Pre_GI Gene

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Host: NC_006142 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_006142:811469 Rickettsia typhi str. Wilmington, complete genome

Host Lineage: Rickettsia typhi; Rickettsia; Rickettsiaceae; Rickettsiales; Proteobacteria; Bacteria

General Information: This genus, like other Rickettsial organisms such as Neorickettsia and Anaplasma, is composed of obligate intracellular pathogens. The latter is composed of two organisms, Rickettsia prowazekii and Rickettsia typhi. The bacteria are transmitted via an insect, usually a tick, to a host organism, in this case humans, where they target endothelial cells and sometimes macrophages. They attach via an adhesin, rickettsial outer membrane protein A, and are internalized where they persist as cytoplasmically free organisms. Transovarial transmission (from mother to offspring) occurs in the invertebrate host. Rickettsia typhi causes murine typhus and is an obligate intracellular pathogen that infects both the flea vector and hosts such as human, rat, and mouse. In the flea vector, the bacterium penetrates the gut epithelial barrier and is found in the feces which become infective.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
8114698125241056possible permeaseQuickGO ontologyBLASTP
812539813204666hypothetical proteinBLASTP
813926814159234rickettsial conserved hypothetical proteinQuickGO ontologyBLASTP
81450981458476tRNA-ValQuickGO ontologyBLASTP
81465381492527330S ribosomal protein S20QuickGO ontologyBLASTP
81494581535841450S ribosomal protein L17QuickGO ontologyBLASTP
8153718163931023DNA-directed RNA polymerase alpha subunitQuickGO ontologyBLASTP
81641281679538430S ribosomal protein S11QuickGO ontologyBLASTP
81682181719837830S ribosomal protein S13QuickGO ontologyBLASTP
817256817897642adenylate kinaseQuickGO ontologyBLASTP
8179138192141302preprotein translocase SecYQuickGO ontologyBLASTP
81921981967145350S ribosomal protein L15QuickGO ontologyBLASTP
81968581987619250S ribosomal protein L30QuickGO ontologyBLASTP
81991482044152830S ribosomal protein S5QuickGO ontologyBLASTP
82045882081435750S ribosomal protein L18QuickGO ontologyBLASTP
82083082136353450S ribosomal protein L6QuickGO ontologyBLASTP
82137282177039930S ribosomal protein S8QuickGO ontologyBLASTP
82178982209430630S ribosomal protein S14QuickGO ontologyBLASTP
82211282265154050S ribosomal protein L5QuickGO ontologyBLASTP
82263882297934250S ribosomal protein L24QuickGO ontologyBLASTP
82297682334436950S ribosomal protein L14QuickGO ontologyBLASTP
82340582365324930S ribosomal protein S17QuickGO ontologyBLASTP
82364082385521650S ribosomal protein L29QuickGO ontologyBLASTP
82384882425841150S ribosomal protein L16QuickGO ontologyBLASTP
82427382492665430S ribosomal protein S3QuickGO ontologyBLASTP
82492882528736050S ribosomal protein L22QuickGO ontologyBLASTP
82529682557427930S ribosomal protein S19QuickGO ontologyBLASTP
82559982642082250S ribosomal protein L2QuickGO ontologyBLASTP
82642182671729750S ribosomal protein L23QuickGO ontologyBLASTP
82671482733762450S ribosomal protein L4QuickGO ontologyBLASTP
82757782822464850S ribosomal protein L3QuickGO ontologyBLASTP
82822582854231830S ribosomal protein S10QuickGO ontologyBLASTP
8286368298201185elongation factor TuQuickGO ontologyBLASTP
82990382997674tRNA-GlyQuickGO ontologyBLASTP
83007283015786tRNA-TyrQuickGO ontologyBLASTP
830323831069747tRNArRNA methyltransferaseQuickGO ontologyBLASTP
8315508329351386fumarate hydrataseQuickGO ontologyBLASTP
8332888346461359cell division protein FtsZQuickGO ontologyBLASTP
835303835875573hypothetical proteinBLASTP
8359158371411227murein peptide permease protein AmpGQuickGO ontologyBLASTP