Pre_GI Gene

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Host: NC_017066 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_017066:811565 Rickettsia typhi str. TH1527 chromosome, complete genome

Host Lineage: Rickettsia typhi; Rickettsia; Rickettsiaceae; Rickettsiales; Proteobacteria; Bacteria

General Information: This genus, like other Rickettsial organisms such as Neorickettsia and Anaplasma, is composed of obligate intracellular pathogens. The latter is composed of two organisms, Rickettsia prowazekii and Rickettsia typhi. The bacteria are transmitted via an insect, usually a tick, to a host organism, in this case humans, where they target endothelial cells and sometimes macrophages. They attach via an adhesin, rickettsial outer membrane protein A, and are internalized where they persist as cytoplasmically free organisms. Transovarial transmission (from mother to offspring) occurs in the invertebrate host. This organism causes murine typhus and is an obligate intracellular pathogen that infects both the flea vector and hosts such as human, rat, and mouse. R. prowazekii, and genomic comparisons demonstrate colinearity and similarity to the genome of that organism except for two independent inversions near the origin and terminus. In the flea vector, the bacterium penetrates the gut epithelial barrier and is found in the feces which become infective.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
8115658126201056permeaseQuickGO ontologyBLASTP
812635813300666hypothetical proteinBLASTP
814022814255234hypothetical proteinBLASTP
81460581468076tRNA-ValQuickGO ontologyBLASTP
81474981502127330S ribosomal protein S20QuickGO ontologyBLASTP
81504181545441450S ribosomal protein L17QuickGO ontologyBLASTP
8154678164891023DNA-directed RNA polymerase subunit alphaQuickGO ontologyBLASTP
81650881689138430S ribosomal protein S11QuickGO ontologyBLASTP
81691781729437830S ribosomal protein S13QuickGO ontologyBLASTP
817352817993642adenylate kinaseQuickGO ontologyBLASTP
8180098193101302preprotein translocase subunit SecYQuickGO ontologyBLASTP
81931581976745350S ribosomal protein L15QuickGO ontologyBLASTP
81978181997219250S ribosomal protein L30QuickGO ontologyBLASTP
82001082053752830S ribosomal protein S5QuickGO ontologyBLASTP
82055482091035750S ribosomal protein L18QuickGO ontologyBLASTP
82092682145953450S ribosomal protein L6QuickGO ontologyBLASTP
82146882186639930S ribosomal protein S8QuickGO ontologyBLASTP
82188582219030630S ribosomal protein S14QuickGO ontologyBLASTP
82220882274754050S ribosomal protein L5QuickGO ontologyBLASTP
82273482307534250S ribosomal protein L24QuickGO ontologyBLASTP
82307282344036950S ribosomal protein L14QuickGO ontologyBLASTP
82350182373423430S ribosomal protein S17QuickGO ontologyBLASTP
82373682395121650S ribosomal protein L29QuickGO ontologyBLASTP
82394482435441150S ribosomal protein L16QuickGO ontologyBLASTP
82436982502265430S ribosomal protein S3QuickGO ontologyBLASTP
82502482538336050S ribosomal protein L22QuickGO ontologyBLASTP
82539282567027930S ribosomal protein S19QuickGO ontologyBLASTP
82569582651682250S ribosomal protein L2QuickGO ontologyBLASTP
82651782681329750S ribosomal protein L23QuickGO ontologyBLASTP
82681082743362450S ribosomal protein L4QuickGO ontologyBLASTP
82767382832064850S ribosomal protein L3QuickGO ontologyBLASTP
82832182863831830S ribosomal protein S10QuickGO ontologyBLASTP
8287328299161185elongation factor TuQuickGO ontologyBLASTP
83016883025386tRNA-TyrQuickGO ontologyBLASTP
830437831165729tRNArRNA methyltransferaseQuickGO ontologyBLASTP
8316468330311386fumarate hydrataseQuickGO ontologyBLASTP
8333848347421359cell division protein FtsZQuickGO ontologyBLASTP
835399835971573hypothetical proteinBLASTP
836011836835825murein peptide permease protein AmpGQuickGO ontologyBLASTP