system may rely on multiple copies of various repeat elements found throughout the genome.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008025:1799106:1819702181970218208171116Deinococcus geothermalis DSM 11300, complete genomeprotein of unknown function UPF01181e-97356
NC_011830:3786173:3799949379994938009831035Desulfitobacterium hafniense DCB-2, complete genomeprotein of unknown function UPF01183e-1376.6
NC_016627:3295008:3309705330970533107541050Clostridium clariflavum DSM 19732 chromosome, complete genomeputative permease3e-1376.3
NC_004193:375416:4176364176364187871152Oceanobacillus iheyensis HTE831, complete genomehypothetical protein5e-1272.4
NC_018515:989616:99944399944310004741032Desulfosporosinus meridiei DSM 13257 chromosome, complete genomepermease5e-1272.4
NC_009719:3532587:3565121356512135662181098Parvibaculum lavamentivorans DS-1 chromosome, complete genomehypothetical protein6e-1272
NC_009881:896007:8960078960078970621056Rickettsia akari str. Hartford, complete genomehypothetical protein7e-1272
NC_007940:669143:6691436691436701981056Rickettsia bellii RML369-C, complete genomePermease PerM-like protein9e-1271.6
NC_009883:641491:6414916414916425461056Rickettsia bellii OSU 85-389, complete genomePermease PerM-like protein9e-1271.6
NC_016931:513662:5379585379585390131056Rickettsia massiliae str. AZT80 chromosome, complete genomepermease PerM-like protein1e-1170.9
NC_011772:3259483:3260669326066932617901122Bacillus cereus G9842, complete genomemembrane protein YubA2e-1170.9
NC_011725:3231859:3233046323304632341671122Bacillus cereus B4264 chromosome, complete genomehypothetical protein2e-1170.5
NC_004722:3303264:3304451330445133055721122Bacillus cereus ATCC 14579, complete genomehypothetical Membrane Spanning Protein2e-1170.5
NC_009332:1028179:1028179102817910293601182Streptococcus pyogenes str. Manfredo chromosome, complete genomehypothetical protein3e-1170.1
NC_008021:803777:8195338195338207141182Streptococcus pyogenes MGAS9429, complete genomehypothetical membrane spanning protein3e-1170.1
NC_007530:4176462:4196151419615141972181068Bacillus anthracis str. 'Ames Ancestor', complete genomehypothetical protein5e-1169.3
NC_005957:4169610:4185310418531041863771068Bacillus thuringiensis serovar konkukian str. 97-27, completeprobable membrane protein5e-1169.3
NC_014335:4113154:4127842412784241289091068Bacillus cereus biovar anthracis str. CI chromosome, completemembrane protein5e-1169.3
NC_006322:3198829:3216386321638632174951110Bacillus licheniformis ATCC 14580, complete genomeYueF4e-1169.3
NC_007576:471500:4896144896144908471234Lactobacillus sakei subsp. sakei 23K, complete genomePutative transport protein7e-1168.6
NC_007517:2241104:2302120230212023032261107Geobacter metallireducens GS-15, complete genomehypothetical protein7e-1168.6
NC_011772:4321117:4334169433416943352361068Bacillus cereus G9842, complete genomehypothetical protein8e-1168.6
NC_014328:1307490:1312292131229213133201029Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative permease9e-1168.2
NC_014363:480049:4848044848044861111308Olsenella uli DSM 7084 chromosome, complete genomeprotein of unknown function UPF01181e-1067.8
NC_016109:8256000:8262689826268982638041116Kitasatospora setae KM-6054, complete genomehypothetical protein1e-1067.8
NC_009338:5161886:5161886516188651630701185Mycobacterium gilvum PYR-GCK chromosome, complete genomehypothetical protein1e-1067.8
NC_010184:4219257:4232601423260142336681068Bacillus weihenstephanensis KBAB4, complete genomeprotein of unknown function UPF01181e-1067.4
NC_011658:3144000:3144737314473731458581122Bacillus cereus AH187 chromosome, complete genomemembrane protein YubA2e-1067
NC_017200:3221508:3223260322326032243811122Bacillus thuringiensis serovar finitimus YBT-020 chromosome,hypothetical protein2e-1067
NC_016771:3097173:3098951309895131000811131Bacillus cereus NC7401, complete genomehypothetical protein2e-1067
NC_011969:3106500:3106989310698931081191131Bacillus cereus Q1 chromosome, complete genomehypothetical protein2e-1067
NC_017051:801488:8014888014888025431056Rickettsia prowazekii str. Dachau chromosome, complete genomepermease PerM3e-1066.2
NC_017049:801469:8014698014698025241056Rickettsia prowazekii str. Chernikova chromosome, complete genomepermease PerM3e-1066.2
NC_000963:803435:8034358034358044901056Rickettsia prowazekii str. Madrid E, complete genomePUTATIVE PERMEASE PERM HOMOLOG (perM)3e-1066.2
NC_017048:33578:3357833578346331056Rickettsia prowazekii str. GvV257 chromosome, complete genomepermease PerM4e-1066.2
NC_014752:1063506:1080381108038110814511071Neisseria lactamica ST-640, complete genomeintegral membrane protein5e-1065.9
NC_011035:829945:8319978319978330761080Neisseria gonorrhoeae NCCP11945 chromosome, complete genomeTransporter, putative8e-1065.1
NC_010120:1065833:1084593108459310856631071Neisseria meningitidis 053442, complete genometransporter, putative9e-1064.7
NC_009952:749426:7494267494267505111086Dinoroseobacter shibae DFL 12, complete genomeprotein of unknown function UPF01183e-0963.2
NC_010610:1580483:1593975159397515950841110Lactobacillus fermentum IFO 3956, complete genomehypothetical protein3e-0963.2
NC_018750:3859127:3875447387544738765051059Streptomyces venezuelae ATCC 10712, complete genomeputative integral membrane protein4e-0962.8
NC_015499:309394:3272913272913283761086Thermodesulfobium narugense DSM 14796 chromosome, complete genomeprotein of unknown function UPF01185e-0962.4
NC_016894:3329562:3329562332956233307941233Acetobacterium woodii DSM 1030 chromosome, complete genomehypothetical protein6e-0962
NC_009485:3579323:3587480358748035885921113Bradyrhizobium sp. BTAi1 chromosome, complete genomehypothetical protein7e-0962
NC_003030:1811820:1825727182572718267521026Clostridium acetobutylicum ATCC 824, complete genomePredicted permease1e-0861.2
NC_015687:1811573:1827327182732718283521026Clostridium acetobutylicum DSM 1731 chromosome, complete genomepermease1e-0861.2
NC_017295:1809386:1825140182514018261651026Clostridium acetobutylicum EA 2018 chromosome, complete genomepermease1e-0861.2
NC_008344:2374761:2402552240255224036431092Nitrosomonas eutropha C91, complete genomeprotein of unknown function UPF01183e-0860.1
NC_007951:570500:5760005760005771511152Burkholderia xenovorans LB400 chromosome 1, complete sequencehypothetical protein6e-0858.9
NC_017200:4191963:4206928420692842079951068Bacillus thuringiensis serovar finitimus YBT-020 chromosome,membrane protein7e-0858.5
NC_020302:1074120:1079373107937310808931521Corynebacterium halotolerans YIM 70093 = DSM 44683, completehypothetical protein9e-0858.2
NC_011969:4065460:4082290408229040833571068Bacillus cereus Q1 chromosome, complete genomehypothetical protein9e-0858.2
NC_011658:4171237:4186930418693041879971068Bacillus cereus AH187 chromosome, complete genomehypothetical protein9e-0858.2
NC_013131:7530000:7531728753172875329121185Catenulispora acidiphila DSM 44928, complete genomeprotein of unknown function UPF01181e-0757.8
NC_009483:739010:7555787555787566241047Geobacter uraniireducens Rf4 chromosome, complete genomehypothetical protein2e-0757
NC_009699:2733529:2750996275099627520241029Clostridium botulinum F str. Langeland chromosome, complete genomehypothetical protein2e-0757
NC_017066:811565:8115658115658126201056Rickettsia typhi str. TH1527 chromosome, complete genomepermease2e-0756.6
NC_017062:812133:8121338121338131881056Rickettsia typhi str. B9991CWPP chromosome, complete genomepermease2e-0756.6
NC_006142:811469:8114698114698125241056Rickettsia typhi str. Wilmington, complete genomepossible permease2e-0756.6
NC_014657:1193985:1202003120200312030671065Caldicellulosiruptor owensensis OL chromosome, complete genomehypothetical protein4e-0756.2
NC_009495:2685646:2703035270303527040631029Clostridium botulinum A str. ATCC 3502 chromosome, complete genomehypothetical protein4e-0755.8
NC_015311:2626850:2629506262950626305851080Prevotella denticola F0289 chromosome, complete genomehypothetical protein6e-0755.5
NC_019748:763011:7751587751587761711014Stanieria cyanosphaera PCC 7437, complete genomeprotein of unknown function UPF01181e-0654.3
NC_007907:2879568:2906882290688229079941113Desulfitobacterium hafniense Y51, complete genomehypothetical protein2e-0653.9
NC_012704:696374:6963746963746977351362Corynebacterium kroppenstedtii DSM 44385, complete genomehypothetical protein2e-0653.9
NC_010511:3947948:3964158396415839661011944Methylobacterium sp. 4-46 chromosome, complete genomehypothetical protein2e-0653.5
NC_008262:654000:6547196547196558191101Clostridium perfringens SM101, complete genomemembrane proteins-like protein lmo0908, putative4e-0652.8
NC_002678:3701500:3740956374095637429441989Mesorhizobium loti MAFF303099, complete genomeintegral membrane transport protein5e-0652.8
NC_008261:676000:6767286767286778281101Clostridium perfringens ATCC 13124, complete genomehypothetical protein7e-0652
NC_003366:728859:7293637293637304631101Clostridium perfringens str. 13, complete genomeprobable permease8e-0652