Pre_GI Gene

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Host: NC_010610 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010610:1580483 Lactobacillus fermentum IFO 3956, complete genome

Host Lineage: Lactobacillus fermentum; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. This probiotic species has been associated with active caries lesions.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
158048315817241242hypothetical proteinBLASTP
15820331582176144hypothetical protein
15823671583065699hypothetical protein
15830781583938861ABC transporter ATP-binding componentQuickGO ontologyBLASTP
15839251584302378transcriptional regulatorQuickGO ontologyBLASTP
15844121585344933dTDP-glucose 46-dehydrataseQuickGO ontologyBLASTP
15854381586391954glycosyltransferaseQuickGO ontologyBLASTP
158660215882781677hypothetical proteinBLASTP
158833615899161581peptide chain release factor 3QuickGO ontologyBLASTP
15900171590964948glycosyltransferaseQuickGO ontologyBLASTP
159097415927521779hypothetical proteinBLASTP
15928231593803981glycosyltransferaseQuickGO ontologyBLASTP
159397515950841110hypothetical proteinBLASTP
15950841596016933glycosyltransferaseQuickGO ontologyBLASTP
159681115982231413hypothetical proteinBLASTP
16008321601134303hypothetical proteinBLASTP
16011581601994837transposaseQuickGO ontologyBLASTP
160248016035711092putative O-acetyltransferaseQuickGO ontologyBLASTP
160359416045981005glycosyltransferaseQuickGO ontologyBLASTP
160460716060371431hypothetical proteinBLASTP
160604016071611122UDP-galactopyranose mutaseQuickGO ontologyBLASTP
160730016083611062UDP-D-galactoseglucosyllipopolysaccharide-1 6-D-galactosyltransferaseQuickGO ontologyBLASTP
160956616105821017transposaseQuickGO ontologyBLASTP
161234616135661221transposaseQuickGO ontologyBLASTP
16136431614521879transposaseQuickGO ontologyBLASTP
16145451614847303hypothetical proteinBLASTP
16161661616915750hypothetical proteinBLASTP
161689916181731275hypothetical proteinBLASTP
16181331618894762glycosyltransferaseQuickGO ontologyBLASTP
16189061619580675glycosyltransferaseQuickGO ontologyBLASTP
16197291620547819hypothetical proteinBLASTP
16206411620847207hypothetical protein
16208831621098216hypothetical protein
16212791622205927hypothetical proteinBLASTP
162230416252432940hypothetical proteinBLASTP
16254001626257858methionine aminopeptidaseQuickGO ontologyBLASTP
16263701626816447flavodoxinQuickGO ontologyBLASTP
16268261627260435teichoic acid glycosylation proteinQuickGO ontologyBLASTP
1627784162785673tRNA-ArgQuickGO ontology
162791616292441329ATP-dependent RNA helicaseQuickGO ontologyBLASTP