Pre_GI Gene

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Host: NC_017062 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_017062:812133 Rickettsia typhi str. B9991CWPP chromosome, complete genome

Host Lineage: Rickettsia typhi; Rickettsia; Rickettsiaceae; Rickettsiales; Proteobacteria; Bacteria

General Information: This genus, like other Rickettsial organisms such as Neorickettsia and Anaplasma, is composed of obligate intracellular pathogens. The latter is composed of two organisms, Rickettsia prowazekii and Rickettsia typhi. The bacteria are transmitted via an insect, usually a tick, to a host organism, in this case humans, where they target endothelial cells and sometimes macrophages. They attach via an adhesin, rickettsial outer membrane protein A, and are internalized where they persist as cytoplasmically free organisms. Transovarial transmission (from mother to offspring) occurs in the invertebrate host. This organism causes murine typhus and is an obligate intracellular pathogen that infects both the flea vector and hosts such as human, rat, and mouse. R. prowazekii, and genomic comparisons demonstrate colinearity and similarity to the genome of that organism except for two independent inversions near the origin and terminus. In the flea vector, the bacterium penetrates the gut epithelial barrier and is found in the feces which become infective.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
8121338131881056permeaseQuickGO ontologyBLASTP
813203813868666hypothetical proteinBLASTP
814590814823234hypothetical proteinBLASTP
81517381524876tRNA-ValQuickGO ontologyBLASTP
81531781558927330S ribosomal protein S20QuickGO ontologyBLASTP
81560981602241450S ribosomal protein L17QuickGO ontologyBLASTP
8160358170571023DNA-directed RNA polymerase subunit alphaQuickGO ontologyBLASTP
81707681745938430S ribosomal protein S11QuickGO ontologyBLASTP
81748581786237830S ribosomal protein S13QuickGO ontologyBLASTP
817920818561642adenylate kinaseQuickGO ontologyBLASTP
8185778198781302preprotein translocase subunit SecYQuickGO ontologyBLASTP
81988382033545350S ribosomal protein L15QuickGO ontologyBLASTP
82034982054019250S ribosomal protein L30QuickGO ontologyBLASTP
82057882110552830S ribosomal protein S5QuickGO ontologyBLASTP
82112282147835750S ribosomal protein L18QuickGO ontologyBLASTP
82149482202753450S ribosomal protein L6QuickGO ontologyBLASTP
82203682243439930S ribosomal protein S8QuickGO ontologyBLASTP
82245382275830630S ribosomal protein S14QuickGO ontologyBLASTP
82277682331554050S ribosomal protein L5QuickGO ontologyBLASTP
82330282364334250S ribosomal protein L24QuickGO ontologyBLASTP
82364082400836950S ribosomal protein L14QuickGO ontologyBLASTP
82406982430223430S ribosomal protein S17QuickGO ontologyBLASTP
82430482451921650S ribosomal protein L29QuickGO ontologyBLASTP
82451282492241150S ribosomal protein L16QuickGO ontologyBLASTP
82493782559065430S ribosomal protein S3QuickGO ontologyBLASTP
82559282595136050S ribosomal protein L22QuickGO ontologyBLASTP
82596082623827930S ribosomal protein S19QuickGO ontologyBLASTP
82626382708482250S ribosomal protein L2QuickGO ontologyBLASTP
82708582738129750S ribosomal protein L23QuickGO ontologyBLASTP
82737882800162450S ribosomal protein L4QuickGO ontologyBLASTP
82824182888864850S ribosomal protein L3QuickGO ontologyBLASTP
82888982920631830S ribosomal protein S10QuickGO ontologyBLASTP
8293008304841185elongation factor TuQuickGO ontologyBLASTP
83073683082186tRNA-TyrQuickGO ontologyBLASTP
831005831733729tRNArRNA methyltransferaseQuickGO ontologyBLASTP
8322148335991386fumarate hydrataseQuickGO ontologyBLASTP
8339528353101359cell division protein FtsZQuickGO ontologyBLASTP
835967836539573hypothetical proteinBLASTP
836579837424846murein peptide permease protein AmpGQuickGO ontologyBLASTP
8378868391091224ATP-dependent RNA helicase RhlEQuickGO ontologyBLASTP